EY665055
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY665055 vs. ExPASy Swiss-Prot
Match: CFTR_CALJA (Cystic fibrosis transmembrane conductance regulator OS=Callithrix jacchus GN=CFTR PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 3.596e-13 Identity = 46/166 (27.71%), Postives = 85/166 (51.20%), Query Frame = 2 Query: 86 STLRLIVVYLLIGFVSTLFLMS--RSLSSVVLGIRSSKSLFSQLLNSLFRAPMSFYDSTPLGRVLSRVSSDLSIVDLDVPFSLIFAVGATTNAYSNLGVLAVVTWQVLFVSIPVIFLAIRLQRYYFATAKELMRLNGTTKSLVANHLAESIAGAMTIXAFEXEDXF 577 +T V Y+ +G TL + R L V I SK L ++L+S+ +APMS ++ G +L+R S D++I+D +P ++ + + V++V+ + ++PVI + L+ Y+ T+++L +L +S + HL S+ G T+ AF + F Sbjct: 909 NTSSYYVFYIYVGVADTLLALGFFRGLPLVHTLITVSKILHHKMLHSVLQAPMSTLNTLKAGGILNRFSKDIAILDDLLPLTIFDFIQLLLIVIGAIAVVSVLQPYIFLATVPVIAAFVLLRAYFLQTSQQLKQLESAGRSPIFTHLVTSLKGLWTLRAFGRQPYF 1074
BLAST of EY665055 vs. ExPASy Swiss-Prot
Match: CFTR_MUNRE (Cystic fibrosis transmembrane conductance regulator OS=Muntiacus reevesi GN=CFTR PE=3 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 4.696e-13 Identity = 47/166 (28.31%), Postives = 85/166 (51.20%), Query Frame = 2 Query: 86 STLRLIVVYLLIGFVSTLFLMS--RSLSSVVLGIRSSKSLFSQLLNSLFRAPMSFYDSTPLGRVLSRVSSDLSIVDLDVPFSLIFAVGATTNAYSNLGVLAVVTWQVLFVSIPVIFLAIRLQRYYFATAKELMRLNGTTKSLVANHLAESIAGAMTIXAFEXEDXF 577 ST + Y+ +G TL + R L V I SK+L ++L S+ +APMS ++ G +L+R S D++++D +P ++ V + V++V+ + ++PVI I L+ Y+ T+++L +L +S + HL S+ G T+ AF + F Sbjct: 909 STSSYYIFYIYVGVADTLLALGLFRGLPLVHTLITVSKTLHHKMLQSVLQAPMSTLNTLKTGGILNRFSKDIAVLDDLLPLTIFDFVQLLLIVIGAVVVVSVLQPYIFLATVPVIAAFILLRAYFLHTSQQLKQLESEGRSPIFTHLVTSLKGLWTLRAFGRQPYF 1074
BLAST of EY665055 vs. ExPASy Swiss-Prot
Match: CFTR_MUNMU (Cystic fibrosis transmembrane conductance regulator OS=Muntiacus muntjak GN=CFTR PE=3 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 4.696e-13 Identity = 47/166 (28.31%), Postives = 85/166 (51.20%), Query Frame = 2 Query: 86 STLRLIVVYLLIGFVSTLFLMS--RSLSSVVLGIRSSKSLFSQLLNSLFRAPMSFYDSTPLGRVLSRVSSDLSIVDLDVPFSLIFAVGATTNAYSNLGVLAVVTWQVLFVSIPVIFLAIRLQRYYFATAKELMRLNGTTKSLVANHLAESIAGAMTIXAFEXEDXF 577 ST + Y+ +G TL + R L V I SK+L ++L S+ +APMS ++ G +L+R S D++++D +P ++ V + V++V+ + ++PVI I L+ Y+ T+++L +L +S + HL S+ G T+ AF + F Sbjct: 909 STSSYYIFYIYVGVADTLLALGLFRGLPLVHTLITVSKTLHHKMLQSVLQAPMSTLNTLKTGGILNRFSKDIAVLDDLLPLTIFDFVQLLLIVIGAVVVVSVLQPYIFLATVPVIAAFILLRAYFLHTSQQLKQLESEGRSPIFTHLVTSLKGLWTLRAFGRQPYF 1074
BLAST of EY665055 vs. ExPASy Swiss-Prot
