EY665055

Overview
NameEY665055
Unique NameEY665055
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length903
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY665055 vs. ExPASy Swiss-Prot
Match: AB2C_ARATH (ABC transporter C family member 2 OS=Arabidopsis thaliana GN=ABCC2 PE=1 SV=2)

HSP 1 Score: 84.7297 bits (208), Expect = 7.741e-16
Identity = 44/156 (28.21%), Postives = 86/156 (55.13%), Query Frame = 2
Query:  104 VVYLLIGFVSTLFLMSRSLSSVVLGIRSSKSLFSQLLNSLFRAPMSFYDSTPLGRVLSRVSSDLSIVDLDVPFSLIFAVGATTNAYSNLGVLAVVTWQVLFVSIPVIFLAIRLQRYYFATAKELMRLNGTTKSLVANHLAESIAGAMTIXAFEXED 571
            ++Y L+ F   L  ++ S   ++  + ++K L   +L+S+ RAPMSF+ + PLGR+++R + DL  +D  V   +   +G  +   S + ++ +V+   L+  +P++ L      YY  TA+E+ R++  ++S V     E++ G  TI A++  D
Sbjct:  961 LIYALLSFGQVLVTLTNSYWLIMSSLYAAKKLHDNMLHSILRAPMSFFHTNPLGRIINRFAKDLGDIDRTVAVFVNMFMGQVSQLLSTVVLIGIVSTLSLWAIMPLLVLFYGAYLYYQNTAREVKRMDSISRSPVYAQFGEALNGLSTIRAYKAYD 1116          
BLAST of EY665055 vs. ExPASy Swiss-Prot
Match: ABCC9_RAT (ATP-binding cassette transporter sub-family C member 9 OS=Rattus norvegicus GN=Abcc9 PE=2 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 1.276e-15
Identity = 52/181 (28.73%), Postives = 93/181 (51.38%), Query Frame = 2
Query:   53 WLAA-----NVENPNVSTLRLIVVYLLIGFVSTLFL-MSRSLSSVVLGIRSSKSLFSQLLNSLFRAPMSFYDSTPLGRVLSRVSSDLSIVDLDVPFSLIFAVGATTNAYSNLGVLAVVTWQVLFVSIPVIFLAIRLQRYYFATAKELMRLNGTTKSLVANHLAESIAGAMTIXAFEXEDXF 577
            WLA      ++ +P  +     V    I   + +FL +  SL+   +G+ ++K+L   LLN +   P+ F+D+TPLG +L+R S+D +I+D  +P +L     +T    S +G+++  T   L    P+      +Q+Y+   +K+L  L+ +T+  +  H +E+  G  TI AF  E  F
Sbjct: 1010 WLATWTSEYSINDPGKADQTFYVAGFSILCGAGIFLCLVTSLTVEWMGLTAAKNLHHNLLNKIILGPIRFFDTTPLGLILNRFSADTNIIDQHIPPTLESLTRSTLLCLSAIGMISYATPVFLIALAPLGVAFYFIQKYFRVASKDLQELDDSTQLPLLCHFSETAEGLTTIRAFRHETRF 1190          

HSP 2 Score: 23.483 bits (49), Expect = 1.276e-15
Identity = 11/32 (34.38%), Postives = 16/32 (50.00%), Query Frame = 3
Query:  561 RXKIXFFAKNLDLIDTNASPFFQTFAANEWXD 656
            R +  F  + L+L DTN   +    AAN W +
Sbjct: 1185 RHETRFKQRMLELTDTNNIAYLFLSAANRWLE 1216          
BLAST of EY665055 vs. ExPASy Swiss-Prot
Match: ABCC9_MOUSE (ATP-binding cassette transporter sub-family C member 9 OS=Mus musculus GN=Abcc9 PE=1 SV=2)

HSP 1 Score: 80.4925 bits (197), Expect = 1.659e-15
