EY665055
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY665055 vs. ExPASy Swiss-Prot
Match: CFTR_SQUAC (Cystic fibrosis transmembrane conductance regulator OS=Squalus acanthias GN=CFTR PE=2 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 8.010e-13 Identity = 43/160 (26.88%), Postives = 81/160 (50.62%), Query Frame = 2 Query: 104 VVYLLIGFVSTLFLMS--RSLSSVVLGIRSSKSLFSQLLNSLFRAPMSFYDSTPLGRVLSRVSSDLSIVDLDVPFSLIFAVGATTNAYSNLGVLAVVTWQVLFVSIPVIFLAIRLQRYYFATAKELMRLNGTTKSLVANHLAESIAGAMTIXAFEXEDXF 577 + Y+ +G + + R L V + SK L Q+L+S+ + PM+ ++ GR+L+R D +I+D +P ++ V + V++V+ L +IPV + I L+ Y+ T+++L +L +S + +HL S+ G T+ AF + F Sbjct: 929 IFYIYVGLADSFLALGVIRGLPLVHTLVTVSKDLHKQMLHSVLQGPMTAFNKMKAGRILNRFIKDTAIIDDMLPLTVFDFVQLILIVVGAICVVSVLQPYTLLAAIPVAVIFIMLRAYFLRTSQQLKQLESEARSPIFSHLITSLRGLWTVRAFGRQSYF 1088
BLAST of EY665055 vs. ExPASy Swiss-Prot
Match: CFTR_SHEEP (Cystic fibrosis transmembrane conductance regulator OS=Ovis aries GN=CFTR PE=1 SV=2) HSP 1 Score: 74.7146 bits (182), Expect = 8.010e-13 Identity = 46/166 (27.71%), Postives = 85/166 (51.20%), Query Frame = 2 Query: 86 STLRLIVVYLLIGFVSTLFLMS--RSLSSVVLGIRSSKSLFSQLLNSLFRAPMSFYDSTPLGRVLSRVSSDLSIVDLDVPFSLIFAVGATTNAYSNLGVLAVVTWQVLFVSIPVIFLAIRLQRYYFATAKELMRLNGTTKSLVANHLAESIAGAMTIXAFEXEDXF 577 ST + Y+ +G TL + R L V I SK+L ++L S+ +APMS ++ G +L+R S D++++D +P ++ + + V++V+ + ++PVI I L+ Y+ T+++L +L +S + HL S+ G T+ AF + F Sbjct: 909 STSSYYIFYIYVGVADTLLALGLFRGLPLVHTLITVSKTLHHKMLQSVLQAPMSTLNTLKTGGILNRFSKDIAVLDDLLPLTIFDFIQLLLIVIGAVVVVSVLQPYIFLATVPVIAAFILLRGYFLHTSQQLKQLESEGRSPIFTHLVTSLKGLWTLRAFGRQPYF 1074
BLAST of EY665055 vs. ExPASy Swiss-Prot
Match: ABCC9_DICDI (ABC transporter C family member 9 OS=Dictyostelium discoideum GN=abcC9 PE=3 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 8.010e-13 Identity = 56/198 (28.28%), Postives = 94/198 (47.47%), Query Frame = 2 Query: 17 LTFVIGQI---LQNSWLAANVENP--NVSTLRLIVVYLLIGFVSTLFLMSRSLSSVVLGIRSSKSLFSQLLNSLFRAPMSFYDSTPLGRVLSRVSSDLSIVDLDV------PFSLIFAVGATTNAYSNLGVLAVVTWQVLFVSIPVIFLAIRLQRYYFATAKELMRLNGTTKSLVANHLAESIAGAMTIXAFEXEDXF 577 L F+IG I L + WL E S I+ ++ I VS + + R +G +SSK L L+NS+ ++P+ F+DS P GR+L+R S+D+S +D + IFA+ + + + +V + +L + IF Y + +EL R ++S + + L+E G TI AF+ + F Sbjct: 788 LVFLIGLIVNRLSDFWLTIWTEQSFKEKSQTFYIICFVSIFIVSLILIFIRYSLVAKIGFKSSKKLHDLLINSISKSPIQFFDSNPSGRILNRFSNDISDIDTSMIDMFSDTLEYIFAIVVGIFSIIYINPMTIVPFLILSMFYYQIF------NIYRVSVRELNRCKSISQSPIISFLSECCNGLSTIRAFKQQSRF 979
BLAST of EY665055 vs. ExPASy Swiss-Prot
