EY665055

Overview
NameEY665055
Unique NameEY665055
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length903
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY665055 vs. ExPASy Swiss-Prot
Match: CFTR_PONAB (Cystic fibrosis transmembrane conductance regulator OS=Pongo abelii GN=CFTR PE=3 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.460e-14
Identity = 50/166 (30.12%), Postives = 86/166 (51.81%), Query Frame = 2
Query:   86 STLRLIVVYLLIGFVSTLFLMS--RSLSSVVLGIRSSKSLFSQLLNSLFRAPMSFYDSTPLGRVLSRVSSDLSIVDLDVPFSLIFAVGATTNAYSNLGVLAVVTWQVLFVSIPVIFLAIRLQRYYFATAKELMRLNGTTKSLVANHLAESIAGAMTIXAFEXEDXF 577
            ST    V Y+ +G   TL  M   R L  V   I  SK L +++L+S+ +APMS  ++   G +L+R S D++I+D  +P ++   +         + V+AV+   +   ++PVI   I L+ Y+  T+++L +L    +S +  HL  S+ G  T+ AF  +  F
Sbjct:  909 STSSYYVFYIYVGVADTLLAMGFFRGLPLVHTLITVSKILHNKMLHSVLQAPMSTLNTLKAGGILNRFSKDIAILDDLLPLTIFDFIQLLLIVIGAIAVVAVLQPYIFVATVPVIVAFIMLRAYFLQTSQQLKQLESEGRSPIFTHLVTSLKGLWTLRAFGRQPYF 1074          
BLAST of EY665055 vs. ExPASy Swiss-Prot
Match: MRP6_HUMAN (Multidrug resistance-associated protein 6 OS=Homo sapiens GN=ABCC6 PE=1 SV=2)

HSP 1 Score: 79.7221 bits (195), Expect = 2.490e-14
Identity = 49/188 (26.06%), Postives = 92/188 (48.94%), Query Frame = 2
Query:   29 IGQILQNSWLAANVENPNVSTLRLIV-----VYLLIGFVSTLFLMSRSLSSVVLGIRSSKSLFSQLLNSLFRAPMSFYDSTPLGRVLSRVSSDLSIVDLDVPFSLIFAVGATTNAYSNLGVLAVVTWQVLFVSIPVIFLAIRLQRYYFATAKELMRLNGTTKSLVANHLAESIAGAMTIXAFEXEDXF 577
            +    +  WL+   ++P V   +        ++ L+G +  + L +   + ++ G R+S+ LF +LL  + R+P+SF++ TP+G +L+R S +   VD+D+P  L   +           V+AV T       +P+  L    Q  Y  ++ +L RL   + S V +H+AE+  G+  + AF  +  F
Sbjct:  959 VASFCRGYWLSLWADDPAVGGQQTQAALRGGIFGLLGCLQAIGLFASMAAVLLGGARASRLLFQRLLWDVVRSPISFFERTPIGHLLNRFSKETDTVDVDIPDKLRSLLMYAFGLLEVSLVVAVATPLATVAILPLFLLYAGFQSLYVVSSCQLRRLESASYSSVCSHMAETFQGSTVVRAFRTQAPF 1146          
BLAST of EY665055 vs. ExPASy Swiss-Prot
Match: CFTR_PANTR (Cystic fibrosis transmembrane conductance regulator OS=Pan troglodytes GN=CFTR PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 2.490e-14
Identity = 50/166 (30.12%), Postives = 85/166 (51.20%), Query Frame = 2
Query:   86 STLRLIVVYLLIGFVSTLFLMS--RSLSSVVLGIRSSKSLFSQLLNSLFRAPMSFYDSTPLGRVLSRVSSDLSIVDLDVPFSLIFAVGATTNAYSNLGVLAVVTWQVLFVSIPVIFLAIRLQRYYFATAKELMRLNGTTKSLVANHLAESIAGAMTIXAFEXEDXF 577
            ST    V Y+ +G   TL  M   R L  V   I  SK L  ++L+S+ +APMS  ++   G +L+R S D++I+D  +P ++   +         + V+AV+   +   ++PVI   I L+ Y+  T+++L +L    +S +  HL  S+ G  T+ AF  +  F
Sbjct:  909 STSSYYVFYIYVGVADTLLAMGFFRGLPLVHTLITVSKILHHKMLHSVLQAPMSTLNTLKAGGILNRFSKDIAILDDLLPLTIFDFIQLLLIVIGAIAVVAVLQPYIFVATVPVIVAFIMLRAYFLQTSQQLKQLESEGRSPIFTHLVTSLKGLWTLRAFGRQPYF 1074          