Identity = 52/181 (28.73%), Postives = 93/181 (51.38%), Query Frame = 2
Query:   53 WLAA-----NVENPNVSTLRLIVVYLLIGFVSTLFL-MSRSLSSVVLGIRSSKSLFSQLLNSLFRAPMSFYDSTPLGRVLSRVSSDLSIVDLDVPFSLIFAVGATTNAYSNLGVLAVVTWQVLFVSIPVIFLAIRLQRYYFATAKELMRLNGTTKSLVANHLAESIAGAMTIXAFEXEDXF 577
            WLA      ++ +P  +     V    I   + +FL +  SL+   +G+ ++K+L   LLN +   P+ F+D+TPLG +L+R S+D +I+D  +P +L     +T    S +G+++  T   L    P+      +Q+Y+   +K+L  L+ +T+  +  H +E+  G  TI AF  E  F
Sbjct: 1011 WLATWTSEYSINHPGKADQTFYVAGFSILCGAGIFLCLVTSLTVEWMGLTAAKNLHHNLLNKIILGPIRFFDTTPLGLILNRFSADTNIIDQHIPPTLESLTRSTLLCLSAIGMISYATPVFLVALAPLGVAFYFIQKYFRVASKDLQELDDSTQLPLLCHFSETAEGLTTIRAFRHETRF 1191          

HSP 2 Score: 23.483 bits (49), Expect = 1.659e-15
Identity = 11/32 (34.38%), Postives = 16/32 (50.00%), Query Frame = 3
Query:  561 RXKIXFFAKNLDLIDTNASPFFQTFAANEWXD 656
            R +  F  + L+L DTN   +    AAN W +
Sbjct: 1186 RHETRFKQRMLELTDTNNIAYLFLSAANRWLE 1217          
BLAST of EY665055 vs. ExPASy Swiss-Prot
Match: MRP7_HUMAN (Multidrug resistance-associated protein 7 OS=Homo sapiens GN=ABCC10 PE=1 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.724e-15
Identity = 51/156 (32.69%), Postives = 93/156 (59.62%), Query Frame = 2
Query:  101 IVVYLLIGFVSTLFLMSRSLSSVVLGIRSSKSLFSQLLNSLFRAPMSFYDSTPLGRVLSRVSSDLSIVDLDVPFSLIFAVGATTNAYSNLGVLAV----VTWQVLFVSIPVIFLAIRLQRYYFATAKELMRLNGTTKSLVANHLAESIAGAMTIXA 556
            + VY  I  V++L  + R++      ++++ +L  +LL+ +  AP++F+++TP GR+L+R SSD++  D  +PF L   +    NA   LG+LAV    + W +L +  P+  +   +QR+Y A+++EL RL   T S + +HLA+++AG   + A
Sbjct:  968 LTVYATIAGVNSLCTLLRAVLFAAGTLQAAATLHRRLLHRVLMAPVTFFNATPTGRILNRFSSDVACADDSLPFILNILL---ANAAGLLGLLAVLGSGLPWLLLLLP-PLSIMYYHVQRHYRASSRELRRLGSLTLSPLYSHLADTLAGLSVLRA 1119          
BLAST of EY665055 vs. ExPASy Swiss-Prot
Match: MRP1_MOUSE (Multidrug resistance-associated protein 1 OS=Mus musculus GN=Abcc1 PE=1 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 2.941e-15
Identity = 51/190 (26.84%), Postives = 98/190 (51.58%), Query Frame = 2
Query:   29 IGQILQNSWLAANVENPNV-------STLRLIVVYLLIGFVSTLFLMSRSLSSVVLGIRSSKSLFSQLLNSLFRAPMSFYDSTPLGRVLSRVSSDLSIVDLDVPFSLIFAVGATTNAYSNLGVLAVVTWQVLFVSIPVIFLAIRLQRYYFATAKELMRLNGTTKSLVANHLAESIAGAMTIXAFEXEDXF 577
            +  +  N WL+   ++P V          RL V Y  +G +    +   S++  + GI +S+ L   LL ++ R+PMSF++ TP G +++R S +L  VD  +P  +   +G+  +    + ++ + T     +  P+  +   +QR+Y A++++L RL   ++S V +H  E++ G   I AFE ++ F
