EY665051

Overview
NameEY665051
Unique NameEY665051
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length913
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY665051 vs. ExPASy Swiss-Prot
Match: ACSL1_CAVPO (Long-chain-fatty-acid--CoA ligase 1 OS=Cavia porcellus GN=ACSL1 PE=2 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 6.900e-26
Identity = 57/165 (34.55%), Postives = 111/165 (67.27%), Query Frame = 3
Query:  111 NDICTIMYTSGTTGDPKGVMVSNENIVTFIAG-VKCLLESVNEKLTSEDVYVSYLPLAHIFDRAIEEVFISNGAAIGFWRGDVKLLLEDIGELKPTIFCAVPRVLDRIYSGLNQKISSGGLLKKTLFNIAYSYKFHNLKNGHIHVEASPIADIIVFDMVKQSFGG 602
            +D+  I +TSGTTG+PKG M++++N+V+  +  VK   +++   L + D+++S+LPLAH++++ ++ V + +GA IGF++GD++LL++D+  L+PTIF  VPR+L+R++  +  + ++   +K+ L + A   K   L++G I    + + D ++F  ++ S GG
Sbjct:  268 DDLAVICFTSGTTGNPKGAMITHKNVVSDCSAFVKATEKAL--VLNASDIHISFLPLAHMYEQLLQCVMLCHGAKIGFFQGDIRLLMDDLKALQPTIFPVVPRLLNRMFDRIFAQANT--TVKRWLLDFASKRKEAELRSGII--RNNSVWDKLIFHKIQSSLGG 426          

HSP 2 Score: 28.4906 bits (62), Expect = 6.900e-26
Identity = 14/29 (48.28%), Postives = 20/29 (68.97%), Query Frame = 1
Query:  595 LVGRVRLILSGAAPLTXHVETFLAGGGMC 681
            L G+VRL+++GAAP++  V TFL     C
Sbjct:  424 LGGKVRLMVTGAAPVSATVLTFLRAALGC 452          
BLAST of EY665051 vs. ExPASy Swiss-Prot
Match: ACSL4_HUMAN (Long-chain-fatty-acid--CoA ligase 4 OS=Homo sapiens GN=ACSL4 PE=1 SV=2)

HSP 1 Score: 105.916 bits (263), Expect = 1.555e-25
Identity = 67/202 (33.17%), Postives = 103/202 (50.99%), Query Frame = 3
Query:   42 VYSWDEFLQLGENKQ-FDLPVKKK--NDICTIMYTSGTTGDPKGVMVSNENIVTFIAGVKCLLESVNEKLTSEDVYVSYLPLAHIFDRAIEEVFISNGAAIGFWRGDVKLLLEDIGE------------LKPTIFCAVPRVLDRIYSGLNQKISSGGLLKKTLFNIAYSYKFHNLKNGHIHVEASPIADIIVFDMVKQSFGG 602
            ++S     +LG N +   +P  +   +D+  +MYTSG+TG PKGVM+ + N+   IAG+    E +   L  +D Y+ YLPLAH+ +   E    + G  IG+      L L D               LKPT+  AVP ++DRIY  +  K+     ++KTLF I Y YK   +K G+     +P+ ++++F  VK   GG
Sbjct:  244 IHSMQSVEELGSNPENLGIPPSRPTPSDMAIVMYTSGSTGRPKGVMMHHSNL---IAGMTGQCERI-PGLGPKDTYIGYLPLAHVLELTAEISCFTYGCRIGY---SSPLTLSDQSSKIKKGSKGDCTVLKPTLMAAVPEIMDRIYKNVMSKVQEMNYIQKTLFKIGYDYKLEQIKKGY----DAPLCNLLLFKKVKALLGG 434          

HSP 2 Score: 27.7202 bits (60), Expect = 1.555e-25
Identity = 13/31 (41.94%), Postives = 18/31 (58.06%), Query Frame = 1
Query:  595 LVGRVRLILSGAAPLTXHVETFLAGGGMCLC 687
            L G VR++LSG APL+     F+    +C C
Sbjct:  432 LGGNVRMMLSGGAPLSPQTHRFM---NVCFC 459          