BLAST of EY665055 vs. ExPASy Swiss-Prot
Match: CFTR_HYLLE (Cystic fibrosis transmembrane conductance regulator OS=Hylobates leucogenys GN=CFTR PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 2.490e-14
Identity = 50/166 (30.12%), Postives = 85/166 (51.20%), Query Frame = 2
Query:   86 STLRLIVVYLLIGFVSTLFLMS--RSLSSVVLGIRSSKSLFSQLLNSLFRAPMSFYDSTPLGRVLSRVSSDLSIVDLDVPFSLIFAVGATTNAYSNLGVLAVVTWQVLFVSIPVIFLAIRLQRYYFATAKELMRLNGTTKSLVANHLAESIAGAMTIXAFEXEDXF 577
            ST    V Y+ +G   TL  M   R L  V   I  SK L  ++L+S+ +APMS  ++   G +L+R S D++I+D  +P ++   +         + V+AV+   +   ++PVI   I L+ Y+  T+++L +L    +S +  HL  S+ G  T+ AF  +  F
Sbjct:  909 STSSYYVFYIYVGVADTLLAMGFFRGLPLVHTLITVSKILHHKMLHSVLQAPMSTLNTLKAGGILNRFSKDIAILDDLLPLTIFDFIQLLLIVIGAIAVVAVLQPYIFVATVPVIVAFIMLRAYFLQTSQQLKQLESEGRSPIFTHLVTSLKGLWTLRAFGRQPYF 1074          
BLAST of EY665055 vs. ExPASy Swiss-Prot
Match: CFTR_HUMAN (Cystic fibrosis transmembrane conductance regulator OS=Homo sapiens GN=CFTR PE=1 SV=3)

HSP 1 Score: 79.7221 bits (195), Expect = 2.490e-14
Identity = 50/166 (30.12%), Postives = 85/166 (51.20%), Query Frame = 2
Query:   86 STLRLIVVYLLIGFVSTLFLMS--RSLSSVVLGIRSSKSLFSQLLNSLFRAPMSFYDSTPLGRVLSRVSSDLSIVDLDVPFSLIFAVGATTNAYSNLGVLAVVTWQVLFVSIPVIFLAIRLQRYYFATAKELMRLNGTTKSLVANHLAESIAGAMTIXAFEXEDXF 577
            ST    V Y+ +G   TL  M   R L  V   I  SK L  ++L+S+ +APMS  ++   G +L+R S D++I+D  +P ++   +         + V+AV+   +   ++PVI   I L+ Y+  T+++L +L    +S +  HL  S+ G  T+ AF  +  F
Sbjct:  909 STSSYYVFYIYVGVADTLLAMGFFRGLPLVHTLITVSKILHHKMLHSVLQAPMSTLNTLKAGGILNRFSKDIAILDDLLPLTIFDFIQLLLIVIGAIAVVAVLQPYIFVATVPVIVAFIMLRAYFLQTSQQLKQLESEGRSPIFTHLVTSLKGLWTLRAFGRQPYF 1074          
BLAST of EY665055 vs. ExPASy Swiss-Prot
Match: CFTR_GORGO (Cystic fibrosis transmembrane conductance regulator OS=Gorilla gorilla gorilla GN=CFTR PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 2.490e-14
Identity = 50/166 (30.12%), Postives = 85/166 (51.20%), Query Frame = 2
Query:   86 STLRLIVVYLLIGFVSTLFLMS--RSLSSVVLGIRSSKSLFSQLLNSLFRAPMSFYDSTPLGRVLSRVSSDLSIVDLDVPFSLIFAVGATTNAYSNLGVLAVVTWQVLFVSIPVIFLAIRLQRYYFATAKELMRLNGTTKSLVANHLAESIAGAMTIXAFEXEDXF 577
            ST    V Y+ +G   TL  M   R L  V   I  SK L  ++L+S+ +APMS  ++   G +L+R S D++I+D  +P ++   +         + V+AV+   +   ++PVI   I L+ Y+  T+++L +L    +S +  HL  S+ G  T+ AF  +  F
Sbjct:  909 STSSYYVFYIYVGVADTLLAMGFFRGLPLVHTLITVSKILHHKMLHSVLQAPMSTLNTLKAGGILNRFSKDIAILDDLLPLTIFDFIQLLLIVIGAIAVVAVLQPYIFVATVPVIVAFIMLRAYFLQTSQQLKQLESEGRSPIFTHLVTSLKGLWTLRAFGRQPYF 1074          
BLAST of EY665055 vs. ExPASy Swiss-Prot
Match: AB1C_ARATH (ABC transporter C family member 1 OS=Arabidopsis thaliana GN=ABCC1 PE=1 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 3.252e-14
