EY665021

Overview
NameEY665021
Unique NameEY665021
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length770
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig12632 contig Csv1_Contig12632:606..1374. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY665021 vs. ExPASy Swiss-Prot
Match: GCSP_SHELP (Glycine dehydrogenase [decarboxylating] OS=Shewanella loihica (strain ATCC BAA-1088 / PV-4) GN=gcvP PE=3 SV=1)

HSP 1 Score: 312.383 bits (799), Expect = 1.776e-84
Identity = 147/256 (57.42%), Postives = 190/256 (74.22%), Query Frame = 1
Query:   10 LGANHFHSLAASLAEEV---ETAIPSGLTRESPYLTHPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKGNINIEELMNAAEANMDNLSTLMVTYPSTHGVYERSIDEICKINSRYGGQVYMDGANMNAXGRLTSPG 768
            LG  H   +AA  A+ +     +IP+ L R+   L HP FN+YH+E E++RYI  L++K+L+L HSMI LGSCTMKLNA TEMMPV+WP F N+HPF P DQAQGY E+   L  WL  ITG+D+  +QPN+GA+GEYAGL+ I+ YH++RG+ HRNVC+IP SAHGTNPA+A + GMKIV    D +GN+++E+L   A    +NLS +MVTYPSTHGVYE +I EIC++  ++GGQVY+DGANMNA   LTSPG
Sbjct:  441 LGEGHGLDVAAIDADIIANGSNSIPAELVRQDAILEHPTFNRYHSETEMMRYIKRLENKDLALNHSMISLGSCTMKLNAATEMMPVSWPEFGNMHPFCPQDQAQGYAELIEELSNWLVDITGYDAMCMQPNSGASGEYAGLLAIKKYHESRGEGHRNVCLIPQSAHGTNPASAQLAGMKIVVTACDKQGNVDMEDLKAKAAEVAENLSCIMVTYPSTHGVYEETISEICEVIHQHGGQVYLDGANMNAQVGLTSPG 696          
BLAST of EY665021 vs. ExPASy Swiss-Prot
Match: GCSP_LEPIN (Glycine dehydrogenase [decarboxylating] OS=Leptospira interrogans GN=gcvP PE=3 SV=1)

HSP 1 Score: 311.997 bits (798), Expect = 2.320e-84
Identity = 145/233 (62.23%), Postives = 180/233 (77.25%), Query Frame = 1
Query:   70 IPSGLTRESPYLTHPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKGNINIEELMNAAEANMDNLSTLMVTYPSTHGVYERSIDEICKINSRYGGQVYMDGANMNAXGRLTSPG 768
            +P    R++ YLTHPVF  +HTE ++LRYI  L+S++LSL  SMIPLGSCTMKLNATTEM PVTWP F  IHPFAPADQ +GY+ +F  L +WLC ITGF   SLQPNAG+ GEYAGL+ IR YH++R + +RNVC+IP+SAHGTNPA+AAM G ++V V  D  GN+++E+L   AE +  +L+ LM+TYPSTHGV+E S+ EIC+I    GGQVYMDGANMNA   LTSPG
Sbjct:  468 VPDSFKRKTSYLTHPVFQSHHTETKMLRYIRKLESRDLSLTTSMIPLGSCTMKLNATTEMYPVTWPEFGAIHPFAPADQTKGYKIIFEQLEKWLCEITGFAGVSLQPNAGSQGEYAGLLAIRRYHESRNESYRNVCLIPISAHGTNPASAAMAGFQVVVVSCDPNGNVDLEDLKAKAEEHKKDLAALMITYPSTHGVFEESVKEICQIVHSCGGQVYMDGANMNAQVGLTSPG 700          
BLAST of EY665021 vs. ExPASy Swiss-Prot
Match: GCSP_LEPIC (Glycine dehydrogenase [decarboxylating] OS=Leptospira interrogans serogroup Icterohaemorrhagiae serovar copenhageni GN=gcvP PE=3 SV=1)

HSP 1 Score: 311.997 bits (798), Expect = 2.320e-84
Identity = 145/233 (62.23%), Postives = 180/233 (77.25%), Query Frame = 1
Query:   70 IPSGLTRESPYLTHPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKGNINIEELMNAAEANMDNLSTLMVTYPSTHGVYERSIDEICKINSRYGGQVYMDGANMNAXGRLTSPG 768
            +P    R++ YLTHPVF  +HTE ++LRYI  L+S++LSL  SMIPLGSCTMKLNATTEM PVTWP F  IHPFAPADQ +GY+ +F  L +WLC ITGF   SLQPNAG+ GEYAGL+ IR YH++R + +RNVC+IP+SAHGTNPA+AAM G ++V V  D  GN+++E+L   AE +  +L+ LM+TYPSTHGV+E S+ EIC+I    GGQVYMDGANMNA   LTSPG
Sbjct:  468 VPDSFKRKTSYLTHPVFQSHHTETKMLRYIRKLESRDLSLTTSMIPLGSCTMKLNATTEMYPVTWPEFGAIHPFAPADQTKGYKIIFEQLEKWLCEITGFAGVSLQPNAGSQGEYAGLLAIRRYHESRNESYRNVCLIPISAHGTNPASAAMAGFQVVVVSCDPNGNVDLEDLKAKAEEHKKDLAALMITYPSTHGVFEESVKEICQIVHSCGGQVYMDGANMNAQVGLTSPG 700          
BLAST of EY665021 vs. ExPASy Swiss-Prot
Match: GCSP_PSEU2 (Glycine dehydrogenase [decarboxylating] OS=Pseudomonas syringae pv. syringae (strain B728a) GN=gcvP PE=3 SV=1)

