EY665055

Overview
NameEY665055
Unique NameEY665055
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length903
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY665055 vs. ExPASy Swiss-Prot
Match: CFTR_SQUAC (Cystic fibrosis transmembrane conductance regulator OS=Squalus acanthias GN=CFTR PE=2 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 8.010e-13
Identity = 43/160 (26.88%), Postives = 81/160 (50.62%), Query Frame = 2
Query:  104 VVYLLIGFVSTLFLMS--RSLSSVVLGIRSSKSLFSQLLNSLFRAPMSFYDSTPLGRVLSRVSSDLSIVDLDVPFSLIFAVGATTNAYSNLGVLAVVTWQVLFVSIPVIFLAIRLQRYYFATAKELMRLNGTTKSLVANHLAESIAGAMTIXAFEXEDXF 577
            + Y+ +G   +   +   R L  V   +  SK L  Q+L+S+ + PM+ ++    GR+L+R   D +I+D  +P ++   V         + V++V+    L  +IPV  + I L+ Y+  T+++L +L    +S + +HL  S+ G  T+ AF  +  F
Sbjct:  929 IFYIYVGLADSFLALGVIRGLPLVHTLVTVSKDLHKQMLHSVLQGPMTAFNKMKAGRILNRFIKDTAIIDDMLPLTVFDFVQLILIVVGAICVVSVLQPYTLLAAIPVAVIFIMLRAYFLRTSQQLKQLESEARSPIFSHLITSLRGLWTVRAFGRQSYF 1088          
BLAST of EY665055 vs. ExPASy Swiss-Prot
Match: CFTR_SHEEP (Cystic fibrosis transmembrane conductance regulator OS=Ovis aries GN=CFTR PE=1 SV=2)

HSP 1 Score: 74.7146 bits (182), Expect = 8.010e-13
Identity = 46/166 (27.71%), Postives = 85/166 (51.20%), Query Frame = 2
Query:   86 STLRLIVVYLLIGFVSTLFLMS--RSLSSVVLGIRSSKSLFSQLLNSLFRAPMSFYDSTPLGRVLSRVSSDLSIVDLDVPFSLIFAVGATTNAYSNLGVLAVVTWQVLFVSIPVIFLAIRLQRYYFATAKELMRLNGTTKSLVANHLAESIAGAMTIXAFEXEDXF 577
            ST    + Y+ +G   TL  +   R L  V   I  SK+L  ++L S+ +APMS  ++   G +L+R S D++++D  +P ++   +         + V++V+   +   ++PVI   I L+ Y+  T+++L +L    +S +  HL  S+ G  T+ AF  +  F
Sbjct:  909 STSSYYIFYIYVGVADTLLALGLFRGLPLVHTLITVSKTLHHKMLQSVLQAPMSTLNTLKTGGILNRFSKDIAVLDDLLPLTIFDFIQLLLIVIGAVVVVSVLQPYIFLATVPVIAAFILLRGYFLHTSQQLKQLESEGRSPIFTHLVTSLKGLWTLRAFGRQPYF 1074          
BLAST of EY665055 vs. ExPASy Swiss-Prot
Match: ABCC9_DICDI (ABC transporter C family member 9 OS=Dictyostelium discoideum GN=abcC9 PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 8.010e-13
Identity = 56/198 (28.28%), Postives = 94/198 (47.47%), Query Frame = 2
Query:   17 LTFVIGQI---LQNSWLAANVENP--NVSTLRLIVVYLLIGFVSTLFLMSRSLSSVVLGIRSSKSLFSQLLNSLFRAPMSFYDSTPLGRVLSRVSSDLSIVDLDV------PFSLIFAVGATTNAYSNLGVLAVVTWQVLFVSIPVIFLAIRLQRYYFATAKELMRLNGTTKSLVANHLAESIAGAMTIXAFEXEDXF 577
            L F+IG I   L + WL    E      S    I+ ++ I  VS + +  R      +G +SSK L   L+NS+ ++P+ F+DS P GR+L+R S+D+S +D  +          IFA+     +   +  + +V + +L +    IF        Y  + +EL R    ++S + + L+E   G  TI AF+ +  F
Sbjct:  788 LVFLIGLIVNRLSDFWLTIWTEQSFKEKSQTFYIICFVSIFIVSLILIFIRYSLVAKIGFKSSKKLHDLLINSISKSPIQFFDSNPSGRILNRFSNDISDIDTSMIDMFSDTLEYIFAIVVGIFSIIYINPMTIVPFLILSMFYYQIF------NIYRVSVRELNRCKSISQSPIISFLSECCNGLSTIRAFKQQSRF 979          
