EY665055

Overview
NameEY665055
Unique NameEY665055
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length903
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY665055 vs. ExPASy Swiss-Prot
Match: MRP5_MOUSE (Multidrug resistance-associated protein 5 OS=Mus musculus GN=Abcc5 PE=1 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 1.844e-13
Identity = 48/158 (30.38%), Postives = 78/158 (49.37%), Query Frame = 2
Query:  107 VYLLIGFVSTLFLMSRSLSSVVLGIRSSKSLFSQLLNSLFRAPMSFYDSTPLGRVLSRVSSDLSIVDLDVPFSLIFAVGATTNAYSNLGVLA-VVTWQVLFVSIPVIFLAIRLQRYYFATAKELMRLNGTTKSLVANHLAESIAGAMTIXAFEXEDXF 577
            +Y L   V  +    R +  V   +R+S  L  +L   + R+PM F+D+TP GR+L+R S D+  VD+ +PF     +      +  +G++A V  W ++ V  P++ L   L        +EL RL+  T+S   +H+  SI G  TI A+     F
Sbjct:  916 IYALSMAVMLILKAIRGVVFVKGTLRASSRLHDELFRRILRSPMKFFDTTPTGRILNRFSKDMDEVDVRLPFQAEMFIQNVILVFFCVGMIAGVFPWFLVAVG-PLLILFSLLHIVSRVLIRELKRLDNITQSPFLSHITSSIQGLATIHAYNKRQEF 1072          

HSP 2 Score: 22.7126 bits (47), Expect = 1.844e-13
Identity = 9/25 (36.00%), Postives = 13/25 (52.00%), Query Frame = 3
Query:  576 FFAKNLDLIDTNASPFFQTFAANEW 650
            F  +  +L+D N +PFF    A  W
Sbjct: 1072 FLHRYQELLDDNQAPFFLFTCAMRW 1096          
BLAST of EY665055 vs. ExPASy Swiss-Prot
Match: CFTR_ATEAB (Cystic fibrosis transmembrane conductance regulator OS=Atelerix albiventris GN=CFTR PE=3 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 2.108e-13
Identity = 45/166 (27.11%), Postives = 87/166 (52.41%), Query Frame = 2
Query:   86 STLRLIVVYLLIGFVSTLFLMS--RSLSSVVLGIRSSKSLFSQLLNSLFRAPMSFYDSTPLGRVLSRVSSDLSIVDLDVPFSLIFAVGATTNAYSNLGVLAVVTWQVLFVSIPVIFLAIRLQRYYFATAKELMRLNGTTKSLVANHLAESIAGAMTIXAFEXEDXF 577
            +T    ++Y+ +G   TL  +   R L  V   I +SK L  ++L+S+ +APMS  ++   G +L+R S D++I+D  +P ++   +         + V++V+   +   ++PVI   + L+ Y+  T+++L +L    +S +  HL  S+ G  T+ AF  +  F
Sbjct:  911 NTSSYYIIYIYVGVADTLLALGLLRGLPLVHTLITASKILHHKMLHSVLQAPMSTLNTLKAGGILNRFSKDIAILDDLLPLTIFDFIQLILIVIGAVIVVSVLEPYIFLATVPVIIAFVMLRAYFLHTSQQLKQLESEGRSPIFTHLVTSLKGLWTLRAFGRQPYF 1076          
BLAST of EY665055 vs. ExPASy Swiss-Prot
Match: CFTR_AOTNA (Cystic fibrosis transmembrane conductance regulator OS=Aotus nancymaae GN=CFTR PE=3 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 2.108e-13
Identity = 47/166 (28.31%), Postives = 85/166 (51.20%), Query Frame = 2
