EY665055

Overview
NameEY665055
Unique NameEY665055
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length903
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY665055 vs. ExPASy Swiss-Prot
Match: ABCCE_DICDI (ABC transporter C family member 14 OS=Dictyostelium discoideum GN=abcC14 PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 1.157e-11
Identity = 62/194 (31.96%), Postives = 98/194 (50.52%), Query Frame = 2
Query:   23 FVIGQIL---QNSWLAANVENP--NVSTLRLIVVYLLIG--FVSTLFLMSRSLSSVVLGIRSSKSLFSQLLNSLFRAPMSFYDSTPLGRVLSRVSSDLSIVDLDVPFSLIFAVGATTNAYSNLGVLAVV-TWQVLFVSIPVIFLAIRL-QRYYFATAKELMRLNGTTKSLVANHLAESIAGAMTIXAFEXEDXF 577
            F IGQ +    + WLA   E      S    I  YLLI   FVS L + + SLS +  GI   K+L S LL S+  A   F+D+ P GR+L+R S D S  D+D+    + +  +   +   +G++++V    ++ + + ++F+   + QR Y  +A+EL R    T S V + L E   G +TI  ++ E  F
Sbjct:  751 FFIGQAVYKVSDFWLAIWTERSIEGKSDSFYIGYYLLIIGIFVSLLMIRTYSLSRITFGI--GKNLHSALLKSVTYASCRFFDTNPSGRILNRFSKDTS--DIDIHMLDLLSEVSICFSELTIGLISIVFIIPIIIIPLTLLFIIYYIYQRLYRPSARELNRWESITLSPVFSLLQECYNGLLTIRTYKQESRF 940          
BLAST of EY665055 vs. ExPASy Swiss-Prot
Match: ABCC6_DICDI (ABC transporter C family member 6 OS=Dictyostelium discoideum GN=abcC6 PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.973e-11
Identity = 57/188 (30.32%), Postives = 93/188 (49.47%), Query Frame = 2
Query:   23 FVIGQILQNSWLAANVENPNVSTLRLIVVYLLIGFVSTLFLMSRSLSSVVLGIRSSKSLFSQLLNSLFRAPMSFYDSTPLGRVLSRVSSDLSIVDLDVPFSLIFAVGATTNAYSNLGVLAVVTWQVLFVSIPVIFLAIR---LQRYYFATAKELMRLNGTTKSLVANHLAESIAGAMTIXAFEXEDXF 577
            F +       W   ++E  + S    I  YLLI     + LM R L    +     K+L S LL S+  A   F+D+ P GR+L+R S D S +D+ + F ++  V    +  + +G++++V + +  + IP+I L+I    LQR Y  +A+EL R    T S + + L E   G +TI  ++ E  F
Sbjct:  791 FKVSDFWLTIWTERSIEGKSDSFY--IGYYLLIFGTFVVILMIRILLLCRITFNVGKNLHSALLKSVTYASCRFFDTNPSGRILNRFSKDTSDIDIHM-FDILTEVSMCFSELT-IGLISIV-FIIPIMVIPLIILSIAYYILQRLYRPSARELNRWESITVSPIFSLLQECYNGLLTIRTYKQESRF 973          
BLAST of EY665055 vs. ExPASy Swiss-Prot
Match: MDR_LEITA (Multidrug resistance protein OS=Leishmania tarentolae GN=PGPA PE=3 SV=2)

HSP 1 Score: 68.9366 bits (167), Expect = 4.395e-11
Identity = 46/153 (30.07%), Postives = 77/153 (50.33%), Query Frame = 2
Query:  101 IVVYLLIGFVSTLFLMSRSLSSVVLGIRSSKSLFSQLLNSLFRAPMSFYDSTPLGRVLSRVSSDLSIVDLDVPFSLIFAVGATTNAYSNLGVLAVVTWQVLFVSIPVIFLAIRLQRYYFATAKELMRLNGTTKSLVANHLAESIAGAMTIXAF 559
            + VYL I F+       R      L    S+++   LL S+  A MSF+D+TP+GRVL+R + D+SI+D  +    ++ +    +  S + ++ VV   VL   +P ++   +L + Y A+ +E  R+     S V   L ES+ G  TI  +
Sbjct:  977 LYVYLFIVFLEIFGSPLRFFLCYYLIRIGSRNMHRDLLESIGVARMSFFDTTPVGRVLNRFTKDMSILDNTLNDGYLYLLEYFFSMCSTVIIMVVVQPFVLVAIVPCVYSYYKLMQVYNASNRETRRIKSIAHSPVFTLLEESLQGQRTIATY 1129          
