EY665055

Overview
NameEY665055
Unique NameEY665055
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length903
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY665055 vs. ExPASy Swiss-Prot
Match: CFTR_MACNE (Cystic fibrosis transmembrane conductance regulator OS=Macaca nemestrina GN=CFTR PE=3 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 7.245e-14
Identity = 48/160 (30.00%), Postives = 83/160 (51.88%), Query Frame = 2
Query:  104 VVYLLIGFVSTLFLMS--RSLSSVVLGIRSSKSLFSQLLNSLFRAPMSFYDSTPLGRVLSRVSSDLSIVDLDVPFSLIFAVGATTNAYSNLGVLAVVTWQVLFVSIPVIFLAIRLQRYYFATAKELMRLNGTTKSLVANHLAESIAGAMTIXAFEXEDXF 577
            V Y+ +G   TL  M   R L  V   I  SK L  ++L+S+ +APMS  ++   G +L+R S D++I+D  +P ++   +         + V+AV+   +   ++PVI   I L+ Y+  T+++L +L    +S +  HL  S+ G  T+ AF  +  F
Sbjct:  915 VFYIYVGVADTLLAMGFFRGLPLVHTLITVSKILHHKMLHSVLQAPMSTLNTLKAGGILNRFSKDIAILDDLLPLTIFDFIQLLLIVIGAIAVVAVLQPYIFVATVPVIVAFIMLRAYFLQTSQQLKQLESEGRSPIFTHLVTSLKGLWTLRAFGRQPYF 1074          
BLAST of EY665055 vs. ExPASy Swiss-Prot
Match: CFTR_MACMU (Cystic fibrosis transmembrane conductance regulator OS=Macaca mulatta GN=CFTR PE=2 SV=2)

HSP 1 Score: 78.1814 bits (191), Expect = 7.245e-14
Identity = 48/160 (30.00%), Postives = 83/160 (51.88%), Query Frame = 2
Query:  104 VVYLLIGFVSTLFLMS--RSLSSVVLGIRSSKSLFSQLLNSLFRAPMSFYDSTPLGRVLSRVSSDLSIVDLDVPFSLIFAVGATTNAYSNLGVLAVVTWQVLFVSIPVIFLAIRLQRYYFATAKELMRLNGTTKSLVANHLAESIAGAMTIXAFEXEDXF 577
            V Y+ +G   TL  M   R L  V   I  SK L  ++L+S+ +APMS  ++   G +L+R S D++I+D  +P ++   +         + V+AV+   +   ++PVI   I L+ Y+  T+++L +L    +S +  HL  S+ G  T+ AF  +  F
Sbjct:  915 VFYIYVGVADTLLAMGFFRGLPLVHTLITVSKILHHKMLHSVLQAPMSTLNTLKAGGILNRFSKDIAILDDLLPLTIFDFIQLLLIVIGAIAVVAVLQPYIFVATVPVIVAFIMLRAYFLQTSQQLKQLESEGRSPIFTHLVTSLKGLWTLRAFGRQPYF 1074          
BLAST of EY665055 vs. ExPASy Swiss-Prot
Match: CFTR_MACFU (Cystic fibrosis transmembrane conductance regulator OS=Macaca fuscata fuscata GN=CFTR PE=3 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 7.245e-14
Identity = 48/160 (30.00%), Postives = 83/160 (51.88%), Query Frame = 2
Query:  104 VVYLLIGFVSTLFLMS--RSLSSVVLGIRSSKSLFSQLLNSLFRAPMSFYDSTPLGRVLSRVSSDLSIVDLDVPFSLIFAVGATTNAYSNLGVLAVVTWQVLFVSIPVIFLAIRLQRYYFATAKELMRLNGTTKSLVANHLAESIAGAMTIXAFEXEDXF 577
            V Y+ +G   TL  M   R L  V   I  SK L  ++L+S+ +APMS  ++   G +L+R S D++I+D  +P ++   +         + V+AV+   +   ++PVI   I L+ Y+  T+++L +L    +S +  HL  S+ G  T+ AF  +  F
Sbjct:  915 VFYIYVGVADTLLAMGFFRGLPLVHTLITVSKILHHKMLHSVLQAPMSTLNTLKAGGILNRFSKDIAILDDLLPLTIFDFIQLLLIVIGAIAVVAVLQPYIFVATVPVIVAFIMLRAYFLQTSQQLKQLESEGRSPIFTHLVTSLKGLWTLRAFGRQPYF 1074          
BLAST of EY665055 vs. ExPASy Swiss-Prot
