EY665043

Overview
NameEY665043
Unique NameEY665043
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length891
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY665043 vs. ExPASy Swiss-Prot
Match: PURQ_METM5 (Phosphoribosylformylglycinamidine synthase 1 OS=Methanococcus maripaludis (strain C5 / ATCC BAA-1333) GN=purQ PE=3 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.579e-13
Identity = 50/153 (32.68%), Postives = 70/153 (45.75%), Query Frame = 2
Query:  107 LGVCNGCQLMALLGWIXXXXXXXXXXXXXDPSQPRFVHNESGRFECRFSSVTIEDSPAIMLKGMEGSTLGVWAAHGEGRAYFPDDGVLDRILHSHLAPVRYCDDDGNPT-EVYPFNVNGSPLXVAAICSPDGRHLAMMPHPERCFLMWQYPWY 562
            LG+CNG Q+M  LG                 +      N + R+ECR+  V   DS  +  KG+  + + +  AHGEGR Y  D+     +  +      YCD +GN   + YP N NG+   +A IC   GR + +MPHPER       P Y
Sbjct:   92 LGICNGFQVMTNLGLFALPSTDYGERISALEA------NTNNRYECRWVHVKENDSICVFTKGITITHVPI--AHGEGRFYC-DEKTYFELKENKQIVFSYCDSEGNSANQEYPLNPNGAYYDIAGICDKTGRIMGLMPHPERSLYSISEPEY 235          
BLAST of EY665043 vs. ExPASy Swiss-Prot
Match: PURQ_THEVO (Phosphoribosylformylglycinamidine synthase 1 OS=Thermoplasma volcanium GN=purQ PE=3 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 3.517e-13
Identity = 46/149 (30.87%), Postives = 75/149 (50.34%), Query Frame = 2
Query:  107 LGVCNGCQLMALLGWIXXXXXXXXXXXXXDPSQPRFVHNESGRFECRFSSVTIEDSPAIMLKGMEGS-TLGVWAAHGEGRAYFPDDGVLDRILHSHLAPVRYCDDDGNPTEVYPFNVNGSPLXVAAICSPDGRHLAMMPHPERCFLMWQ 550
            +G+CNG Q++  +G I             D S+    +NES RFECR++ + +     I   G  G     V  AH EGR    +  VL ++  +     +Y +++ + T+ YP+N NGS   VA++ +  G  + +MPHPER +  +Q
Sbjct:   94 IGICNGFQVLMEMGLIY------------DRSKITLTNNESNRFECRYTYMKMTSRNRIFQSGFYGKGVFQVPVAHAEGRIAVSERSVLKKLYENDQVVFKYSNEN-DVTDEYPWNPNGSIDSVASLSNEAGNVIGLMPHPERIYYRYQ 229          
BLAST of EY665043 vs. ExPASy Swiss-Prot
Match: PURQ_METTP (Phosphoribosylformylglycinamidine synthase 1 OS=Methanosaeta thermophila (strain DSM 6194 / PT) GN=purQ PE=3 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 6.000e-13
Identity = 35/85 (41.18%), Postives = 44/85 (51.76%), Query Frame = 2
Query:  302 GSTLGVWAAHGEGRAYFPDDGVLDRILHSHLAPVRYCDDDGNPTEVYPFNVNGSPLXVAAICSPDGRHLAMMPHPERCFLMWQYP 556
            G  L +  AH EG     D  V++R++       RYC   G     +P NVNGS   +A I +P+G  L MMPHPER F  WQ P
Sbjct:  150 GEILSIPIAHAEGNLVASDRKVIERLIEDDQIVFRYCSPQGEIINEFPVNVNGSTENIAGISNPEGNVLGMMPHPERAFFAWQLP 234          
BLAST of EY665043 vs. ExPASy Swiss-Prot
Match: PURQ_TREDE (Phosphoribosylformylglycinamidine synthase 1 OS=Treponema denticola GN=purQ PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 1.023e-12