Query:   86 STLRLIVVYLLIGFVSTLFLMS--RSLSSVVLGIRSSKSLFSQLLNSLFRAPMSFYDSTPLGRVLSRVSSDLSIVDLDVPFSLIFAVGATTNAYSNLGVLAVVTWQVLFVSIPVIFLAIRLQRYYFATAKELMRLNGTTKSLVANHLAESIAGAMTIXAFEXEDXF 577
            +T    V Y+ +G   TL  +   R L  V   I  SK L  ++L+S+ +APMS  ++   G +L+R S D++I+D  +P ++   +         + V++V+   +   ++PVI   I L+ Y+  T+++L +L    +S +  HL  S+ G  T+ AF  +  F
Sbjct:  909 NTSSYYVFYIYVGVADTLLALGFFRGLPLVHTLITVSKMLHHKMLHSVLQAPMSTLNTLKAGGILNRFSKDIAILDDLLPLTIFDFIQLLLIVIGAIAVVSVLQPYIFLATVPVIAAFILLRAYFLQTSQQLKQLESAGRSPIFTHLVTSLKGLWTLRAFGRQPYF 1074          
BLAST of EY665055 vs. ExPASy Swiss-Prot
Match: ABCCF_DICDI (ABC transporter C family member 15 OS=Dictyostelium discoideum GN=abcC15 PE=3 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 2.108e-13
Identity = 60/201 (29.85%), Postives = 107/201 (53.23%), Query Frame = 2
Query:   14 HLTFVIGQILQNSWLAA-------NVENPNVSTLRLIVVYLLIGFVSTLFLMSRSLSSVVLGIRSSKSLFSQLLNSLFRAPMSFYDSTPLGRVLSRVSSDLSIVDLDV--PFSLIFAVGATTNAYSNLGVLAVVTWQVLFVSIP-VIFLAIR--LQRYYFATAKELMRLNGTTKSLVANHLAESIAGAMTIXAFEXEDXFF 580
            +LT  I  +L + WL +       NV  P      LI +  + GFV TL +    ++ +  G  S+++L   LL S+ RAP++F++  P+GR+L+R   D+S +D+ +   FS +   GA     +++G++  ++    +++IP VI +AI    Q +Y  +  EL R+   ++S V + L+E   G  TI +F  ++ FF
Sbjct:  884 YLTSQIILLLSDYWLQSWASHDRLNVSEPTDVHYLLIYLAYIGGFVFTLGVRYLLIAKITFG--SAETLHRSLLKSIIRAPLTFFEQNPVGRILNRFGKDISDIDILLLDCFSDVLYCGAC--LVTSIGIIIYIS---PYIAIPFVILIAINYIFQLFYNYSVLELKRIQSISRSPVYSLLSEVYNGLTTIRSFGQQERFF 1077          
BLAST of EY665055 vs. ExPASy Swiss-Prot
Match: MRP5_RAT (Multidrug resistance-associated protein 5 OS=Rattus norvegicus GN=Abcc5 PE=2 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 2.394e-13
Identity = 48/158 (30.38%), Postives = 78/158 (49.37%), Query Frame = 2
Query:  107 VYLLIGFVSTLFLMSRSLSSVVLGIRSSKSLFSQLLNSLFRAPMSFYDSTPLGRVLSRVSSDLSIVDLDVPFSLIFAVGATTNAYSNLGVLA-VVTWQVLFVSIPVIFLAIRLQRYYFATAKELMRLNGTTKSLVANHLAESIAGAMTIXAFEXEDXF 577
            +Y L   V  +    R +  V   +R+S  L  +L   + R+PM F+D+TP GR+L+R S D+  VD+ +PF     +      +  +G++A V  W ++ V  P++ L   L        +EL RL+  T+S   +H+  SI G  TI A+     F
Sbjct:  916 IYALSMAVMLILKAIRGVVFVKGTLRASSRLHDELFRRILRSPMKFFDTTPTGRILNRFSKDMDEVDVRLPFQAEMFIQNVILVFFCVGMIAGVFPWFLVAVG-PLLILFSVLHIVSRVLIRELKRLDNITQSPFLSHITSSIQGLATIHAYNKRQEF 1072          