BLAST of EY665055 vs. ExPASy Swiss-Prot
Match: CFTR_XENLA (Cystic fibrosis transmembrane conductance regulator OS=Xenopus laevis GN=cftr PE=2 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 1.046e-12
Identity = 45/160 (28.12%), Postives = 82/160 (51.25%), Query Frame = 2
Query:  104 VVYLLIGFVSTLFLMS--RSLSSVVLGIRSSKSLFSQLLNSLFRAPMSFYDSTPLGRVLSRVSSDLSIVDLDVPFSLIFAVGATTNAYSNLGVLAVVTWQVLFVSIPVIFLAIRLQRYYFATAKELMRLNGTTKSLVANHLAESIAGAMTIXAFEXEDXF 577
            V Y+ +G   +L  +   R L  V   I  SK L  ++L+++  APMS +++   GR+L+R S D +I+D  +P S+             + V++++   +   ++PVI   I L+ Y+  T+++L +L    +S +  HL  S+ G  T+ AF  +  F
Sbjct:  920 VFYIYVGVADSLLALGIFRGLPLVHSLISVSKVLHKKMLHAILHAPMSTFNTMRAGRILNRFSKDTAILDDILPLSIFDLTQLVLIVIGAITVVSLLEPYIFLATVPVIVAFILLRSYFLHTSQQLKQLESKARSPIFAHLITSLKGLWTLRAFGRQPYF 1079          
BLAST of EY665055 vs. ExPASy Swiss-Prot
Match: CFTR_DASNO (Cystic fibrosis transmembrane conductance regulator OS=Dasypus novemcinctus GN=CFTR PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 1.046e-12
Identity = 44/166 (26.51%), Postives = 84/166 (50.60%), Query Frame = 2
Query:   86 STLRLIVVYLLIGFVSTLFLMS--RSLSSVVLGIRSSKSLFSQLLNSLFRAPMSFYDSTPLGRVLSRVSSDLSIVDLDVPFSLIFAVGATTNAYSNLGVLAVVTWQVLFVSIPVIFLAIRLQRYYFATAKELMRLNGTTKSLVANHLAESIAGAMTIXAFEXEDXF 577
            ST     +Y+ +G   T   +   R L  V   I  SK L  ++L+S+ +APMS  ++   G +L+R S D++I+D  +P ++   +         + V++++   +   ++PVI   + L+ Y+  T+++L +L    +S +  HL  S+ G  T+ AF  +  F
Sbjct:  910 STSSFYFLYIYVGVADTFLALGLFRGLPLVHTLITVSKILHHKMLHSVLQAPMSTLNTLKAGGILNRFSKDIAILDDLLPLTIFDFIQLLLIVIGAVAVVSILKPYIFLATVPVIVAFVLLRAYFLHTSQQLKQLESEARSPIFTHLVTSLKGLWTLRAFGRQPYF 1075          
BLAST of EY665055 vs. ExPASy Swiss-Prot
Match: CFTR_RABIT (Cystic fibrosis transmembrane conductance regulator OS=Oryctolagus cuniculus GN=CFTR PE=2 SV=4)

HSP 1 Score: 73.9442 bits (180), Expect = 1.366e-12
Identity = 45/158 (28.48%), Postives = 82/158 (51.90%), Query Frame = 2
Query:  110 YLLIGFVSTLFLMS--RSLSSVVLGIRSSKSLFSQLLNSLFRAPMSFYDSTPLGRVLSRVSSDLSIVDLDVPFSLIFAVGATTNAYSNLGVLAVVTWQVLFVSIPVIFLAIRLQRYYFATAKELMRLNGTTKSLVANHLAESIAGAMTIXAFEXEDXF 577
            Y+ +G   TL  +   R L  V   I  SK L  ++L+S+ +APMS  ++   G +L+R S D++I+D  +P ++   +         + V++V+   +   ++PVI   I L+ Y+  T+++L +L    +S +  HL  S+ G  T+ AF  +  F
Sbjct:  917 YIYVGVADTLLALGLFRGLPLVHTLITVSKILHHKMLHSVLQAPMSTLNTLKAGGILNRFSKDIAILDDLLPLTIFDFIQLLLIVVGAIAVVSVLQPYIFLATVPVIAAFILLRAYFLHTSQQLKQLESEGRSPIFTHLVTSLKGLWTLRAFGRQPYF 1074          
BLAST of EY665055 vs. ExPASy Swiss-Prot
Match: ABCC2_DICDI (ABC transporter C family member 2 OS=Dictyostelium discoideum GN=abcC2 PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.366e-12
Identity = 59/195 (30.26%), Postives = 96/195 (49.23%), Query Frame = 2