Identity = 47/148 (31.76%), Postives = 69/148 (46.62%), Query Frame = 2
Query:  107 LGVCNGCQLMALLGWIXXXXXXXXXXXXXDPSQPR---FVHNESGRFECRFSSVTIEDSPAIMLKGMEGSTLGVWAAHGEGRAYFPDDGVLDRILHSHLAPVRYCDDDGNPT----EVYPFNVNGSPLXVAAICSPDGRHLAMMPHPE 529
            +G+CNG Q++   G +             D  + R     +N+ GRFECRF+++  + S  I  K ++G+ +    AHGEGR        LD +       + Y   D   +      YPFN NGS   +A IC+  G  L +MPHPE
Sbjct:   92 IGICNGFQVLVKSGILPGKEKDGKVILDKDGYKNRQATLTYNKQGRFECRFTTMIPQKSNCIWTKDLKGN-IHCPIAHGEGRFLTDSQKTLDDLFEKGQIALVYGGKDAEKSIPANGEYPFNPNGSLADIAGICNTKGNVLGLMPHPE 238          
BLAST of EY665043 vs. ExPASy Swiss-Prot
Match: PURQ_DEHE1 (Phosphoribosylformylglycinamidine synthase 1 OS=Dehalococcoides ethenogenes (strain 195) GN=purQ PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 5.079e-12
Identity = 52/177 (29.38%), Postives = 82/177 (46.33%), Query Frame = 2
Query:  107 LGVCNGCQLMALLGWIXXXXXXXXXXXXXDPSQPRFVHNESGRFECRFSSVTIED-SPAIMLKGMEGSTLGVWAAHGEGRAYFPDDGVLDRILHSHLAPVRYCDDDGNPTEVYPFNVNGSPLXVAAICSPDGRHLAMMPHPERCFLMWQYPWYPKNWNVXQKGPSPWVKDVQNAREW 634
            +G+CNG Q +   G +             D  +     N SGRFECR++ + +   S  +  +G++   L V  AHGEG+     +     +++   + V Y D DG     YP N  G+ + +A I    GR  A+MPHPER     Q+P +P    + ++G    +K   NA +W
Sbjct:   93 IGICNGFQALVKTGILPGPMK--------DGQKITLTENNSGRFECRWTYLAVNPFSTCVFTQGIDRLYLPV--AHGEGKLLGSPE-----VINKLNSVVYYTDKDGKRNSPYPANPAGTLMDIAGIADESGRIFALMPHPERFVRGSQHPRWPAE-GLKEEGDG--LKIFTNAVKW 251          
BLAST of EY665043 vs. ExPASy Swiss-Prot
Match: MTP_EBVG (Major tegument protein OS=Epstein-Barr virus (strain GD1) GN=BNRF1 PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 7.334e-11
Identity = 58/209 (27.75%), Postives = 93/209 (44.50%), Query Frame = 2
Query:   35 ASIRFNQPLLNQFQEFYKRPDTFSLGVCN-GCQLMALLGWIXXXXXXXXXXXXXDPSQPRFV--HNESGRFECRFSSVTIE-DSPAIMLKGMEGSTLGVWAAHGEGRAYFPDDGVLDRILHSHLAPVRYCDDDGNPTEVYPFNVN--GSPLX---VAAICSPDGRHLAMMPHPERCFLMWQYPWYPKNWNVXQKGPSPWVKDVQNAREW 634
            A I  +  L +   +F  RPDTFS+ +   G Q++A LG +             +  +   +   N SG FE R+ +++I   + ++ML+G+ G  L  W         F + G+   + ++H      C    N T+ + F +N   +P     +A +CS DGRHLA++  P  C   WQ+   P  +     G SPW    Q A  W
Sbjct: 1105 ALINRSPALRDAILKFLNRPDTFSVALGELGVQVLAGLGAVGSTDNPPAPGVEVNVQRSPLILAPNASGMFESRWLNISIPATTSSVMLRGLRGCVLPCWVQGSCLGLQFTNLGMPYVLQNAHQIA---CHFHSNGTDAWRFAMNYPRNPTEQGNIAGLCSRDGRHLALLCDPSLCTDFWQWEHIPPAFG-HPTGCSPWTLMFQAAHLW 1309          
BLAST of EY665043 vs. ExPASy Swiss-Prot
Match: MTP_EBVA8 (Major tegument protein OS=Epstein-Barr virus (strain AG876) GN=BNRF1 PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 7.334e-11