HSP 2 Score: 22.7126 bits (47), Expect = 2.394e-13
Identity = 9/25 (36.00%), Postives = 13/25 (52.00%), Query Frame = 3
Query:  576 FFAKNLDLIDTNASPFFQTFAANEW 650
            F  +  +L+D N +PFF    A  W
Sbjct: 1072 FLHRYQELLDDNQAPFFLFTCAMRW 1096          
BLAST of EY665055 vs. ExPASy Swiss-Prot
Match: CFTR_SAIBB (Cystic fibrosis transmembrane conductance regulator OS=Saimiri boliviensis boliviensis GN=CFTR PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 2.753e-13
Identity = 47/166 (28.31%), Postives = 85/166 (51.20%), Query Frame = 2
Query:   86 STLRLIVVYLLIGFVSTLFLMS--RSLSSVVLGIRSSKSLFSQLLNSLFRAPMSFYDSTPLGRVLSRVSSDLSIVDLDVPFSLIFAVGATTNAYSNLGVLAVVTWQVLFVSIPVIFLAIRLQRYYFATAKELMRLNGTTKSLVANHLAESIAGAMTIXAFEXEDXF 577
            +T    V Y+ +G   TL  +   R L  V   I  SK L  ++L+S+ +APMS  ++   G +L+R S D++I+D  +P ++   +         + V++V+   +   ++PVI   I L+ Y+  T+++L +L    +S +  HL  S+ G  T+ AF  +  F
Sbjct:  909 NTSSYYVFYIYVGVADTLLALGFFRGLPLVHTLITVSKILHHKMLHSVLQAPMSTLNTLKAGGILNRFSKDIAILDDLLPLTIFDFIQLLLIVIGAIAVVSVLQPYIFLATVPVIAAFILLRAYFLQTSQQLKQLESAGRSPIFTHLVTSLKGLWTLRAFGRQPYF 1074          
BLAST of EY665055 vs. ExPASy Swiss-Prot
Match: CFTR_CALMO (Cystic fibrosis transmembrane conductance regulator OS=Callicebus moloch GN=CFTR PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 2.753e-13
Identity = 47/166 (28.31%), Postives = 85/166 (51.20%), Query Frame = 2
Query:   86 STLRLIVVYLLIGFVSTLFLMS--RSLSSVVLGIRSSKSLFSQLLNSLFRAPMSFYDSTPLGRVLSRVSSDLSIVDLDVPFSLIFAVGATTNAYSNLGVLAVVTWQVLFVSIPVIFLAIRLQRYYFATAKELMRLNGTTKSLVANHLAESIAGAMTIXAFEXEDXF 577
            +T    V Y+ +G   TL  +   R L  V   I  SK L  ++L+S+ +APMS  ++   G +L+R S D++I+D  +P ++   +         + V++V+   +   ++PVI   I L+ Y+  T+++L +L    +S +  HL  S+ G  T+ AF  +  F
Sbjct:  909 NTSSYYVFYIYVGVADTLLALGFFRGLPLVHTLITVSKILHHKMLHSVLQAPMSTLNTLKAGGILNRFSKDIAILDDLLPLTIFDFIQLLLIVIGAIAVVSVLQPYIFLATVPVIAAFILLRAYFLQTSQQLKQLESAGRSPIFTHLVTSLKGLWTLRAFGRQPYF 1074          
BLAST of EY665055 vs. ExPASy Swiss-Prot
Match: MRP5_HUMAN (Multidrug resistance-associated protein 5 OS=Homo sapiens GN=ABCC5 PE=1 SV=2)

HSP 1 Score: 73.559 bits (179), Expect = 3.110e-13
Identity = 48/158 (30.38%), Postives = 78/158 (49.37%), Query Frame = 2