Match: CFTR_CARPS (Cystic fibrosis transmembrane conductance regulator OS=Carollia perspicillata GN=CFTR PE=3 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 4.696e-13 Identity = 50/181 (27.62%), Postives = 89/181 (49.17%), Query Frame = 2 Query: 47 NSWLAANVENPNV--STLRLIVVYLLIGFVSTLFLMS--RSLSSVVLGIRSSKSLFSQLLNSLFRAPMSFYDSTPLGRVLSRVSSDLSIVDLDVPFSLIFAVGATTNAYSNLGVLAVVTWQVLFVSIPVIFLAIRLQRYYFATAKELMRLNGTTKSLVANHLAESIAGAMTIXAFEXEDXF 577 NS + N N + +T + Y+ +G +LF + R L V I SK L ++L+S+ APMS + G +L+R S D +I+D +P ++ + + V++V+ + ++PVI I L+ Y+ T+++L +L +S + HL S+ G T+ AF + F Sbjct: 895 NSTGSTNSSNAFIVTNTSHFYLFYIYVGVADSLFALGFIRGLPLVHSLITVSKILHHKMLHSVLHAPMSTLNMLKAGEILNRFSKDTAILDDLLPLTIFDFIQLALIVIGAIAVVSVLQPYIFLATVPVITAFITLRAYFLPTSQQLKQLESEGRSPIFTHLVTSLRGLWTLRAFGRQPYF 1075
BLAST of EY665055 vs. ExPASy Swiss-Prot
Match: CFTR_BOVIN (Cystic fibrosis transmembrane conductance regulator OS=Bos taurus GN=CFTR PE=2 SV=2) HSP 1 Score: 75.485 bits (184), Expect = 4.696e-13 Identity = 47/166 (28.31%), Postives = 85/166 (51.20%), Query Frame = 2 Query: 86 STLRLIVVYLLIGFVSTLFLMS--RSLSSVVLGIRSSKSLFSQLLNSLFRAPMSFYDSTPLGRVLSRVSSDLSIVDLDVPFSLIFAVGATTNAYSNLGVLAVVTWQVLFVSIPVIFLAIRLQRYYFATAKELMRLNGTTKSLVANHLAESIAGAMTIXAFEXEDXF 577 ST + Y+ +G TL + R L V I SK+L ++L S+ +APMS ++ G +L+R S D++++D +P ++ V + V++V+ + ++PVI I L+ Y+ T+++L +L +S + HL S+ G T+ AF + F Sbjct: 909 STSSYYIFYIYVGVADTLLALGLFRGLPLVHTLITVSKTLHHKMLQSVLQAPMSTLNTLKTGGILNRFSKDIAVLDDLLPLTIFDFVQLLLIVIGAVVVVSVLQPYIFLATVPVIAAFILLRAYFLHTSQQLKQLESEGRSPIFTHLVTSLKGLWTLRAFGRQPYF 1074
BLAST of EY665055 vs. ExPASy Swiss-Prot
Match: ABCCA_DICDI (ABC transporter C family member 10 OS=Dictyostelium discoideum GN=abcC10 PE=3 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 4.696e-13 Identity = 35/154 (22.73%), Postives = 84/154 (54.55%), Query Frame = 2 Query: 107 VYLLIGFVSTLFLMSRSLSSVVLGIRSSKSLFSQLLNSLFRAPMSFYDSTPLGRVLSRVSSDLSIVDLDVPFSLIFAVGATTNAYSNLGVLAVVTWQVLFVSIPVIFLAIRLQRYYFATAKELMRLNGTTKSLVANHLAESIAGAMTIXAFEXE 568 +Y+ +G + + ++ + +S+++ +L N+L + PM F+D TP+GR+++R + DL +D + S+ + + + +++++ +L P+ + LQ +Y T++ L R+ T+S + NH +E++ G ++I A++ + Sbjct: 778 IYIGLGMAAVFISVCKNFIYYEYSVYASRAIHHELFNALLKKPMYFFDQTPIGRIINRFTRDLDGIDNLIATSISTFLTLMLTVIATIILVSIIVPFLLIPLAPISIIFFFLQYFYRYTSRGLQRIEAITRSPIFNHFSETLNGVVSIRAYKKQ 931
BLAST of EY665055 vs. ExPASy Swiss-Prot
Match: ABCC1_DICDI (ABC transporter C family member 1 OS=Dictyostelium discoideum GN=abcC1 PE=3 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 4.696e-13 Identity = 56/196 (28.57%), Postives = 107/196 (54.59%), Query Frame = 2 Query: 17 LTFVIGQIL---QNSWLAANVEN--PNVSTLRLIVVYLL--IGFVSTLFLMSRSLSSVVLGIRSSKSLFSQLLNSLFRAPMSFYDSTPLGRVLSRVSSDLSIVDLDV--PFSLIFAVGATTNAYSNLGVLAVVTWQVLFVSIPVIFLAIRLQRYYFATAKELMRLNGTTKSLVANHLAESIAGAMTIXAFEXEDXF 577 + ++I QI+ + WL+ + P+ + I +YLL +GF+ +FL+ R + +SK+L LL S+ A F+D+ P GR+L+R S D+S VDL + FS + G+T ++G++ ++ ++ + +I + +QR Y +++EL RL ++S + + L ES G +TI +++ ++ F Sbjct: 784 IVYMISQIIYQMSDFWLSTWSQRSIPDKTDKYYISIYLLFIVGFI--IFLVIRYFMMAHVTFSASKNLHQSLLKSVGFASCQFFDTNPSGRILNRFSKDISDVDLLLFDLFSDVLYCGST--VLVSIGIMIYISPLIIIPFLLLIGIYYFIQRLYTESSRELKRLEAISRSPIFSLLQESFNGLVTIRSYKQQNKF 975
