EY665055
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY665055 vs. ExPASy Swiss-Prot
Match: CFTR_PONAB (Cystic fibrosis transmembrane conductance regulator OS=Pongo abelii GN=CFTR PE=3 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 1.460e-14 Identity = 50/166 (30.12%), Postives = 86/166 (51.81%), Query Frame = 2 Query: 86 STLRLIVVYLLIGFVSTLFLMS--RSLSSVVLGIRSSKSLFSQLLNSLFRAPMSFYDSTPLGRVLSRVSSDLSIVDLDVPFSLIFAVGATTNAYSNLGVLAVVTWQVLFVSIPVIFLAIRLQRYYFATAKELMRLNGTTKSLVANHLAESIAGAMTIXAFEXEDXF 577 ST V Y+ +G TL M R L V I SK L +++L+S+ +APMS ++ G +L+R S D++I+D +P ++ + + V+AV+ + ++PVI I L+ Y+ T+++L +L +S + HL S+ G T+ AF + F Sbjct: 909 STSSYYVFYIYVGVADTLLAMGFFRGLPLVHTLITVSKILHNKMLHSVLQAPMSTLNTLKAGGILNRFSKDIAILDDLLPLTIFDFIQLLLIVIGAIAVVAVLQPYIFVATVPVIVAFIMLRAYFLQTSQQLKQLESEGRSPIFTHLVTSLKGLWTLRAFGRQPYF 1074
BLAST of EY665055 vs. ExPASy Swiss-Prot
Match: MRP6_HUMAN (Multidrug resistance-associated protein 6 OS=Homo sapiens GN=ABCC6 PE=1 SV=2) HSP 1 Score: 79.7221 bits (195), Expect = 2.490e-14 Identity = 49/188 (26.06%), Postives = 92/188 (48.94%), Query Frame = 2 Query: 29 IGQILQNSWLAANVENPNVSTLRLIV-----VYLLIGFVSTLFLMSRSLSSVVLGIRSSKSLFSQLLNSLFRAPMSFYDSTPLGRVLSRVSSDLSIVDLDVPFSLIFAVGATTNAYSNLGVLAVVTWQVLFVSIPVIFLAIRLQRYYFATAKELMRLNGTTKSLVANHLAESIAGAMTIXAFEXEDXF 577 + + WL+ ++P V + ++ L+G + + L + + ++ G R+S+ LF +LL + R+P+SF++ TP+G +L+R S + VD+D+P L + V+AV T +P+ L Q Y ++ +L RL + S V +H+AE+ G+ + AF + F Sbjct: 959 VASFCRGYWLSLWADDPAVGGQQTQAALRGGIFGLLGCLQAIGLFASMAAVLLGGARASRLLFQRLLWDVVRSPISFFERTPIGHLLNRFSKETDTVDVDIPDKLRSLLMYAFGLLEVSLVVAVATPLATVAILPLFLLYAGFQSLYVVSSCQLRRLESASYSSVCSHMAETFQGSTVVRAFRTQAPF 1146
BLAST of EY665055 vs. ExPASy Swiss-Prot
Match: CFTR_PANTR (Cystic fibrosis transmembrane conductance regulator OS=Pan troglodytes GN=CFTR PE=3 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 2.490e-14 Identity = 50/166 (30.12%), Postives = 85/166 (51.20%), Query Frame = 2 Query: 86 STLRLIVVYLLIGFVSTLFLMS--RSLSSVVLGIRSSKSLFSQLLNSLFRAPMSFYDSTPLGRVLSRVSSDLSIVDLDVPFSLIFAVGATTNAYSNLGVLAVVTWQVLFVSIPVIFLAIRLQRYYFATAKELMRLNGTTKSLVANHLAESIAGAMTIXAFEXEDXF 577 ST V Y+ +G TL M R L V I SK L ++L+S+ +APMS ++ G +L+R S D++I+D +P ++ + + V+AV+ + ++PVI I L+ Y+ T+++L +L +S + HL S+ G T+ AF + F Sbjct: 909 STSSYYVFYIYVGVADTLLAMGFFRGLPLVHTLITVSKILHHKMLHSVLQAPMSTLNTLKAGGILNRFSKDIAILDDLLPLTIFDFIQLLLIVIGAIAVVAVLQPYIFVATVPVIVAFIMLRAYFLQTSQQLKQLESEGRSPIFTHLVTSLKGLWTLRAFGRQPYF 1074
BLAST of EY665055 vs. ExPASy Swiss-Prot