Match: CFTR_MACFA (Cystic fibrosis transmembrane conductance regulator OS=Macaca fascicularis GN=CFTR PE=3 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 7.245e-14
Identity = 48/160 (30.00%), Postives = 83/160 (51.88%), Query Frame = 2
Query:  104 VVYLLIGFVSTLFLMS--RSLSSVVLGIRSSKSLFSQLLNSLFRAPMSFYDSTPLGRVLSRVSSDLSIVDLDVPFSLIFAVGATTNAYSNLGVLAVVTWQVLFVSIPVIFLAIRLQRYYFATAKELMRLNGTTKSLVANHLAESIAGAMTIXAFEXEDXF 577
            V Y+ +G   TL  M   R L  V   I  SK L  ++L+S+ +APMS  ++   G +L+R S D++I+D  +P ++   +         + V+AV+   +   ++PVI   I L+ Y+  T+++L +L    +S +  HL  S+ G  T+ AF  +  F
Sbjct:  915 VFYIYVGVADTLLAMGFFRGLPLVHTLITVSKILHHKMLHSVLQAPMSTLNTLKAGGILNRFSKDIAILDDLLPLTIFDFIQLLLIVIGAIAVVAVLQPYIFVATVPVIVAFIMLRAYFLQTSQQLKQLESEGRSPIFTHLVTSLKGLWTLRAFGRQPYF 1074          
BLAST of EY665055 vs. ExPASy Swiss-Prot
Match: CFTR_COLGU (Cystic fibrosis transmembrane conductance regulator OS=Colobus guereza GN=CFTR PE=3 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 7.245e-14
Identity = 48/160 (30.00%), Postives = 83/160 (51.88%), Query Frame = 2
Query:  104 VVYLLIGFVSTLFLMS--RSLSSVVLGIRSSKSLFSQLLNSLFRAPMSFYDSTPLGRVLSRVSSDLSIVDLDVPFSLIFAVGATTNAYSNLGVLAVVTWQVLFVSIPVIFLAIRLQRYYFATAKELMRLNGTTKSLVANHLAESIAGAMTIXAFEXEDXF 577
            V Y+ +G   TL  M   R L  V   I  SK L  ++L+S+ +APMS  ++   G +L+R S D++I+D  +P ++   +         + V+AV+   +   ++PVI   I L+ Y+  T+++L +L    +S +  HL  S+ G  T+ AF  +  F
Sbjct:  915 VFYIYVGVADTLLAMGFFRGLPLVHTLITVSKILHHKMLHSVLQAPMSTLNTLKAGGILNRFSKDIAILDDLLPLTIFDFIQLLLIVIGAIAVVAVLQPYIFVATVPVIVAFIMLRAYFLQTSQQLKQLESEGRSPIFTHLVTSLKGLWTLRAFGRQPYF 1074          
BLAST of EY665055 vs. ExPASy Swiss-Prot
Match: CFTR_CERAE (Cystic fibrosis transmembrane conductance regulator OS=Cercopithecus aethiops GN=CFTR PE=3 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 7.245e-14
Identity = 48/160 (30.00%), Postives = 83/160 (51.88%), Query Frame = 2
Query:  104 VVYLLIGFVSTLFLMS--RSLSSVVLGIRSSKSLFSQLLNSLFRAPMSFYDSTPLGRVLSRVSSDLSIVDLDVPFSLIFAVGATTNAYSNLGVLAVVTWQVLFVSIPVIFLAIRLQRYYFATAKELMRLNGTTKSLVANHLAESIAGAMTIXAFEXEDXF 577
            V Y+ +G   TL  M   R L  V   I  SK L  ++L+S+ +APMS  ++   G +L+R S D++I+D  +P ++   +         + V+AV+   +   ++PVI   I L+ Y+  T+++L +L    +S +  HL  S+ G  T+ AF  +  F
Sbjct:  915 VFYIYVGVADTLLAMGFFRGLPLVHTLITVSKILHHKMLHSVLQAPMSTLNTLKAGGILNRFSKDIAILDDLLPLTIFDFIQLLLIVIGAIAVVAVLQPYIFVATVPVIVAFIMLRAYFLQTSQQLKQLESEGRSPIFTHLVTSLKGLWTLRAFGRQPYF 1074          
BLAST of EY665055 vs. ExPASy Swiss-Prot
Match: BPT1_YEAST (Bile pigment transporter 1 OS=Saccharomyces cerevisiae GN=BPT1 PE=1 SV=2)

HSP 1 Score: 77.7962 bits (190), Expect = 9.462e-14
Identity = 52/178 (29.21%), Postives = 97/178 (54.49%), Query Frame = 2