HSP 3 Score: 24.2534 bits (51), Expect = 1.555e-25
Identity = 9/17 (52.94%), Postives = 12/17 (70.59%), Query Frame = 2
Query:  668 VVACAYVLEGYGLTENC 718
            V  C  + +GYGLTE+C
Sbjct:  456 VCFCCPIGQGYGLTESC 472          
BLAST of EY665051 vs. ExPASy Swiss-Prot
Match: ACSL4_RAT (Long-chain-fatty-acid--CoA ligase 4 OS=Rattus norvegicus GN=Acsl4 PE=2 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 1.558e-25
Identity = 67/202 (33.17%), Postives = 100/202 (49.50%), Query Frame = 3
Query:   33 VSAVYSWDEFLQLGENKQFDLPVKKKNDICTIMYTSGTTGDPKGVMVSNENIVTFIAGVKCLLESVNEKLTSEDVYVSYLPLAHIFDRAIEEVFISNGAAIGFWRGDVKLLLEDIGE------------LKPTIFCAVPRVLDRIYSGLNQKISSGGLLKKTLFNIAYSYKFHNLKNGHIHVEASPIADIIVFDMVKQSFGG 602
            + ++ S +E     EN          +D+  +MYTSG+TG PKGVM+ + N+   IAG+    E +   L  +D Y+ YLPLAH+ +   E    + G  IG+      L L D               LKPT+  AVP ++DRIY  +  K+     ++KTLF I Y YK   +K G+     +P+ ++I+F  VK   GG
Sbjct:  203 IHSMQSVEELGSKPENSSIPPSRPTPSDMAIVMYTSGSTGRPKGVMMHHSNL---IAGMTGQCERI-PGLGPKDTYIGYLPLAHVLELTAEISCFTYGCRIGY---SSPLTLSDQSSKIKKGSKGDCTVLKPTLMAAVPEIMDRIYKNVMSKVQEMNYIQKTLFKIGYDYKLEQIKKGY----DAPLCNLILFKKVKALLGG 393          

HSP 2 Score: 27.7202 bits (60), Expect = 1.558e-25
Identity = 13/31 (41.94%), Postives = 18/31 (58.06%), Query Frame = 1
Query:  595 LVGRVRLILSGAAPLTXHVETFLAGGGMCLC 687
            L G VR++LSG APL+     F+    +C C
Sbjct:  391 LGGNVRMMLSGGAPLSPQTHRFM---NVCFC 418          