Match: CFTR_HYLLE (Cystic fibrosis transmembrane conductance regulator OS=Hylobates leucogenys GN=CFTR PE=3 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 2.490e-14 Identity = 50/166 (30.12%), Postives = 85/166 (51.20%), Query Frame = 2 Query: 86 STLRLIVVYLLIGFVSTLFLMS--RSLSSVVLGIRSSKSLFSQLLNSLFRAPMSFYDSTPLGRVLSRVSSDLSIVDLDVPFSLIFAVGATTNAYSNLGVLAVVTWQVLFVSIPVIFLAIRLQRYYFATAKELMRLNGTTKSLVANHLAESIAGAMTIXAFEXEDXF 577 ST V Y+ +G TL M R L V I SK L ++L+S+ +APMS ++ G +L+R S D++I+D +P ++ + + V+AV+ + ++PVI I L+ Y+ T+++L +L +S + HL S+ G T+ AF + F Sbjct: 909 STSSYYVFYIYVGVADTLLAMGFFRGLPLVHTLITVSKILHHKMLHSVLQAPMSTLNTLKAGGILNRFSKDIAILDDLLPLTIFDFIQLLLIVIGAIAVVAVLQPYIFVATVPVIVAFIMLRAYFLQTSQQLKQLESEGRSPIFTHLVTSLKGLWTLRAFGRQPYF 1074
BLAST of EY665055 vs. ExPASy Swiss-Prot
Match: CFTR_HUMAN (Cystic fibrosis transmembrane conductance regulator OS=Homo sapiens GN=CFTR PE=1 SV=3) HSP 1 Score: 79.7221 bits (195), Expect = 2.490e-14 Identity = 50/166 (30.12%), Postives = 85/166 (51.20%), Query Frame = 2 Query: 86 STLRLIVVYLLIGFVSTLFLMS--RSLSSVVLGIRSSKSLFSQLLNSLFRAPMSFYDSTPLGRVLSRVSSDLSIVDLDVPFSLIFAVGATTNAYSNLGVLAVVTWQVLFVSIPVIFLAIRLQRYYFATAKELMRLNGTTKSLVANHLAESIAGAMTIXAFEXEDXF 577 ST V Y+ +G TL M R L V I SK L ++L+S+ +APMS ++ G +L+R S D++I+D +P ++ + + V+AV+ + ++PVI I L+ Y+ T+++L +L +S + HL S+ G T+ AF + F Sbjct: 909 STSSYYVFYIYVGVADTLLAMGFFRGLPLVHTLITVSKILHHKMLHSVLQAPMSTLNTLKAGGILNRFSKDIAILDDLLPLTIFDFIQLLLIVIGAIAVVAVLQPYIFVATVPVIVAFIMLRAYFLQTSQQLKQLESEGRSPIFTHLVTSLKGLWTLRAFGRQPYF 1074
BLAST of EY665055 vs. ExPASy Swiss-Prot
Match: CFTR_GORGO (Cystic fibrosis transmembrane conductance regulator OS=Gorilla gorilla gorilla GN=CFTR PE=3 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 2.490e-14 Identity = 50/166 (30.12%), Postives = 85/166 (51.20%), Query Frame = 2 Query: 86 STLRLIVVYLLIGFVSTLFLMS--RSLSSVVLGIRSSKSLFSQLLNSLFRAPMSFYDSTPLGRVLSRVSSDLSIVDLDVPFSLIFAVGATTNAYSNLGVLAVVTWQVLFVSIPVIFLAIRLQRYYFATAKELMRLNGTTKSLVANHLAESIAGAMTIXAFEXEDXF 577 ST V Y+ +G TL M R L V I SK L ++L+S+ +APMS ++ G +L+R S D++I+D +P ++ + + V+AV+ + ++PVI I L+ Y+ T+++L +L +S + HL S+ G T+ AF + F Sbjct: 909 STSSYYVFYIYVGVADTLLAMGFFRGLPLVHTLITVSKILHHKMLHSVLQAPMSTLNTLKAGGILNRFSKDIAILDDLLPLTIFDFIQLLLIVIGAIAVVAVLQPYIFVATVPVIVAFIMLRAYFLQTSQQLKQLESEGRSPIFTHLVTSLKGLWTLRAFGRQPYF 1074
BLAST of EY665055 vs. ExPASy Swiss-Prot
Match: AB1C_ARATH (ABC transporter C family member 1 OS=Arabidopsis thaliana GN=ABCC1 PE=1 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 3.252e-14 Identity = 46/191 (24.08%), Postives = 99/191 (51.83%), Query Frame = 2 Query: 17 LTFVIGQILQ---NSWLAANVENPNVST---LRLIVVYLLIGFVSTLFLMSRSLSSVVLGIRSSKSLFSQLLNSLFRAPMSFYDSTPLGRVLSRVSSDLSIVDLDVPFSLIFAVGATTNAYSNLGVLAVVTWQVLFVSIPVIFLAIRLQRYYFATAKELMRLNGTTKSLVANHLAESIAGAMTIXAFEXED 571 + +V+ Q+ + ++WL+ ++ T L +VY L+ F + S ++ + ++K + +L S+ RAPM F+ + PLGR+++R + D+ +D V + +G+ S + ++ +V+ L+ +P++ + YY T++E+ R++ TT+S V E++ G +I A++ D Sbjct: 921 ICYVLTQVFRVSSSTWLSEWTDSGTPKTHGPLFYNIVYALLSFGQVSVTLINSYWLIMSSLYAAKKMHDAMLGSILRAPMVFFQTNPLGRIINRFAKDMGDIDRTVAVFVNMFMGSIAQLLSTVILIGIVSTLSLWAIMPLLVVFYGAYLYYQNTSREIKRMDSTTRSPVYAQFGEALNGLSSIRAYKAYD 1111