Identity = 46/191 (24.08%), Postives = 99/191 (51.83%), Query Frame = 2
Query:   17 LTFVIGQILQ---NSWLAANVENPNVST---LRLIVVYLLIGFVSTLFLMSRSLSSVVLGIRSSKSLFSQLLNSLFRAPMSFYDSTPLGRVLSRVSSDLSIVDLDVPFSLIFAVGATTNAYSNLGVLAVVTWQVLFVSIPVIFLAIRLQRYYFATAKELMRLNGTTKSLVANHLAESIAGAMTIXAFEXED 571
            + +V+ Q+ +   ++WL+   ++    T   L   +VY L+ F      +  S   ++  + ++K +   +L S+ RAPM F+ + PLGR+++R + D+  +D  V   +   +G+     S + ++ +V+   L+  +P++ +      YY  T++E+ R++ TT+S V     E++ G  +I A++  D
Sbjct:  921 ICYVLTQVFRVSSSTWLSEWTDSGTPKTHGPLFYNIVYALLSFGQVSVTLINSYWLIMSSLYAAKKMHDAMLGSILRAPMVFFQTNPLGRIINRFAKDMGDIDRTVAVFVNMFMGSIAQLLSTVILIGIVSTLSLWAIMPLLVVFYGAYLYYQNTSREIKRMDSTTRSPVYAQFGEALNGLSSIRAYKAYD 1111          
BLAST of EY665055 vs. ExPASy Swiss-Prot
Match: MRP6_MOUSE (Multidrug resistance-associated protein 6 OS=Mus musculus GN=Abcc6 PE=1 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 5.547e-14
Identity = 54/191 (28.27%), Postives = 93/191 (48.69%), Query Frame = 2
Query:   29 IGQILQNSWLAANVENPNVSTLRLIV-----VYLLIGFVSTLFLMSRSLSSVVLGIRSSKSLFSQLLNSLFRAPMSFYDSTPLGRVLSRVSSDLSIVDLDVPFSLIFAVGATTNAYSNLGVLAVVTWQ---VLFVSIPVIFLAIRLQRYYFATAKELMRLNGTTKSLVANHLAESIAGAMTIXAFEXEDXF 577
            +    Q  WL+   ++P V   ++       V+ L+G +  + L +   +  + G R+S  LF  LL  + R+P+ F++ TP+G +L+R S +   VD+D+P  L       T A+  L V   VT      +   +P++ L    Q  Y AT+ +L RL     S V +H+AE+  G++ + AF  +  F
Sbjct:  954 VASFSQGYWLSLWADDPVVDGRQMHAALRGWVFGLLGCLQAIGLFASMAAVFLGGARASGLLFRSLLWDVARSPIGFFERTPVGNLLNRFSKETDTVDVDIPDKL---RSLLTYAFGLLEVGLAVTMATPLAIVAILPLMVLYAGFQSLYVATSCQLRRLESARYSSVCSHMAETFQGSLVVRAFRAQASF 1141          
BLAST of EY665055 vs. ExPASy Swiss-Prot
Match: CFTR_ATEGE (Cystic fibrosis transmembrane conductance regulator OS=Ateles geoffroyi GN=CFTR PE=3 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 5.547e-14
Identity = 49/166 (29.52%), Postives = 86/166 (51.81%), Query Frame = 2
Query:   86 STLRLIVVYLLIGFVSTLFLMS--RSLSSVVLGIRSSKSLFSQLLNSLFRAPMSFYDSTPLGRVLSRVSSDLSIVDLDVPFSLIFAVGATTNAYSNLGVLAVVTWQVLFVSIPVIFLAIRLQRYYFATAKELMRLNGTTKSLVANHLAESIAGAMTIXAFEXEDXF 577
            +T    V Y+ +G   TL  +   R L  V   I  SK L  ++L+S+ +APMS  ++   G +L+R S D++I+D  +P ++   +         + V++V+   +L  ++PVI   I L+ Y+  T+++L +L    +S +  HL  S+ G  TI AF  +  F
Sbjct:  909 NTSSYYVFYIYVGVADTLLALGFFRGLPLVHTLITVSKILHHKMLHSVLQAPMSTLNTLKAGGILNRFSKDIAILDDLLPLTIFDFIQLLLIVIGAIAVVSVLQPYILLATVPVIAAFILLRAYFLQTSQQLKQLESAGRSPIFTHLVTSLKGLWTIRAFGRQPYF 1074          
BLAST of EY665055 vs. ExPASy Swiss-Prot
Match: CFTR_PAPAN (Cystic fibrosis transmembrane conductance regulator OS=Papio anubis GN=CFTR PE=3 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 7.245e-14
Identity = 48/160 (30.00%), Postives = 83/160 (51.88%), Query Frame = 2