Sbjct:  983 VSALASNYWLSLWTDDPPVVNGTQANRNFRLSV-YGALGILQGAAIFGYSMAVSIGGIFASRRLHLDLLYNVLRSPMSFFERTPSGNLVNRFSKELDTVDSMIPQVIKMFMGSLFSVIGAVIIILLATPIAAVIIPPLGLVYFFVQRFYVASSRQLKRLESVSRSPVYSHFNETLLGVSVIRAFEEQERF 1171          
BLAST of EY665055 vs. ExPASy Swiss-Prot
Match: CFTR_LOXAF (Cystic fibrosis transmembrane conductance regulator OS=Loxodonta africana GN=CFTR PE=3 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 3.842e-15
Identity = 47/166 (28.31%), Postives = 91/166 (54.82%), Query Frame = 2
Query:   86 STLRLIVVYLLIGFVSTLFLMS--RSLSSVVLGIRSSKSLFSQLLNSLFRAPMSFYDSTPLGRVLSRVSSDLSIVDLDVPFSLIFAVGATTNAYSNLGVLAVVTWQVLFVSIPVIFLAIRLQRYYFATAKELMRLNGTTKSLVANHLAESIAGAMTIXAFEXEDXF 577
            +T    ++Y+ +G   +LF ++  R L  V   I+ SK+L  ++L S+ +APMS +++   GR+L+R S D++I+D  +P ++   +         + V++V+   +   ++PVI   I L+ Y+  T+++L +L    +S +  HL  S+ G  T+ AF  +  F
Sbjct:  910 NTSSYYLLYIYVGIADSLFALAIFRGLPLVHTLIKVSKTLHHKMLRSILQAPMSTFNTLKAGRILNRFSKDIAILDDLLPLTMFDFIQLLLIVIGAVVVVSVLQPYIFLATVPVIAAFIILRAYFLHTSQQLKQLESEARSPIFTHLVTSVKGLWTLRAFGRQPYF 1075          
BLAST of EY665055 vs. ExPASy Swiss-Prot
Match: MRP1_RAT (Multidrug resistance-associated protein 1 OS=Rattus norvegicus GN=Abcc1 PE=1 SV=2)

HSP 1 Score: 81.6481 bits (200), Expect = 6.553e-15
Identity = 44/157 (28.03%), Postives = 87/157 (55.41%), Query Frame = 2
Query:  107 VYLLIGFVSTLFLMSRSLSSVVLGIRSSKSLFSQLLNSLFRAPMSFYDSTPLGRVLSRVSSDLSIVDLDVPFSLIFAVGATTNAYSNLGVLAVVTWQVLFVSIPVIFLAIRLQRYYFATAKELMRLNGTTKSLVANHLAESIAGAMTIXAFEXEDXF 577
            VY  +G +  + +   S++  + GI +S+ L   LL ++ R+PMSF++ TP G +++R S +L  VD  +P  +   +G+  +    + ++ + T     +  P+  +   +QR+Y A++++L RL   ++S V +H  E++ G   I AFE ++ F
Sbjct: 1019 VYGALGILQGVAVFGYSMAVSIGGIFASRRLHLDLLQNVLRSPMSFFERTPSGNLVNRFSKELDTVDSMIPQVIKMFMGSLFSVIGAVIIILLATPIAAVIIPPLGLVYFFVQRFYVASSRQLKRLESVSRSPVYSHFNETLLGVSVIRAFEEQERF 1175          
BLAST of EY665055 vs. ExPASy Swiss-Prot
Match: AB12C_ARATH (ABC transporter C family member 12 OS=Arabidopsis thaliana GN=ABCC12 PE=2 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 6.553e-15
Identity = 48/189 (25.40%), Postives = 95/189 (50.26%), Query Frame = 2
Query:   14 HLTFVIGQILQNSWLAANVE---NPNVSTLRLIVVYLLIGFVSTLFLMSRSLSSVVLGIRSSKSLFSQLLNSLFRAPMSFYDSTPLGRVLSRVSSDLSIVDLDVPFSLIFAVGATTNAYSNLGVLAVVTWQVLFVSIPVIFLAIRLQRYYFATAKELMRLNGTTKSLVANHLAESIAGAMTIXAFEXED 571