BLAST of EY665055 vs. ExPASy Swiss-Prot
Match: CFTR_RHIFE (Cystic fibrosis transmembrane conductance regulator OS=Rhinolophus ferrumequinum GN=CFTR PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 6.133e-13 Identity = 48/181 (26.52%), Postives = 91/181 (50.28%), Query Frame = 2 Query: 47 NSWLAANVENPNV--STLRLIVVYLLIGFVSTLFLMS--RSLSSVVLGIRSSKSLFSQLLNSLFRAPMSFYDSTPLGRVLSRVSSDLSIVDLDVPFSLIFAVGATTNAYSNLGVLAVVTWQVLFVSIPVIFLAIRLQRYYFATAKELMRLNGTTKSLVANHLAESIAGAMTIXAFEXEDXF 577 NS + N +P + ST + Y+ +G +L + R L V I SK L ++L+S+ APMS ++ G +L+R S D++I+D +P ++ + + V++++ + ++PVI + L+ Y+ T+++L +L +S + HL S+ G T+ AF + F Sbjct: 895 NSTRSTNNTSPVIITSTSAFYMFYIYVGVADSLLALGFLRGLPLVHTLITVSKILHQKMLHSVLHAPMSTLNTLKAGAILNRFSKDIAILDDLLPLTIFDFIQLVLIVIGAVVVVSILKPYIFLAAVPVIIAFVILRAYFLQTSQQLKQLESEGRSPIFTHLVTSLKGLWTLRAFGRQPYF 1075
BLAST of EY665055 vs. ExPASy Swiss-Prot
Match: CFTR_OTOGA (Cystic fibrosis transmembrane conductance regulator OS=Otolemur garnettii GN=CFTR PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 6.133e-13 Identity = 48/166 (28.92%), Postives = 84/166 (50.60%), Query Frame = 2 Query: 86 STLRLIVVYLLIGFVSTLFLMS--RSLSSVVLGIRSSKSLFSQLLNSLFRAPMSFYDSTPLGRVLSRVSSDLSIVDLDVPFSLIFAVGATTNAYSNLGVLAVVTWQVLFVSIPVIFLAIRLQRYYFATAKELMRLNGTTKSLVANHLAESIAGAMTIXAFEXEDXF 577 ST + Y+ +G TL + R L V I SK L ++L+S+ RAPMS + G +L+R S D++I+D +P ++ V + V++V+ + ++PVI + L+ Y+ T+++L +L +S + HL S+ G T+ AF + F Sbjct: 910 STSSYYLFYIYVGVADTLLALGFFRGLPLVHTLITVSKILHHRMLHSVLRAPMSTLNMLKAGGILNRFSKDIAILDDLLPLTIFDFVQLLLIVIGAVAVVSVLQPYIFLATVPVIAAFVILRGYFLHTSQQLKQLESEGRSPIFTHLVTSLKGLWTLRAFGRQPYF 1075
BLAST of EY665055 vs. ExPASy Swiss-Prot
Match: CFTR_CANFA (Cystic fibrosis transmembrane conductance regulator OS=Canis familiaris GN=CFTR PE=2 SV=2) HSP 1 Score: 75.0998 bits (183), Expect = 6.133e-13 Identity = 47/166 (28.31%), Postives = 85/166 (51.20%), Query Frame = 2 Query: 86 STLRLIVVYLLIGFVSTLFLMS--RSLSSVVLGIRSSKSLFSQLLNSLFRAPMSFYDSTPLGRVLSRVSSDLSIVDLDVPFSLIFAVGATTNAYSNLGVLAVVTWQVLFVSIPVIFLAIRLQRYYFATAKELMRLNGTTKSLVANHLAESIAGAMTIXAFEXEDXF 577 ST + Y+ +G TL + R L V I SK L ++L+S+ +APMS ++ G +L+R S D++I+D +P ++ + + V++V+ + ++PVI I L+ Y+ T+++L +L +S + HL S+ G T+ AF + F Sbjct: 910 STSAYYIFYIYVGVADTLLALGLFRGLPLVHTLITVSKILHHKMLHSVLQAPMSTLNTLKAGGILNRFSKDIAILDDLLPLTIFDFIQLLLIVIGAVAVVSVLQPYIFLATVPVIAAFIILRAYFLHTSQQLKQLESEGRSPIFTHLLTSLKGLWTLRAFGRQPYF 1075 The following BLAST results are available for this feature:
BLAST of EY665055 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 104
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Sequences
The
following sequences are available for this feature:
EST sequence >EY665055 ID=EY665055; Name=EY665055; organism=Citrus sinensis; type=EST; length=903bpback to top |