Query:   53 WLAANVENPNVSTLRLIV-VYLLIGFVSTLFLMSRSLSSVVL-GIRSSKSLFSQLLNSLFRAPMSFYDSTPLGRVLSRVSSDLSIVDLDVPFSL-IFAVGATTNAYSNLGVLAVVTWQVLFVSIPVIFLAIRLQRYYFATAKELMRLNGTTKSLVANHLAESIAGAMTIXAFEXEDXF 577
            W  +N +N +   + + V VY LIG  S  F   RS+  ++   IR SK L   +  S+ R+PM+F+++TP+GR+++R SSD+  VD ++ +    F     T   + + V   + W ++F ++ ++ + I  Q +Y   ++EL RL   + S + + ++ES+ G   I A++  + F
Sbjct: 1004 WSESNEKNGSNERVWMFVGVYSLIGVASAAFNNLRSIMMLLYCSIRGSKKLHESMAKSVIRSPMTFFETTPVGRIINRFSSDMDAVDSNLQYIFSFFFKSILTYLVTVILVGYNMPWFLVF-NMFLVVIYIYYQTFYIVLSRELKRLISISYSPIMSLMSESLNGYSIIDAYDHFERF 1180          
BLAST of EY665055 vs. ExPASy Swiss-Prot
Match: CFTR_ORNAN (Cystic fibrosis transmembrane conductance regulator OS=Ornithorhynchus anatinus GN=CFTR PE=3 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 1.236e-13
Identity = 48/177 (27.12%), Postives = 88/177 (49.72%), Query Frame = 2
Query:   53 WLAANVENPNVSTLRLIVVYLLIGFVSTLFLMS--RSLSSVVLGIRSSKSLFSQLLNSLFRAPMSFYDSTPLGRVLSRVSSDLSIVDLDVPFSLIFAVGATTNAYSNLGVLAVVTWQVLFVSIPVIFLAIRLQRYYFATAKELMRLNGTTKSLVANHLAESIAGAMTIXAFEXEDXF 577
            W A  V N    T    + Y+ +G   TL  +   R L  V   I  SK L  ++L+S+ +APMS +++   G +L+R S D++I+D  +P ++   +         + V++ +   +   S+PV+   + L+ Y+  T+++L +L    +S +  HL  S+ G  T+ AF  +  F
Sbjct:  906 WFAVIVTN----TSTYYMFYIYVGVADTLLALGFLRGLPLVHSLISVSKILHQKMLHSVLQAPMSTFNTLKTGSILNRFSKDMAILDDLLPLTIFDFIQLLLIVIGAVTVVSALQPYIFLASVPVVIAFVLLRAYFLRTSQQLKQLESEARSPIFTHLITSLKGLWTLRAFGRQTYF 1078          
BLAST of EY665055 vs. ExPASy Swiss-Prot
Match: CFTR_MICMU (Cystic fibrosis transmembrane conductance regulator OS=Microcebus murinus GN=CFTR PE=3 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 1.236e-13
Identity = 52/181 (28.73%), Postives = 92/181 (50.83%), Query Frame = 2
Query:   47 NSWLAANVENPNV--STLRLIVVYLLIGFVSTLFLMS--RSLSSVVLGIRSSKSLFSQLLNSLFRAPMSFYDSTPLGRVLSRVSSDLSIVDLDVPFSLIFAVGATTNAYSNLGVLAVVTWQVLFVSIPVIFLAIRLQRYYFATAKELMRLNGTTKSLVANHLAESIAGAMTIXAFEXEDXF 577
            NS ++AN     +  ST    V Y+ +G   TL  +   R L  V   I  SK L  ++L+S+ +APMS  ++   G +L+R S D++I+D  +P ++   +         + V++V+   +   ++PVI   I L+ Y+  T+++L +L    +S +  HL  S+ G  T+ AF  +  F
Sbjct:  894 NSTISANSSYAVIITSTSAYYVFYIYVGVADTLLALGFFRGLPLVHTLITVSKILHHKMLHSVLQAPMSTLNALKAGGILNRFSKDIAILDDLLPLTIFDFIQLLLIVIGAVAVVSVLQPYIFLATVPVIVTFIILRAYFLHTSQQLKQLESEGRSPIFTHLVTSLKGLWTLRAFGRQPYF 1074          
BLAST of EY665055 vs. ExPASy Swiss-Prot
Match: CFTR_TRIVU (Cystic fibrosis transmembrane conductance regulator OS=Trichosurus vulpecula GN=CFTR PE=2 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.614e-13
Identity = 47/166 (28.31%), Postives = 85/166 (51.20%), Query Frame = 2