HSP 3 Score: 24.2534 bits (51), Expect = 1.558e-25
Identity = 9/17 (52.94%), Postives = 12/17 (70.59%), Query Frame = 2
Query:  668 VVACAYVLEGYGLTENC 718
            V  C  + +GYGLTE+C
Sbjct:  415 VCFCCPIGQGYGLTESC 431          
BLAST of EY665051 vs. ExPASy Swiss-Prot
Match: ACSL3_RAT (Long-chain-fatty-acid--CoA ligase 3 OS=Rattus norvegicus GN=Acsl3 PE=1 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 4.162e-25
Identity = 65/173 (37.57%), Postives = 96/173 (55.49%), Query Frame = 3
Query:  111 NDICTIMYTSGTTGDPKGVMVSNENIVTFIAGVKCLLESVNEKLTSEDVYVSYLPLAHIFDRAIEEVFISNGAAIGFWRGDV---------KLLLEDIGELKPTIFCAVPRVLDRIYSGLNQKISSGGLLKKTLFNIAYSYKFHNLKNGHIHVEASPIADIIVFDMVKQSFGG 602
            +DI  IMYTSG+TG PKGVM+S+ NI+  I G+   +  + E    EDVY+ YLPLAH+ + + E V +S+G  IG+              K    D   LKPT+  AVP ++DRIY  +  K++     ++ LF +AY+YK   +  G     ++P+ D  VF  V++  GG
Sbjct:  279 SDIAVIMYTSGSTGIPKGVMISHSNIIASITGMARRIPRLGE----EDVYIGYLPLAHVLELSAELVCLSHGCRIGYSSPQTLADQSSKIKKGSKGDTSVLKPTLMAAVPEIMDRIYKNVMNKVNEMSAFQRNLFILAYNYKMEQISKGC----STPLCDRFVFRNVRRLLGG 443          
BLAST of EY665051 vs. ExPASy Swiss-Prot
Match: ACSL1_MOUSE (Long-chain-fatty-acid--CoA ligase 1 OS=Mus musculus GN=Acsl1 PE=1 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 1.581e-24
Identity = 69/212 (32.55%), Postives = 117/212 (55.19%), Query Frame = 3
Query:  114 DICTIMYTSGTTGDPKGVMVSNENIVTFIAGVKCLLESVNEKLTSEDVYVSYLPLAHIFDRAIEEVFISNGAAIGFWRGDVKLLLEDIGELKPTIFCAVPRVLDRIYSGLNQKISSGGLLKKTLFNIAYSYKFHNLKNGHIHVEASPIADIIVFDMVKQSFGG------------------------ACTAYSVWSSTPYXS--CRNLPGGW 671
            D+  I +TSGTTG+PKG M++++NI+   +G     ES     T +DV +S+LPLAH+F+  +E V + +GA IGF++GD++LL++D+  L+PTIF  VPR+L+R++  +  + ++   LK+ L + A   K  ++++G   V  + + D ++F  ++ S GG                         C  Y  +  T   +  C +LPG W
Sbjct:  270 DLAIICFTSGTTGNPKGAMITHQNIINDCSGFIKATESAFIAST-DDVLISFLPLAHMFETVVECVMLCHGAKIGFFQGDIRLLMDDLKVLQPTIFPVVPRLLNRMFDRIFGQANTS--LKRWLLDFASKRKEADVRSG--IVRNNSLWDKLIFHKIQSSLGGKVRLMITGAAPVSATVLTFLRTALGCQFYEGYGQTECTAGCCLSLPGDW 476          
BLAST of EY665051 vs. ExPASy Swiss-Prot
Match: ACSL6_RAT (Long-chain-fatty-acid--CoA ligase 6 OS=Rattus norvegicus GN=Acsl6 PE=1 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 2.697e-24
Identity = 64/176 (36.36%), Postives = 107/176 (60.80%), Query Frame = 3
Query:   75 ENKQFDLPVKKKNDICTIMYTSGTTGDPKGVMVSNENIVTFIAGVKCLLESVNEKLTSEDVYVSYLPLAHIFDRAIEEVFISNGAAIGFWRGDVKLLLEDIGELKPTIFCAVPRVLDRIYSGLNQKISSGGLLKKTLFNIAYSYKFHNLKNGHIHVEASPIADIIVFDMVKQSFGG 602
            EN +  +P  + +D+  + +TSGTTG+PKG M+++ N+V   +G   + ES     T  DV+ SYLPLAH+F+R ++ V   +G  +GF++GD++LL +D+  L+PTIF  VPR+L+R+Y  +  +  +   LK+ L   A   K   +++G I    + I D + F+ ++ S GG
Sbjct:  257 ENHRVPVP-PRPDDLSIVCFTSGTTGNPKGAMLTHGNVVADFSGFLKVTES-QWAPTCADVHFSYLPLAHMFERMVQSVVYCHGGRVGFFQGDIRLLSDDMKALRPTIFPVVPRLLNRMYDKIFHQADTS--LKRWLLEFAAKRKQAEVRSGII--RNNSIWDELFFNKIQASLGG 426          
BLAST of EY665051 vs. ExPASy Swiss-Prot
Match: ACSL1_RAT (Long-chain-fatty-acid--CoA ligase 1 OS=Rattus norvegicus GN=Acsl1 PE=1 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 2.697e-24
Identity = 70/212 (33.02%), Postives = 116/212 (54.72%), Query Frame = 3
Query:  114 DICTIMYTSGTTGDPKGVMVSNENIVTFIAGVKCLLESVNEKLTSEDVYVSYLPLAHIFDRAIEEVFISNGAAIGFWRGDVKLLLEDIGELKPTIFCAVPRVLDRIYSGLNQKISSGGLLKKTLFNIAYSYKFHNLKNGHIHVEASPIADIIVFDMVKQSFGG------------------------ACTAYSVWSSTPYXS--CRNLPGGW 671
            D+  I +TSGTTG+PKG MV+++NI+   +G     ES     + EDV +S+LPLAH+F+  +E V + +GA IGF++GD++LL++D+  L+PTIF  VPR+L+R++  +  + ++   +K+ L + A   K   L++G   V  + + D ++F  ++ S GG                         C  Y  +  T   +  C +LPG W
Sbjct:  270 DLAIICFTSGTTGNPKGAMVTHQNIMNDCSGFIKATESAFIA-SPEDVLISFLPLAHMFETVVECVMLCHGAKIGFFQGDIRLLMDDLKVLQPTIFPVVPRLLNRMFDRIFGQANTS--VKRWLLDFASKRKEAELRSG--IVRNNSLWDKLIFHKIQSSLGGKVRLMITGAAPVSATVLTFLRAALGCQFYEGYGQTECTAGCCLSLPGDW 476          
BLAST of EY665051 vs. ExPASy Swiss-Prot
Match: ACSL6_HUMAN (Long-chain-fatty-acid--CoA ligase 6 OS=Homo sapiens GN=ACSL6 PE=2 SV=4)