Query:  107 VYLLIGFVSTLFLMSRSLSSVVLGIRSSKSLFSQLLNSLFRAPMSFYDSTPLGRVLSRVSSDLSIVDLDVPFSLIFAVGATTNAYSNLGVLA-VVTWQVLFVSIPVIFLAIRLQRYYFATAKELMRLNGTTKSLVANHLAESIAGAMTIXAFEXEDXF 577
            +Y L   V  +    R +  V   +R+S  L  +L   + R+PM F+D+TP GR+L+R S D+  VD+ +PF     +      +  +G++A V  W ++ V  P++ L   L        +EL RL+  T+S   +H+  SI G  TI A+     F
Sbjct:  917 IYALSMAVMLILKAIRGVVFVKGTLRASSRLHDELFRRILRSPMKFFDTTPTGRILNRFSKDMDEVDVRLPFQAEMFIQNVILVFFCVGMIAGVFPWFLVAVG-PLVILFSVLHIVSRVLIRELKRLDNITQSPFLSHITSSIQGLATIHAYNKGQEF 1073          

HSP 2 Score: 22.7126 bits (47), Expect = 3.110e-13
Identity = 9/25 (36.00%), Postives = 13/25 (52.00%), Query Frame = 3
Query:  576 FFAKNLDLIDTNASPFFQTFAANEW 650
            F  +  +L+D N +PFF    A  W
Sbjct: 1073 FLHRYQELLDDNQAPFFLFTCAMRW 1097          
BLAST of EY665055 vs. ExPASy Swiss-Prot
Match: CFTR_HORSE (Cystic fibrosis transmembrane conductance regulator OS=Equus caballus GN=CFTR PE=3 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 3.596e-13
Identity = 48/166 (28.92%), Postives = 85/166 (51.20%), Query Frame = 2
Query:   86 STLRLIVVYLLIGFVSTLFLMS--RSLSSVVLGIRSSKSLFSQLLNSLFRAPMSFYDSTPLGRVLSRVSSDLSIVDLDVPFSLIFAVGATTNAYSNLGVLAVVTWQVLFVSIPVIFLAIRLQRYYFATAKELMRLNGTTKSLVANHLAESIAGAMTIXAFEXEDXF 577
            ST    V Y+ +G   TL  +   R L  V   I  SK L  ++L+S+ +APMS  ++   G +L+R S D++I+D  +P ++   +         + V++V+   +   ++PVI   I L+ Y+  T+++L +L    +S +  HL  S+ G  T+ AF  +  F
Sbjct:  909 STSSYYVFYIYVGVADTLLALGLFRGLPLVHTLITVSKILHHKMLHSVLQAPMSTLNTLKAGGILNRFSKDMAILDDLLPLTIFDFIQLLLIVIGAVAVVSVLQPYIFLATVPVIAAFIILRAYFLHTSQQLKQLESEGRSPIFTHLVTSLKGLWTLRAFGRQPYF 1074          
BLAST of EY665055 vs. ExPASy Swiss-Prot
Match: CFTR_DIDMA (Cystic fibrosis transmembrane conductance regulator OS=Didelphis marsupialis virginiana GN=CFTR PE=3 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 3.596e-13
Identity = 45/165 (27.27%), Postives = 84/165 (50.91%), Query Frame = 2
Query:   89 TLRLIVVYLLIGFVSTLFLMS--RSLSSVVLGIRSSKSLFSQLLNSLFRAPMSFYDSTPLGRVLSRVSSDLSIVDLDVPFSLIFAVGATTNAYSNLGVLAVVTWQVLFVSIPVIFLAIRLQRYYFATAKELMRLNGTTKSLVANHLAESIAGAMTIXAFEXEDXF 577
            T +  + Y+ +G   T F +   R L  V   I  SK L  ++L S+ +APMS +++   G +L+R S D++I+D  +P ++   +         L V++ +   +   ++PVI   I L+ Y+  T+++L +L    ++ +  HL  S+ G  T+ AF  +  F