Match: CFTR_XENLA (Cystic fibrosis transmembrane conductance regulator OS=Xenopus laevis GN=cftr PE=2 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 1.046e-12 Identity = 45/160 (28.12%), Postives = 82/160 (51.25%), Query Frame = 2 Query: 104 VVYLLIGFVSTLFLMS--RSLSSVVLGIRSSKSLFSQLLNSLFRAPMSFYDSTPLGRVLSRVSSDLSIVDLDVPFSLIFAVGATTNAYSNLGVLAVVTWQVLFVSIPVIFLAIRLQRYYFATAKELMRLNGTTKSLVANHLAESIAGAMTIXAFEXEDXF 577 V Y+ +G +L + R L V I SK L ++L+++ APMS +++ GR+L+R S D +I+D +P S+ + V++++ + ++PVI I L+ Y+ T+++L +L +S + HL S+ G T+ AF + F Sbjct: 920 VFYIYVGVADSLLALGIFRGLPLVHSLISVSKVLHKKMLHAILHAPMSTFNTMRAGRILNRFSKDTAILDDILPLSIFDLTQLVLIVIGAITVVSLLEPYIFLATVPVIVAFILLRSYFLHTSQQLKQLESKARSPIFAHLITSLKGLWTLRAFGRQPYF 1079
BLAST of EY665055 vs. ExPASy Swiss-Prot
Match: CFTR_DASNO (Cystic fibrosis transmembrane conductance regulator OS=Dasypus novemcinctus GN=CFTR PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 1.046e-12 Identity = 44/166 (26.51%), Postives = 84/166 (50.60%), Query Frame = 2 Query: 86 STLRLIVVYLLIGFVSTLFLMS--RSLSSVVLGIRSSKSLFSQLLNSLFRAPMSFYDSTPLGRVLSRVSSDLSIVDLDVPFSLIFAVGATTNAYSNLGVLAVVTWQVLFVSIPVIFLAIRLQRYYFATAKELMRLNGTTKSLVANHLAESIAGAMTIXAFEXEDXF 577 ST +Y+ +G T + R L V I SK L ++L+S+ +APMS ++ G +L+R S D++I+D +P ++ + + V++++ + ++PVI + L+ Y+ T+++L +L +S + HL S+ G T+ AF + F Sbjct: 910 STSSFYFLYIYVGVADTFLALGLFRGLPLVHTLITVSKILHHKMLHSVLQAPMSTLNTLKAGGILNRFSKDIAILDDLLPLTIFDFIQLLLIVIGAVAVVSILKPYIFLATVPVIVAFVLLRAYFLHTSQQLKQLESEARSPIFTHLVTSLKGLWTLRAFGRQPYF 1075
BLAST of EY665055 vs. ExPASy Swiss-Prot
Match: CFTR_RABIT (Cystic fibrosis transmembrane conductance regulator OS=Oryctolagus cuniculus GN=CFTR PE=2 SV=4) HSP 1 Score: 73.9442 bits (180), Expect = 1.366e-12 Identity = 45/158 (28.48%), Postives = 82/158 (51.90%), Query Frame = 2 Query: 110 YLLIGFVSTLFLMS--RSLSSVVLGIRSSKSLFSQLLNSLFRAPMSFYDSTPLGRVLSRVSSDLSIVDLDVPFSLIFAVGATTNAYSNLGVLAVVTWQVLFVSIPVIFLAIRLQRYYFATAKELMRLNGTTKSLVANHLAESIAGAMTIXAFEXEDXF 577 Y+ +G TL + R L V I SK L ++L+S+ +APMS ++ G +L+R S D++I+D +P ++ + + V++V+ + ++PVI I L+ Y+ T+++L +L +S + HL S+ G T+ AF + F Sbjct: 917 YIYVGVADTLLALGLFRGLPLVHTLITVSKILHHKMLHSVLQAPMSTLNTLKAGGILNRFSKDIAILDDLLPLTIFDFIQLLLIVVGAIAVVSVLQPYIFLATVPVIAAFILLRAYFLHTSQQLKQLESEGRSPIFTHLVTSLKGLWTLRAFGRQPYF 1074
BLAST of EY665055 vs. ExPASy Swiss-Prot
Match: ABCC2_DICDI (ABC transporter C family member 2 OS=Dictyostelium discoideum GN=abcC2 PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 1.366e-12 Identity = 59/195 (30.26%), Postives = 96/195 (49.23%), Query Frame = 2 Query: 23 FVIGQI---LQNSWLA--ANVENPNVSTLRLIVVYLLIGFVSTLFLMSRSLSSVVLGIRSSKSLFSQLLNSLFRAPMSFYDSTPLGRVLSRVSSDLSIVDLDV--PFSLIFAVGATTNAYSNLGVLAVVTWQVLFVSIPVIFLAI---RLQRYYFATAKELMRLNGTTKSLVANHLAESIAGAMTIXAFEXEDXF 577 + I QI L + WL N E I+ Y + +FL+ R + +SK L S+LLNS+ A F+D+ P GR+L+R S D+S +DL + FS + G+T + L ++ + +SIP L + +Q+ Y A++ EL R+ T+S V + LAE+ G +TI ++ + F Sbjct: 821 YFISQIIFQLSDFWLTIWTNDETNQHDDKYYILYYCIFIGAFIVFLVVRYFMMASITFAASKKLHSELLNSVAFASCQFFDTNPSGRILNRFSKDISDIDLILMENFSDVLQCGSTV-----VVALFMMIYITPLISIPFAILVVVYYVIQKLYRASSVELKRMESITRSPVFSLLAEAYNGLVTIRCYQQQKRF 1010