HSP 1 Score: 112.079 bits (279), Expect = 4.601e-24
Identity = 67/188 (35.64%), Postives = 112/188 (59.57%), Query Frame = 3
Query:   75 ENKQFDLPVKKKNDICTIMYTSGTTGDPKGVMVSNENIVTFIAGVKCLLESVNEKLTSEDVYVSYLPLAHIFDRAIEEVFISNGAAIGFWRGDVKLLLEDIGELKPTIFCAVPRVLDRIYSGLNQKISSGGLLKKTLFNIAYSYKFHNLKNGHIHVEASPIADIIVFDMVKQSFGGACTAYSVWSSTP 638
            EN Q  +P  + +D+  + +TSGTTG+PKG M+++ N+V   +G   + E V      +DV +S+LPLAH+F+R I+ V   +G  +GF++GD++LL +D+  L PTIF  VPR+L+R+Y  +  + ++   LK+ L   A   K   +++G I  ++  I D + F+ ++ S GG C    V  + P
Sbjct:  257 ENHQAPVP-PQPDDLSIVCFTSGTTGNPKGAMLTHGNVVADFSGFLKVTEKVIFP-RQDDVLISFLPLAHMFERVIQSVVYCHGGRVGFFQGDIRLLSDDMKALCPTIFPVVPRLLNRMYDKIFSQANTP--LKRWLLEFAAKRKQAEVRSGIIRNDS--IWDELFFNKIQASLGG-CVRMIVTGAAP 437          
BLAST of EY665051 vs. ExPASy Swiss-Prot
Match: ACSL6_MOUSE (Long-chain-fatty-acid--CoA ligase 6 OS=Mus musculus GN=Acsl6 PE=2 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 1.025e-23
Identity = 63/176 (35.80%), Postives = 106/176 (60.23%), Query Frame = 3
Query:   75 ENKQFDLPVKKKNDICTIMYTSGTTGDPKGVMVSNENIVTFIAGVKCLLESVNEKLTSEDVYVSYLPLAHIFDRAIEEVFISNGAAIGFWRGDVKLLLEDIGELKPTIFCAVPRVLDRIYSGLNQKISSGGLLKKTLFNIAYSYKFHNLKNGHIHVEASPIADIIVFDMVKQSFGG 602
            EN    +P  + +D+  + +TSGTTG+PKG M+++ N+V   +G   + E V      +DV +S+LPLAH+F+R I+ V   +G  +GF++GD++LL +D+  L+PTIF  VPR+L+R+Y  +  +  +   LK+ L   A   K   +++G I    + I D + F+ ++ S GG
Sbjct:  257 ENHHAPVP-PRPDDLSIVCFTSGTTGNPKGAMLTHGNVVADFSGFLKVTEKVIFP-RQDDVLISFLPLAHMFERVIQSVVYCHGGRVGFFQGDIRLLSDDMKALRPTIFPVVPRLLNRMYDKIFHQADTS--LKRWLLEFAAKRKQAEVRSGII--RNNSIWDELFFNKIQASLGG 426          
BLAST of EY665051 vs. ExPASy Swiss-Prot
Match: ACSL4_MOUSE (Long-chain-fatty-acid--CoA ligase 4 OS=Mus musculus GN=Acsl4 PE=2 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 1.862e-22
Identity = 62/176 (35.23%), Postives = 92/176 (52.27%), Query Frame = 3
Query:  111 NDICTIMYTSGTTGDPKGVMVSNENIVTFIAGVKCLLESVNEKLTSEDVYVSYLPLAHIFDRAIEEVFISNGAAIGFWRGDVKLLLEDIGE------------LKPTIFCAVPRVLDRIYSGLNQKISSGGLLKKTLFNIAYSYKFHNLKNGHIHVEASPIADIIVFDMVKQSFGG 602
            +D+  +MYTSG+TG PKG+M+ + N+   IAG+    E +   L  +D Y+ YLPLAH+ +   E    + G  IG+      L L D               LKPT+  AVP ++DRIY  +  K+     ++KTLF I Y YK   +K G+     +P+ ++I+F  VK   GG
Sbjct:  270 SDMAIVMYTSGSTGRPKGLMMHHTNL---IAGMTGQCERI-PGLGPKDTYIGYLPLAHVLELTAEISCFTYGCRIGY---SSPLTLSDQSSKIKKGSKGDCTVLKPTLMAAVPEIMDRIYKNVMSKVQEMNYVQKTLFKIGYDYKLEQIKKGY----DAPLCNLILFKKVKDLVGG 434          