            +L   + ++  ++WL+   +   + N S    IVVY L+GF       + S   +   + +++ L   +L+S+ RAPM F+ + P GRV++R S D+  +D +V   +   +       S   ++  V+   L+  +P++ L      YY +T++E+ RL+  T+S +     E++ G  +I A++  D
Sbjct:  921 YLATEVLRVSSSTWLSIWTDQSTSKNYSPGFYIVVYALLGFGQVAVTFTNSFWLITSSLHAARRLHDAMLSSILRAPMLFFHTNPTGRVINRFSKDIGDIDRNVANLMNMFMNQLWQLLSTFALIGTVSTISLWAIMPLLILFYAAYLYYQSTSREVRRLDSVTRSPIYAQFGEALNGLSSIRAYKAYD 1109          
BLAST of EY665055 vs. ExPASy Swiss-Prot
Match: MRP6_RAT (Multidrug resistance-associated protein 6 OS=Rattus norvegicus GN=Abcc6 PE=2 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 1.118e-14
Identity = 52/197 (26.40%), Postives = 96/197 (48.73%), Query Frame = 2
Query:   29 IGQILQNSWLAANVENPNVSTLRLIV-----VYLLIGFVSTLFLMSRSLSSVVLGIRSSKSLFSQLLNSLFRAPMSFYDSTPLGRVLSRVSSDLSIVDLDVPFSL---------IFAVGATTNAYSNLGVLAVVTWQVLFVSIPVIFLAIRLQRYYFATAKELMRLNGTTKSLVANHLAESIAGAMTIXAFEXEDXF 577
            +    Q  WL+   ++P V   ++       ++ L+G +  + L +   +  + G R+S  LF  LL  + R+P+ F++ TP+G +L+R S +  IVD+D+P  +         +  VG   +  + L ++A+         +P++ L    Q  Y AT  +L RL   + S V +HLAE+  G+  + AF+ +  F
Sbjct:  958 VASFCQGYWLSLWADDPVVDGKQMHSALRGSIFGLLGCLQAIGLFASMAAVFLGGARASCLLFRSLLWDVARSPIGFFERTPVGNLLNRFSKETDIVDVDIPDKMRTLLTYAFGLLEVGLAVSMATPLAIVAI---------LPLMLLYAGFQSLYVATCCQLRRLESASYSSVCSHLAETFQGSQVVRAFQAQGPF 1145          
BLAST of EY665055 vs. ExPASy Swiss-Prot
Match: NFT1_YEAST (ABC transporter NFT1 OS=Saccharomyces cerevisiae GN=NFT1 PE=1 SV=2)

HSP 1 Score: 77.0258 bits (188), Expect = 1.346e-14
Identity = 48/178 (26.97%), Postives = 90/178 (50.56%), Query Frame = 2
Query:   44 QNSWLAANVENPNVSTLRLIVVYLLIGFVSTLFLMSRSLSSVVLGIRSSKSLFSQLLNSLFRAPMSFYDSTPLGRVLSRVSSDLSIVDLDVPFSLIFAVGATTNAYSNLGVLAVVTWQVLFVSIPVIFLAIRLQRYYFATAKELMRLNGTTKSLVANHLAESIAGAMTIXAFEXEDXF 577
            +++WL   VE    S +  ++ Y++IG VS+     +   +++ G   +K +F++LL+S+  A + F++ TP GR+++R S D+ I+D  +  +      +       + ++  VT Q L  +IP+  L   +   Y   ++EL R++    S +    AE+I G  TI A   E  F
Sbjct:  994 KSTWLYRIVEGH--SNIYFLLTYIIIGLVSSFLTSGKVWIAIISGTNVTKKIFAKLLSSILYAKLRFHNVTPTGRIMNRFSKDMDIIDQQLIPNFEGLSYSVVVCLWIILLIGYVTPQFLLFAIPLCALYYTVCTLYLRASRELKRIDNINISPIHQLFAEAIKGVTTIRALADERRF 1169          

HSP 2 Score: 23.8682 bits (50), Expect = 1.346e-14
Identity = 10/25 (40.00%), Postives = 14/25 (56.00%), Query Frame = 3