BLAST of EY665055 vs. ExPASy Swiss-Prot
Match: MRP6_MOUSE (Multidrug resistance-associated protein 6 OS=Mus musculus GN=Abcc6 PE=1 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 5.547e-14 Identity = 54/191 (28.27%), Postives = 93/191 (48.69%), Query Frame = 2 Query: 29 IGQILQNSWLAANVENPNVSTLRLIV-----VYLLIGFVSTLFLMSRSLSSVVLGIRSSKSLFSQLLNSLFRAPMSFYDSTPLGRVLSRVSSDLSIVDLDVPFSLIFAVGATTNAYSNLGVLAVVTWQ---VLFVSIPVIFLAIRLQRYYFATAKELMRLNGTTKSLVANHLAESIAGAMTIXAFEXEDXF 577 + Q WL+ ++P V ++ V+ L+G + + L + + + G R+S LF LL + R+P+ F++ TP+G +L+R S + VD+D+P L T A+ L V VT + +P++ L Q Y AT+ +L RL S V +H+AE+ G++ + AF + F Sbjct: 954 VASFSQGYWLSLWADDPVVDGRQMHAALRGWVFGLLGCLQAIGLFASMAAVFLGGARASGLLFRSLLWDVARSPIGFFERTPVGNLLNRFSKETDTVDVDIPDKL---RSLLTYAFGLLEVGLAVTMATPLAIVAILPLMVLYAGFQSLYVATSCQLRRLESARYSSVCSHMAETFQGSLVVRAFRAQASF 1141
BLAST of EY665055 vs. ExPASy Swiss-Prot
Match: CFTR_ATEGE (Cystic fibrosis transmembrane conductance regulator OS=Ateles geoffroyi GN=CFTR PE=3 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 5.547e-14 Identity = 49/166 (29.52%), Postives = 86/166 (51.81%), Query Frame = 2 Query: 86 STLRLIVVYLLIGFVSTLFLMS--RSLSSVVLGIRSSKSLFSQLLNSLFRAPMSFYDSTPLGRVLSRVSSDLSIVDLDVPFSLIFAVGATTNAYSNLGVLAVVTWQVLFVSIPVIFLAIRLQRYYFATAKELMRLNGTTKSLVANHLAESIAGAMTIXAFEXEDXF 577 +T V Y+ +G TL + R L V I SK L ++L+S+ +APMS ++ G +L+R S D++I+D +P ++ + + V++V+ +L ++PVI I L+ Y+ T+++L +L +S + HL S+ G TI AF + F Sbjct: 909 NTSSYYVFYIYVGVADTLLALGFFRGLPLVHTLITVSKILHHKMLHSVLQAPMSTLNTLKAGGILNRFSKDIAILDDLLPLTIFDFIQLLLIVIGAIAVVSVLQPYILLATVPVIAAFILLRAYFLQTSQQLKQLESAGRSPIFTHLVTSLKGLWTIRAFGRQPYF 1074
BLAST of EY665055 vs. ExPASy Swiss-Prot
Match: CFTR_PAPAN (Cystic fibrosis transmembrane conductance regulator OS=Papio anubis GN=CFTR PE=3 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 7.245e-14 Identity = 48/160 (30.00%), Postives = 83/160 (51.88%), Query Frame = 2 Query: 104 VVYLLIGFVSTLFLMS--RSLSSVVLGIRSSKSLFSQLLNSLFRAPMSFYDSTPLGRVLSRVSSDLSIVDLDVPFSLIFAVGATTNAYSNLGVLAVVTWQVLFVSIPVIFLAIRLQRYYFATAKELMRLNGTTKSLVANHLAESIAGAMTIXAFEXEDXF 577 V Y+ +G TL M R L V I SK L ++L+S+ +APMS ++ G +L+R S D++I+D +P ++ + + V+AV+ + ++PVI I L+ Y+ T+++L +L +S + HL S+ G T+ AF + F Sbjct: 915 VFYIYVGVADTLLAMGFFRGLPLVHTLITVSKILHHKMLHSVLQAPMSTLNTLKAGGILNRFSKDIAILDDLLPLTIFDFIQLLLIVIGAIAVVAVLQPYIFVATVPVIVAFIMLRAYFLQTSQQLKQLESEGRSPIFTHLVTSLKGLWTLRAFGRQPYF 1074 The following BLAST results are available for this feature:
BLAST of EY665055 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 104
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Sequences
The
following sequences are available for this feature:
EST sequence >EY665055 ID=EY665055; Name=EY665055; organism=Citrus sinensis; type=EST; length=903bpback to top |