Query:  104 VVYLLIGFVSTLFLMS--RSLSSVVLGIRSSKSLFSQLLNSLFRAPMSFYDSTPLGRVLSRVSSDLSIVDLDVPFSLIFAVGATTNAYSNLGVLAVVTWQVLFVSIPVIFLAIRLQRYYFATAKELMRLNGTTKSLVANHLAESIAGAMTIXAFEXEDXF 577
            V Y+ +G   TL  M   R L  V   I  SK L  ++L+S+ +APMS  ++   G +L+R S D++I+D  +P ++   +         + V+AV+   +   ++PVI   I L+ Y+  T+++L +L    +S +  HL  S+ G  T+ AF  +  F
Sbjct:  915 VFYIYVGVADTLLAMGFFRGLPLVHTLITVSKILHHKMLHSVLQAPMSTLNTLKAGGILNRFSKDIAILDDLLPLTIFDFIQLLLIVIGAIAVVAVLQPYIFVATVPVIVAFIMLRAYFLQTSQQLKQLESEGRSPIFTHLVTSLKGLWTLRAFGRQPYF 1074          
The following BLAST results are available for this feature:
BLAST of EY665055 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 104
Match NameE-valueIdentityDescription
CFTR_PONAB1.460e-1430.12Cystic fibrosis transmembrane conductance regulato... [more]
MRP6_HUMAN2.490e-1426.06Multidrug resistance-associated protein 6 OS=Homo ... [more]
CFTR_PANTR2.490e-1430.12Cystic fibrosis transmembrane conductance regulato... [more]
CFTR_HYLLE2.490e-1430.12Cystic fibrosis transmembrane conductance regulato... [more]
CFTR_HUMAN2.490e-1430.12Cystic fibrosis transmembrane conductance regulato... [more]
CFTR_GORGO2.490e-1430.12Cystic fibrosis transmembrane conductance regulato... [more]
AB1C_ARATH3.252e-1424.08ABC transporter C family member 1 OS=Arabidopsis t... [more]
MRP6_MOUSE5.547e-1428.27Multidrug resistance-associated protein 6 OS=Mus m... [more]
CFTR_ATEGE5.547e-1429.52Cystic fibrosis transmembrane conductance regulato... [more]
CFTR_PAPAN7.245e-1430.00Cystic fibrosis transmembrane conductance regulato... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-073-E05-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY665055 ID=EY665055; Name=EY665055; organism=Citrus sinensis; type=EST; length=903bp
AGCCAGCCTCTCTCACCTTACATTTGTGATTGGTCAGATATTGCAGAACT
CTTGGCTGGCTGCCAATGTAGAAAATCCTAATGTCAGCACATTACGGCTG
ATAGTGGTTTACTTGTTGATTGGATTTGTCTCAACACTATTCCTGATGTC
TAGATCTCTCTCTAGTGTTGTTTTAGGTATTAGATCATCAAAATCTTTGT
TCTCACAGCTTTTAAATTCCCTTTTCCGTGCACCTATGTCTTTTTACGAC
TCCACACCTCTTGGAAGGGTACTTAGTCGGGTTTCTTCTGATCTGAGTAT
TGTCGACCTAGATGTTCCATTCAGTTTAATCTTTGCTGTCGGGGCTACCA
CAAATGCTTATAGTAATCTAGGAGTACTTGCTGTTGTCACATGGCAAGTC
CTATTCGTTTCCATACCAGTGATTTTCTTGGCAATTCGCTTGCAGAGATA
CTATTTTGCTACTGCAAAAGAATTGATGCGGCTTAACGGCACAACCAAGT
CCTTGGTAGCAAATCATCTAGCTGAGTCTATAGCAGGAGCCATGACAATT
ANGGCTTTTGAGGANGAAGATCNGTTTTTTTGCAAAGAACCTTGACCTCA
TTGATACCAATGCCAGTCCTTTCTTCCAAACTTTTGCAGCAAATGAGTGG
GNTGATCCAACGCCCTAGAACACTCAGTGCAACNNTGTATATCCTCGCAG
CATTCTGTATGGTTTTGCTTNCTNCTGNAACTTTTACCCCTGNATTNATT
NGAATGGCCCTTTCTTATGGTCTTCGTTAAACAGTCCCTAGTATGTCAAT
CCAAAACAGTGTACTCTANCAATTATATCATTCTGTAAAAGACTTTACCA
TACTGCATGTACCAGTGAAGCCCTGAGTAGTAGAAACAACCGCCCCACCA
CTG
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