Query:   23 FVIGQI---LQNSWLA--ANVENPNVSTLRLIVVYLLIGFVSTLFLMSRSLSSVVLGIRSSKSLFSQLLNSLFRAPMSFYDSTPLGRVLSRVSSDLSIVDLDV--PFSLIFAVGATTNAYSNLGVLAVVTWQVLFVSIPVIFLAI---RLQRYYFATAKELMRLNGTTKSLVANHLAESIAGAMTIXAFEXEDXF 577
            + I QI   L + WL    N E         I+ Y +      +FL+ R      +   +SK L S+LLNS+  A   F+D+ P GR+L+R S D+S +DL +   FS +   G+T      +  L ++ +    +SIP   L +    +Q+ Y A++ EL R+   T+S V + LAE+  G +TI  ++ +  F
Sbjct:  821 YFISQIIFQLSDFWLTIWTNDETNQHDDKYYILYYCIFIGAFIVFLVVRYFMMASITFAASKKLHSELLNSVAFASCQFFDTNPSGRILNRFSKDISDIDLILMENFSDVLQCGSTV-----VVALFMMIYITPLISIPFAILVVVYYVIQKLYRASSVELKRMESITRSPVFSLLAEAYNGLVTIRCYQQQKRF 1010          
BLAST of EY665055 vs. ExPASy Swiss-Prot
Match: CFTR_MUSPF (Cystic fibrosis transmembrane conductance regulator OS=Mustela putorius furo GN=CFTR PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.784e-12
Identity = 47/166 (28.31%), Postives = 84/166 (50.60%), Query Frame = 2
Query:   86 STLRLIVVYLLIGFVSTLFLMS--RSLSSVVLGIRSSKSLFSQLLNSLFRAPMSFYDSTPLGRVLSRVSSDLSIVDLDVPFSLIFAVGATTNAYSNLGVLAVVTWQVLFVSIPVIFLAIRLQRYYFATAKELMRLNGTTKSLVANHLAESIAGAMTIXAFEXEDXF 577
            ST    V Y+ +G   TL  +   R L  V   I  SK L  ++L+++ +APMS  ++   G +L+R S D++I+D  +P ++   V         + V++ +   +   ++PVI   I L+ Y+  T+++L +L    +S +  HL  S+ G  T+ AF  +  F
Sbjct:  911 STSTYYVFYIYVGVADTLLALGFFRGLPLVHTLITVSKILHHKMLHAVLQAPMSTLNALKAGGILNRFSKDIAILDDLLPLTIFDFVQLLLIVIGAVTVVSALQPYIFLATVPVIAAFIMLRAYFLHTSQQLKQLESEGRSPIFTHLVTSLKGLWTLRAFGRQPYF 1076          
BLAST of EY665055 vs. ExPASy Swiss-Prot
Match: CFTR_PIG (Cystic fibrosis transmembrane conductance regulator OS=Sus scrofa GN=CFTR PE=2 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 2.331e-12
Identity = 46/166 (27.71%), Postives = 84/166 (50.60%), Query Frame = 2
Query:   86 STLRLIVVYLLIGFVSTLFLMS--RSLSSVVLGIRSSKSLFSQLLNSLFRAPMSFYDSTPLGRVLSRVSSDLSIVDLDVPFSLIFAVGATTNAYSNLGVLAVVTWQVLFVSIPVIFLAIRLQRYYFATAKELMRLNGTTKSLVANHLAESIAGAMTIXAFEXEDXF 577
            ST    V Y+ +G    L  +   R L  V   I  SK L  ++L+S+ +APMS  ++   G +L+R S D++++D  +P ++   +         + V++V+   +   ++PVI   I L+ Y+  T+++L +L    +S +  HL  S+ G  T+ AF  +  F
Sbjct:  910 STSAYYVFYIYVGVADGLLALGLFRGLPLVHTLITVSKILHRKMLHSVLQAPMSTLNTLKAGGILNRFSKDIAVLDDLLPLTIFDFIQLLLIVIGAVAVVSVLKPYIFLATVPVIVAFILLRAYFLHTSQQLKQLESEGRSPIFTHLITSLKGLWTLRAFGRQPYF 1075          
BLAST of EY665055 vs. ExPASy Swiss-Prot
Match: YOR1_YEAST (Oligomycin resistance ATP-dependent permease YOR1 OS=Saccharomyces cerevisiae GN=YOR1 PE=1 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 5.192e-12
Identity = 48/186 (25.81%), Postives = 91/186 (48.92%), Query Frame = 2