BLAST of EY665055 vs. ExPASy Swiss-Prot
Match: CFTR_MUSPF (Cystic fibrosis transmembrane conductance regulator OS=Mustela putorius furo GN=CFTR PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.784e-12 Identity = 47/166 (28.31%), Postives = 84/166 (50.60%), Query Frame = 2 Query: 86 STLRLIVVYLLIGFVSTLFLMS--RSLSSVVLGIRSSKSLFSQLLNSLFRAPMSFYDSTPLGRVLSRVSSDLSIVDLDVPFSLIFAVGATTNAYSNLGVLAVVTWQVLFVSIPVIFLAIRLQRYYFATAKELMRLNGTTKSLVANHLAESIAGAMTIXAFEXEDXF 577 ST V Y+ +G TL + R L V I SK L ++L+++ +APMS ++ G +L+R S D++I+D +P ++ V + V++ + + ++PVI I L+ Y+ T+++L +L +S + HL S+ G T+ AF + F Sbjct: 911 STSTYYVFYIYVGVADTLLALGFFRGLPLVHTLITVSKILHHKMLHAVLQAPMSTLNALKAGGILNRFSKDIAILDDLLPLTIFDFVQLLLIVIGAVTVVSALQPYIFLATVPVIAAFIMLRAYFLHTSQQLKQLESEGRSPIFTHLVTSLKGLWTLRAFGRQPYF 1076
BLAST of EY665055 vs. ExPASy Swiss-Prot
Match: CFTR_PIG (Cystic fibrosis transmembrane conductance regulator OS=Sus scrofa GN=CFTR PE=2 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 2.331e-12 Identity = 46/166 (27.71%), Postives = 84/166 (50.60%), Query Frame = 2 Query: 86 STLRLIVVYLLIGFVSTLFLMS--RSLSSVVLGIRSSKSLFSQLLNSLFRAPMSFYDSTPLGRVLSRVSSDLSIVDLDVPFSLIFAVGATTNAYSNLGVLAVVTWQVLFVSIPVIFLAIRLQRYYFATAKELMRLNGTTKSLVANHLAESIAGAMTIXAFEXEDXF 577 ST V Y+ +G L + R L V I SK L ++L+S+ +APMS ++ G +L+R S D++++D +P ++ + + V++V+ + ++PVI I L+ Y+ T+++L +L +S + HL S+ G T+ AF + F Sbjct: 910 STSAYYVFYIYVGVADGLLALGLFRGLPLVHTLITVSKILHRKMLHSVLQAPMSTLNTLKAGGILNRFSKDIAVLDDLLPLTIFDFIQLLLIVIGAVAVVSVLKPYIFLATVPVIVAFILLRAYFLHTSQQLKQLESEGRSPIFTHLITSLKGLWTLRAFGRQPYF 1075
BLAST of EY665055 vs. ExPASy Swiss-Prot
Match: YOR1_YEAST (Oligomycin resistance ATP-dependent permease YOR1 OS=Saccharomyces cerevisiae GN=YOR1 PE=1 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 5.192e-12 Identity = 48/186 (25.81%), Postives = 91/186 (48.92%), Query Frame = 2 Query: 38 ILQNSWLAANVENP--NVSTLRLIVVYLLIGFVSTLFLMSRSLSSVVLGIRSSKSLFSQLLNSLFRAPMSFYDSTPLGRVLSRVSSDLSIVDLDVPFSLIFAVGATTNAYSNLGVLAVVTWQVLFVSIP-VIFLAIRLQRYYFATAKELMRLNGTTKSLVANHLAESIAGAMTIXAFEXEDXFFCK 586 + + WL+ EN N + +Y F + +F+ + +GI +SK L + + + PMS+ D+TPLGR+L+R + D +D ++ SL N + V+ +V ++IP ++ + + + +Y ++ +E+ RL +S V N+L E + G TI A+ ++ F K Sbjct: 912 LFSSVWLSYWTENKFKNRPPSFYMGLYSFFVFAAFIFMNGQFTILCAMGIMASKWLNLRAVKRILHTPMSYIDTTPLGRILNRFTKDTDSLDNELTESLRLMTSQFANIV-GVCVMCIVYLPWFAIAIPFLLVIFVLIADHYQSSGREIKRLEAVQRSFVYNNLNEVLGGMDTIKAYRSQERFLAK 1096 The following BLAST results are available for this feature:
BLAST of EY665055 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 104
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Sequences
The
following sequences are available for this feature:
EST sequence >EY665055 ID=EY665055; Name=EY665055; organism=Citrus sinensis; type=EST; length=903bpback to top |