Identity = 58/209 (27.75%), Postives = 93/209 (44.50%), Query Frame = 2
Query:   35 ASIRFNQPLLNQFQEFYKRPDTFSLGVCN-GCQLMALLGWIXXXXXXXXXXXXXDPSQPRFV--HNESGRFECRFSSVTIE-DSPAIMLKGMEGSTLGVWAAHGEGRAYFPDDGVLDRILHSHLAPVRYCDDDGNPTEVYPFNVN--GSPLX---VAAICSPDGRHLAMMPHPERCFLMWQYPWYPKNWNVXQKGPSPWVKDVQNAREW 634
            A I  +  L +   +F  RPDTFS+ +   G Q++A LG +             +  +   +   N SG FE R+ +++I   + ++ML+G+ G  L  W         F + G+   + ++H      C    N T+ + F +N   +P     +A +CS DGRHLA++  P  C   WQ+   P  +     G SPW    Q A  W
Sbjct: 1105 ALINRSPALRDAILKFLNRPDTFSVALGELGVQVLAGLGAVGSTDNPPAPGVEVNVQRSPLILAPNASGMFESRWLNISIPATTSSVMLRGLRGCVLPCWVQGSCLGLQFTNLGMPYVLQNAHQIA---CHFHSNGTDAWRFAMNYPRNPTEQGNIAGLCSRDGRHLALLCDPSLCTDFWQWEHIPPAFG-HPTGCSPWTLMFQAAHLW 1309          
The following BLAST results are available for this feature:
BLAST of EY665043 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 77
Match NameE-valueIdentityDescription
PURQ_METM51.579e-1332.68Phosphoribosylformylglycinamidine synthase 1 OS=Me... [more]
PURQ_THEVO3.517e-1330.87Phosphoribosylformylglycinamidine synthase 1 OS=Th... [more]
PURQ_METTP6.000e-1341.18Phosphoribosylformylglycinamidine synthase 1 OS=Me... [more]
PURQ_TREDE1.023e-1231.76Phosphoribosylformylglycinamidine synthase 1 OS=Tr... [more]
PURQ_DEHE15.079e-1229.38Phosphoribosylformylglycinamidine synthase 1 OS=De... [more]
MTP_EBVG7.334e-1127.75Major tegument protein OS=Epstein-Barr virus (stra... [more]
MTP_EBVA87.334e-1127.75Major tegument protein OS=Epstein-Barr virus (stra... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C1-101-073-D05-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY665043 ID=EY665043; Name=EY665043; organism=Citrus sinensis; type=EST; length=891bp
ATGCTGATGTTCTTGATTCTGCAAAAGTTGGTCTGCTTCCATACGGTTCA
ATCAACCTCTTCTAAACCAATTTCAGGAGTTTTACAAGCGTCCAGACACA
TTCAGTCTTGGTGTTTGCAATGGGTGTCAGCTTATGGCTCTATTGGGGTG
GATCCCAGGGCCTCAAGTCGGGGGTGTGCATGGCGCTGGTGGGGACCCAT
CACAGCCAAGGTTTGTTCACAATGAGTCAGGTCGGTTTGAATGCCGCTTC
TCGAGTGTAACAATAGAGGACTCACCTGCTATAATGTTGAAAGGAATGGA
AGGCAGCACATTAGGTGTCTGGGCTGCCCATGGTGAGGGTAGAGCGTATT
TCCCTGATGATGGTGTTCTTGATCGTATCCTTCATTCACATTTGGCTCCA
GTAAGATATTGTGATGATGATGGAAATCCTACAGAAGTTTACCCTTTTAA
TGTGAATGGCTCTCCCTTANGAGTGGCAGCAATTTGTTCACCCGATGGAA
GACATCTTGCTATGATGCCTCATCCAGAGCGTTGCTTCTTAATGTGGCAG
TACCCGTGGTACCCCAAGAACTGGAATGTGGANCAAAAGGGCCCTAGCCC
ATGGGTTAAAGATGTCCAAAATGCCAGAGAATGGTGTTCTTGAGATGGGG
TAGTAACTCCCCTTTCCATTTTCCCTTCAGGAAGGTGCTGCCTCTAATGC
TCGCTGATCATTTCTGTGCTGATGTATGGTNATGTTGATGCCGGGAAACA
GGGCTCTGATTGCTACAAAAAAATCTGCAACATTTTGAGTGAGTTGTATT
TGCTTCTGATTTAGGCAATTTAAAAGACTNCGATGGGTAATTCCTTTGAT
AATTTATTGCAAGATTACGTCAACATACCTGAAATGGACTA
back to top