Sbjct:  911 TSKYYLFYIYVGIADTFFALGIFRGLPLVHTLISVSKILHHKMLYSVLKAPMSTFNTLKPGGILNRFSKDIAILDDLLPLTIFDFIQLILIVVGALIVVSAIRPYIFLATVPVIIAFIMLRAYFLQTSQQLKQLESEARTPIFTHLVTSLKGLWTLRAFGRQPYF 1075          
The following BLAST results are available for this feature:
BLAST of EY665055 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 104
Match NameE-valueIdentityDescription
MRP5_MOUSE1.844e-1330.38Multidrug resistance-associated protein 5 OS=Mus m... [more]
CFTR_ATEAB2.108e-1327.11Cystic fibrosis transmembrane conductance regulato... [more]
CFTR_AOTNA2.108e-1328.31Cystic fibrosis transmembrane conductance regulato... [more]
ABCCF_DICDI2.108e-1329.85ABC transporter C family member 15 OS=Dictyosteliu... [more]
MRP5_RAT2.394e-1330.38Multidrug resistance-associated protein 5 OS=Rattu... [more]
CFTR_SAIBB2.753e-1328.31Cystic fibrosis transmembrane conductance regulato... [more]
CFTR_CALMO2.753e-1328.31Cystic fibrosis transmembrane conductance regulato... [more]
MRP5_HUMAN3.110e-1330.38Multidrug resistance-associated protein 5 OS=Homo ... [more]
CFTR_HORSE3.596e-1328.92Cystic fibrosis transmembrane conductance regulato... [more]
CFTR_DIDMA3.596e-1327.27Cystic fibrosis transmembrane conductance regulato... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-073-E05-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY665055 ID=EY665055; Name=EY665055; organism=Citrus sinensis; type=EST; length=903bp
AGCCAGCCTCTCTCACCTTACATTTGTGATTGGTCAGATATTGCAGAACT
CTTGGCTGGCTGCCAATGTAGAAAATCCTAATGTCAGCACATTACGGCTG
ATAGTGGTTTACTTGTTGATTGGATTTGTCTCAACACTATTCCTGATGTC
TAGATCTCTCTCTAGTGTTGTTTTAGGTATTAGATCATCAAAATCTTTGT
TCTCACAGCTTTTAAATTCCCTTTTCCGTGCACCTATGTCTTTTTACGAC
TCCACACCTCTTGGAAGGGTACTTAGTCGGGTTTCTTCTGATCTGAGTAT
TGTCGACCTAGATGTTCCATTCAGTTTAATCTTTGCTGTCGGGGCTACCA
CAAATGCTTATAGTAATCTAGGAGTACTTGCTGTTGTCACATGGCAAGTC
CTATTCGTTTCCATACCAGTGATTTTCTTGGCAATTCGCTTGCAGAGATA
CTATTTTGCTACTGCAAAAGAATTGATGCGGCTTAACGGCACAACCAAGT
CCTTGGTAGCAAATCATCTAGCTGAGTCTATAGCAGGAGCCATGACAATT
ANGGCTTTTGAGGANGAAGATCNGTTTTTTTGCAAAGAACCTTGACCTCA
TTGATACCAATGCCAGTCCTTTCTTCCAAACTTTTGCAGCAAATGAGTGG
GNTGATCCAACGCCCTAGAACACTCAGTGCAACNNTGTATATCCTCGCAG
CATTCTGTATGGTTTTGCTTNCTNCTGNAACTTTTACCCCTGNATTNATT
NGAATGGCCCTTTCTTATGGTCTTCGTTAAACAGTCCCTAGTATGTCAAT
CCAAAACAGTGTACTCTANCAATTATATCATTCTGTAAAAGACTTTACCA
TACTGCATGTACCAGTGAAGCCCTGAGTAGTAGAAACAACCGCCCCACCA
CTG
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