BLAST of EY665055 vs. ExPASy Swiss-Prot
Match: MRP9_MOUSE (Multidrug resistance-associated protein 9 OS=Mus musculus GN=Abcc12 PE=2 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 7.497e-11
Identity = 48/183 (26.23%), Postives = 90/183 (49.18%), Query Frame = 2
Query:   44 QNSWLAANVENPNVSTLRLI--VVYLLIGFVSTLFLMSRSLSSVVLGIRSSKSLFSQLLNSLFRAPMSFYDSTPLGRVLSRVSSDLSIVDLDVPFSLIFAVGATTNAYSNLGVLAVVTWQVLFVSIPVIFLAIRLQRYYFATAKELMRLNGTTKSLVANHLAESIAGAMTIXAFEXEDXFFCK 586
            QN+  A NV+     T   +  +VY+       +F + +  +     + +S SL +++ N + R+PMSF+D+TP GR+++R S D+  +D+ +PF     +         L ++A V   VL V   +  + + L R +    +EL ++   ++S   +H+  SI G   I A++ +D    K
Sbjct:  828 QNNKTACNVDQTLQDTKHHMYQLVYIASMVSVLMFGIIKGFTFTNTTLMASSSLHNRVFNKIVRSPMSFFDTTPTGRLMNRFSKDMDELDVRLPFHAENFLQQFFMVVFILVIMAAVFPVVLVVLAGLAVIFLILLRIFHRGVQELKQVENISRSPWFSHITSSIQGLGVIHAYDKKDDCISK 1010          
The following BLAST results are available for this feature:
BLAST of EY665055 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 104
Match NameE-valueIdentityDescription
ABCCE_DICDI1.157e-1131.96ABC transporter C family member 14 OS=Dictyosteliu... [more]
ABCC6_DICDI1.973e-1130.32ABC transporter C family member 6 OS=Dictyostelium... [more]
MDR_LEITA4.395e-1130.07Multidrug resistance protein OS=Leishmania tarento... [more]
MRP9_MOUSE7.497e-1126.23Multidrug resistance-associated protein 9 OS=Mus m... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-073-E05-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY665055 ID=EY665055; Name=EY665055; organism=Citrus sinensis; type=EST; length=903bp
AGCCAGCCTCTCTCACCTTACATTTGTGATTGGTCAGATATTGCAGAACT
CTTGGCTGGCTGCCAATGTAGAAAATCCTAATGTCAGCACATTACGGCTG
ATAGTGGTTTACTTGTTGATTGGATTTGTCTCAACACTATTCCTGATGTC
TAGATCTCTCTCTAGTGTTGTTTTAGGTATTAGATCATCAAAATCTTTGT
TCTCACAGCTTTTAAATTCCCTTTTCCGTGCACCTATGTCTTTTTACGAC
TCCACACCTCTTGGAAGGGTACTTAGTCGGGTTTCTTCTGATCTGAGTAT
TGTCGACCTAGATGTTCCATTCAGTTTAATCTTTGCTGTCGGGGCTACCA
CAAATGCTTATAGTAATCTAGGAGTACTTGCTGTTGTCACATGGCAAGTC
CTATTCGTTTCCATACCAGTGATTTTCTTGGCAATTCGCTTGCAGAGATA
CTATTTTGCTACTGCAAAAGAATTGATGCGGCTTAACGGCACAACCAAGT
CCTTGGTAGCAAATCATCTAGCTGAGTCTATAGCAGGAGCCATGACAATT
ANGGCTTTTGAGGANGAAGATCNGTTTTTTTGCAAAGAACCTTGACCTCA
TTGATACCAATGCCAGTCCTTTCTTCCAAACTTTTGCAGCAAATGAGTGG
GNTGATCCAACGCCCTAGAACACTCAGTGCAACNNTGTATATCCTCGCAG
CATTCTGTATGGTTTTGCTTNCTNCTGNAACTTTTACCCCTGNATTNATT
NGAATGGCCCTTTCTTATGGTCTTCGTTAAACAGTCCCTAGTATGTCAAT
CCAAAACAGTGTACTCTANCAATTATATCATTCTGTAAAAGACTTTACCA
TACTGCATGTACCAGTGAAGCCCTGAGTAGTAGAAACAACCGCCCCACCA
CTG
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