Query:   38 ILQNSWLAANVENP--NVSTLRLIVVYLLIGFVSTLFLMSRSLSSVVLGIRSSKSLFSQLLNSLFRAPMSFYDSTPLGRVLSRVSSDLSIVDLDVPFSLIFAVGATTNAYSNLGVLAVVTWQVLFVSIP-VIFLAIRLQRYYFATAKELMRLNGTTKSLVANHLAESIAGAMTIXAFEXEDXFFCK 586
            +  + WL+   EN   N      + +Y    F + +F+  +      +GI +SK L  + +  +   PMS+ D+TPLGR+L+R + D   +D ++  SL        N    + V+ +V      ++IP ++ + + +  +Y ++ +E+ RL    +S V N+L E + G  TI A+  ++ F  K
Sbjct:  912 LFSSVWLSYWTENKFKNRPPSFYMGLYSFFVFAAFIFMNGQFTILCAMGIMASKWLNLRAVKRILHTPMSYIDTTPLGRILNRFTKDTDSLDNELTESLRLMTSQFANIV-GVCVMCIVYLPWFAIAIPFLLVIFVLIADHYQSSGREIKRLEAVQRSFVYNNLNEVLGGMDTIKAYRSQERFLAK 1096          
The following BLAST results are available for this feature:
BLAST of EY665055 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 104
Match NameE-valueIdentityDescription
CFTR_SQUAC8.010e-1326.88Cystic fibrosis transmembrane conductance regulato... [more]
CFTR_SHEEP8.010e-1327.71Cystic fibrosis transmembrane conductance regulato... [more]
ABCC9_DICDI8.010e-1328.28ABC transporter C family member 9 OS=Dictyostelium... [more]
CFTR_XENLA1.046e-1228.13Cystic fibrosis transmembrane conductance regulato... [more]
CFTR_DASNO1.046e-1226.51Cystic fibrosis transmembrane conductance regulato... [more]
CFTR_RABIT1.366e-1228.48Cystic fibrosis transmembrane conductance regulato... [more]
ABCC2_DICDI1.366e-1230.26ABC transporter C family member 2 OS=Dictyostelium... [more]
CFTR_MUSPF1.784e-1228.31Cystic fibrosis transmembrane conductance regulato... [more]
CFTR_PIG2.331e-1227.71Cystic fibrosis transmembrane conductance regulato... [more]
YOR1_YEAST5.192e-1225.81Oligomycin resistance ATP-dependent permease YOR1 ... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-073-E05-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY665055 ID=EY665055; Name=EY665055; organism=Citrus sinensis; type=EST; length=903bp
AGCCAGCCTCTCTCACCTTACATTTGTGATTGGTCAGATATTGCAGAACT
CTTGGCTGGCTGCCAATGTAGAAAATCCTAATGTCAGCACATTACGGCTG
ATAGTGGTTTACTTGTTGATTGGATTTGTCTCAACACTATTCCTGATGTC
TAGATCTCTCTCTAGTGTTGTTTTAGGTATTAGATCATCAAAATCTTTGT
TCTCACAGCTTTTAAATTCCCTTTTCCGTGCACCTATGTCTTTTTACGAC
TCCACACCTCTTGGAAGGGTACTTAGTCGGGTTTCTTCTGATCTGAGTAT
TGTCGACCTAGATGTTCCATTCAGTTTAATCTTTGCTGTCGGGGCTACCA
CAAATGCTTATAGTAATCTAGGAGTACTTGCTGTTGTCACATGGCAAGTC
CTATTCGTTTCCATACCAGTGATTTTCTTGGCAATTCGCTTGCAGAGATA
CTATTTTGCTACTGCAAAAGAATTGATGCGGCTTAACGGCACAACCAAGT
CCTTGGTAGCAAATCATCTAGCTGAGTCTATAGCAGGAGCCATGACAATT
ANGGCTTTTGAGGANGAAGATCNGTTTTTTTGCAAAGAACCTTGACCTCA
TTGATACCAATGCCAGTCCTTTCTTCCAAACTTTTGCAGCAAATGAGTGG
GNTGATCCAACGCCCTAGAACACTCAGTGCAACNNTGTATATCCTCGCAG
CATTCTGTATGGTTTTGCTTNCTNCTGNAACTTTTACCCCTGNATTNATT
NGAATGGCCCTTTCTTATGGTCTTCGTTAAACAGTCCCTAGTATGTCAAT
CCAAAACAGTGTACTCTANCAATTATATCATTCTGTAAAAGACTTTACCA
TACTGCATGTACCAGTGAAGCCCTGAGTAGTAGAAACAACCGCCCCACCA
CTG
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