Query:  576 FFAKNLDLIDTNASPFFQTFAANEW 650
            F  ++L  ID + +PFF    A EW
Sbjct: 1169 FITQSLVAIDRSNAPFFYLNMATEW 1193          
The following BLAST results are available for this feature:
BLAST of EY665055 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 104
Match NameE-valueIdentityDescription
AB2C_ARATH7.741e-1628.21ABC transporter C family member 2 OS=Arabidopsis t... [more]
ABCC9_RAT1.276e-1528.73ATP-binding cassette transporter sub-family C memb... [more]
ABCC9_MOUSE1.659e-1528.73ATP-binding cassette transporter sub-family C memb... [more]
MRP7_HUMAN1.724e-1532.69Multidrug resistance-associated protein 7 OS=Homo ... [more]
MRP1_MOUSE2.941e-1526.84Multidrug resistance-associated protein 1 OS=Mus m... [more]
CFTR_LOXAF3.842e-1528.31Cystic fibrosis transmembrane conductance regulato... [more]
MRP1_RAT6.553e-1528.03Multidrug resistance-associated protein 1 OS=Rattu... [more]
AB12C_ARATH6.553e-1525.40ABC transporter C family member 12 OS=Arabidopsis ... [more]
MRP6_RAT1.118e-1426.40Multidrug resistance-associated protein 6 OS=Rattu... [more]
NFT1_YEAST1.346e-1426.97ABC transporter NFT1 OS=Saccharomyces cerevisiae G... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-073-E05-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY665055 ID=EY665055; Name=EY665055; organism=Citrus sinensis; type=EST; length=903bp
AGCCAGCCTCTCTCACCTTACATTTGTGATTGGTCAGATATTGCAGAACT
CTTGGCTGGCTGCCAATGTAGAAAATCCTAATGTCAGCACATTACGGCTG
ATAGTGGTTTACTTGTTGATTGGATTTGTCTCAACACTATTCCTGATGTC
TAGATCTCTCTCTAGTGTTGTTTTAGGTATTAGATCATCAAAATCTTTGT
TCTCACAGCTTTTAAATTCCCTTTTCCGTGCACCTATGTCTTTTTACGAC
TCCACACCTCTTGGAAGGGTACTTAGTCGGGTTTCTTCTGATCTGAGTAT
TGTCGACCTAGATGTTCCATTCAGTTTAATCTTTGCTGTCGGGGCTACCA
CAAATGCTTATAGTAATCTAGGAGTACTTGCTGTTGTCACATGGCAAGTC
CTATTCGTTTCCATACCAGTGATTTTCTTGGCAATTCGCTTGCAGAGATA
CTATTTTGCTACTGCAAAAGAATTGATGCGGCTTAACGGCACAACCAAGT
CCTTGGTAGCAAATCATCTAGCTGAGTCTATAGCAGGAGCCATGACAATT
ANGGCTTTTGAGGANGAAGATCNGTTTTTTTGCAAAGAACCTTGACCTCA
TTGATACCAATGCCAGTCCTTTCTTCCAAACTTTTGCAGCAAATGAGTGG
GNTGATCCAACGCCCTAGAACACTCAGTGCAACNNTGTATATCCTCGCAG
CATTCTGTATGGTTTTGCTTNCTNCTGNAACTTTTACCCCTGNATTNATT
NGAATGGCCCTTTCTTATGGTCTTCGTTAAACAGTCCCTAGTATGTCAAT
CCAAAACAGTGTACTCTANCAATTATATCATTCTGTAAAAGACTTTACCA
TACTGCATGTACCAGTGAAGCCCTGAGTAGTAGAAACAACCGCCCCACCA
CTG
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