HSP 2 Score: 24.6386 bits (52), Expect = 1.862e-22
Identity = 9/17 (52.94%), Postives = 12/17 (70.59%), Query Frame = 2
Query:  668 VVACAYVLEGYGLTENC 718
            V  C  + +GYGLTE+C
Sbjct:  456 VCLCCPIGQGYGLTESC 472          
The following BLAST results are available for this feature:
BLAST of EY665051 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 38
Match NameE-valueIdentityDescription
ACSL1_CAVPO6.900e-2634.55Long-chain-fatty-acid--CoA ligase 1 OS=Cavia porce... [more]
ACSL4_HUMAN1.555e-2533.17Long-chain-fatty-acid--CoA ligase 4 OS=Homo sapien... [more]
ACSL4_RAT1.558e-2533.17Long-chain-fatty-acid--CoA ligase 4 OS=Rattus norv... [more]
ACSL3_RAT4.162e-2537.57Long-chain-fatty-acid--CoA ligase 3 OS=Rattus norv... [more]
ACSL1_MOUSE1.581e-2432.55Long-chain-fatty-acid--CoA ligase 1 OS=Mus musculu... [more]
ACSL6_RAT2.697e-2436.36Long-chain-fatty-acid--CoA ligase 6 OS=Rattus norv... [more]
ACSL1_RAT2.697e-2433.02Long-chain-fatty-acid--CoA ligase 1 OS=Rattus norv... [more]
ACSL6_HUMAN4.601e-2435.64Long-chain-fatty-acid--CoA ligase 6 OS=Homo sapien... [more]
ACSL6_MOUSE1.025e-2335.80Long-chain-fatty-acid--CoA ligase 6 OS=Mus musculu... [more]
ACSL4_MOUSE1.862e-2235.23Long-chain-fatty-acid--CoA ligase 4 OS=Mus musculu... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-073-E01-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY665051 ID=EY665051; Name=EY665051; organism=Citrus sinensis; type=EST; length=913bp
ACCTGAGCATAGGGAAGAGATTGAGAAGTATGGTTTCGGCTGTATATTCG
TGGGACGAATTTTTGCAACTGGGAGAGAATAAACAATTTGATCTACCTGT
GAAAAAGAAAAATGACATCTGTACAATTATGTATACTAGTGGAACAACTG
GTGATCCAAAGGGAGTGATGGTTTCAAATGAGAACATTGTTACTTTTATA
GCTGGAGTGAAATGCCTTTTGGAGAGTGTGAATGAGAAGTTAACTTCGGA
GGATGTATATGTTTCTTATCTTCCTCTTGCGCATATTTTTGACCGGGCAA
TTGAGGAAGTTTTCATATCCAATGGTGCTGCTATAGGGTTCTGGCGTGGG
GATGTCAAATTATTGCTTGAAGACATCGGAGAGCTCAAACCAACTATTTT
CTGTGCTGTTCCTCGTGTACTAGACAGAATATACTCGGGTTTGAATCAGA
AGATTTCTTCAGGCGGCTTATTAAAAAAGACATTATTTAATATTGCATAC
TCATATAAATTCCATAACTTGAAGAATGGGCATATACATGTCGAGGCATC
CCCTATTGCTGACATAATAGTATTTGACATGGTAAAGCAATCATTTGGTG
GGGCGTGTACGGCTTATTCTGTCTGGAGCAGCACCCCTTACTNCTCATGT
AGAAACCTTCCTGGCGGGTGGTGGCATGTGCTTATGTCCTGGAGGGATAT
GGTCTGACTGAAAACTGTGCCCGGGACTTTTGTGTCACTGCCAAATGANA
TGGCAATGATTGGGAACTGGGGGGCCTCCAGTACCAAATGGGGGATGGAT
GGCTAGAATCTGTTCCTGAAAGGGGATATGATGCCCTCTCAAGTACACAC
GTGGGAAAATTTTGGGTGAAGGGGGATTACTGTGTTTTCAGGTACTTTAA
ACGTGAGACCTAC
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