Query:   86 STLRLIVVYLLIGFVSTLFLMS--RSLSSVVLGIRSSKSLFSQLLNSLFRAPMSFYDSTPLGRVLSRVSSDLSIVDLDVPFSLIFAVGATTNAYSNLGVLAVVTWQVLFVSIPVIFLAIRLQRYYFATAKELMRLNGTTKSLVANHLAESIAGAMTIXAFEXEDXF 577
            +T +  + Y+ +G   T F +   R L  V   I  SK L  ++L S+ +APMS + +   G +L+R S D++I+D  +P ++   V         L V++V+   +   ++PVI   I L+ Y+  T+++L +L    ++ +  HL  S+ G  T+ AF  +  F
Sbjct:  908 NTSKYYLFYIYVGVADTFFALGLLRGLPLVHTLISVSKILHHKMLCSVLKAPMSTFSTLKAGGILNRFSKDIAILDDLLPLTIFDFVQLILIVVGALIVVSVLQPYIFLATVPVIIAFIMLRAYFLQTSQQLKQLESEARTPIFTHLVTSLKGLWTLRAFGRQPYF 1073          
The following BLAST results are available for this feature:
BLAST of EY665055 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 104
Match NameE-valueIdentityDescription
CFTR_MACNE7.245e-1430.00Cystic fibrosis transmembrane conductance regulato... [more]
CFTR_MACMU7.245e-1430.00Cystic fibrosis transmembrane conductance regulato... [more]
CFTR_MACFU7.245e-1430.00Cystic fibrosis transmembrane conductance regulato... [more]
CFTR_MACFA7.245e-1430.00Cystic fibrosis transmembrane conductance regulato... [more]
CFTR_COLGU7.245e-1430.00Cystic fibrosis transmembrane conductance regulato... [more]
CFTR_CERAE7.245e-1430.00Cystic fibrosis transmembrane conductance regulato... [more]
BPT1_YEAST9.462e-1429.21Bile pigment transporter 1 OS=Saccharomyces cerevi... [more]
CFTR_ORNAN1.236e-1327.12Cystic fibrosis transmembrane conductance regulato... [more]
CFTR_MICMU1.236e-1328.73Cystic fibrosis transmembrane conductance regulato... [more]
CFTR_TRIVU1.614e-1328.31Cystic fibrosis transmembrane conductance regulato... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-073-E05-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY665055 ID=EY665055; Name=EY665055; organism=Citrus sinensis; type=EST; length=903bp
AGCCAGCCTCTCTCACCTTACATTTGTGATTGGTCAGATATTGCAGAACT
CTTGGCTGGCTGCCAATGTAGAAAATCCTAATGTCAGCACATTACGGCTG
ATAGTGGTTTACTTGTTGATTGGATTTGTCTCAACACTATTCCTGATGTC
TAGATCTCTCTCTAGTGTTGTTTTAGGTATTAGATCATCAAAATCTTTGT
TCTCACAGCTTTTAAATTCCCTTTTCCGTGCACCTATGTCTTTTTACGAC
TCCACACCTCTTGGAAGGGTACTTAGTCGGGTTTCTTCTGATCTGAGTAT
TGTCGACCTAGATGTTCCATTCAGTTTAATCTTTGCTGTCGGGGCTACCA
CAAATGCTTATAGTAATCTAGGAGTACTTGCTGTTGTCACATGGCAAGTC
CTATTCGTTTCCATACCAGTGATTTTCTTGGCAATTCGCTTGCAGAGATA
CTATTTTGCTACTGCAAAAGAATTGATGCGGCTTAACGGCACAACCAAGT
CCTTGGTAGCAAATCATCTAGCTGAGTCTATAGCAGGAGCCATGACAATT
ANGGCTTTTGAGGANGAAGATCNGTTTTTTTGCAAAGAACCTTGACCTCA
TTGATACCAATGCCAGTCCTTTCTTCCAAACTTTTGCAGCAAATGAGTGG
GNTGATCCAACGCCCTAGAACACTCAGTGCAACNNTGTATATCCTCGCAG
CATTCTGTATGGTTTTGCTTNCTNCTGNAACTTTTACCCCTGNATTNATT
NGAATGGCCCTTTCTTATGGTCTTCGTTAAACAGTCCCTAGTATGTCAAT
CCAAAACAGTGTACTCTANCAATTATATCATTCTGTAAAAGACTTTACCA
TACTGCATGTACCAGTGAAGCCCTGAGTAGTAGAAACAACCGCCCCACCA
CTG
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