HSP 1 Score: 311.227 bits (796), Expect = 3.957e-84
Identity = 143/243 (58.85%), Postives = 188/243 (77.37%), Query Frame = 1
Query:   40 ASLAEEVETAIPSGLTRESPYLTHPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKGNINIEELMNAAEANMDNLSTLMVTYPSTHGVYERSIDEICKINSRYGGQVYMDGANMNAXGRLTSPG 768
            A+LA+ V++ +P+GL R+S  L+HPVFN+YH+E EL+RY+  L  K+L+L  +MIPLGSCTMKLNA +EM+PVTW  F N+HPFAPA+Q+ GYQ++ + L   LC  TG+D+ SLQPNAG+ GEYAGL+ IRAYH++RGD HR++C+IP SAHGTNPATA M GM++V    DA+GN++IE+L   A  + D L+ +M+TYPSTHGV+E  I EIC I    GGQVY+DGANMNA   L +PG
Sbjct:  451 AALADSVQSRLPAGLLRQSAILSHPVFNRYHSETELMRYLRKLADKDLALDRTMIPLGSCTMKLNAASEMIPVTWAEFGNLHPFAPAEQSAGYQQLTDELEAMLCAATGYDAISLQPNAGSQGEYAGLLAIRAYHQSRGDEHRDICLIPSSAHGTNPATANMAGMRVVVTACDARGNVDIEDLRAKAVQHRDQLAAIMITYPSTHGVFEEGIREICGIVHDNGGQVYIDGANMNAMVGLCAPG 693          
BLAST of EY665021 vs. ExPASy Swiss-Prot
Match: GCSP_ANAVT (Glycine dehydrogenase [decarboxylating] OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=gcvP PE=3 SV=1)

HSP 1 Score: 311.227 bits (796), Expect = 3.957e-84
Identity = 146/227 (64.32%), Postives = 175/227 (77.09%), Query Frame = 1
Query:   88 RESPYLTHPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKGNINIEELMNAAEANMDNLSTLMVTYPSTHGVYERSIDEICKINSRYGGQVYMDGANMNAXGRLTSPG 768
            R S YLTHPVFN+YH+E ELLRY+H L++K+LSL  SMIPLGSCTMKLNAT+EM+PVTW  F  IHPFAP  Q +GYQ +F  L  WL  ITGF   +LQPNAG+ GEY GL+VIR YH++RG+ HRNVC+IP SAHGTNPA+A MCGMK+V+V  DA GNI+I++L   AE +   L+ LMVTYPSTHGV+E  I EIC +   +GGQVYMDGANMNA   +  PG
Sbjct:  483 RSSSYLTHPVFNRYHSETELLRYLHRLETKDLSLTTSMIPLGSCTMKLNATSEMIPVTWEEFGRIHPFAPLTQTRGYQILFQQLEAWLAEITGFAGVALQPNAGSQGEYTGLLVIRQYHESRGETHRNVCLIPTSAHGTNPASAVMCGMKVVAVACDAGGNIDIDDLKAKAEKHSHELAALMVTYPSTHGVFEAGIQEICAVIHSHGGQVYMDGANMNAQVGICRPG 709          
BLAST of EY665021 vs. ExPASy Swiss-Prot
Match: GCSP_ANASP (Glycine dehydrogenase [decarboxylating] OS=Anabaena sp. (strain PCC 7120) GN=gcvP PE=3 SV=1)

HSP 1 Score: 311.227 bits (796), Expect = 3.957e-84
Identity = 147/228 (64.47%), Postives = 177/228 (77.63%), Query Frame = 1
Query:   85 TRESPYLTHPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKGNINIEELMNAAEANMDNLSTLMVTYPSTHGVYERSIDEICKINSRYGGQVYMDGANMNAXGRLTSPG 768
            +R+S YLTHPVFN+YH+E ELLRY+H L++K+LSL  SMIPLGSCTMKLNAT+EM+PVTW  F  IHPFAP  Q +GYQ +F  L  WL  ITGF   SLQPNAG+ GEY GL+VIR YH++RG+ HRNVC+IP SAHGTNPA+A MCGMK+V+V  DA GNI+I++L   AE +   L+ LMVTYPSTHGV+E  I EIC +   +GGQVYMDGANMNA   +  PG
Sbjct:  491 SRQSSYLTHPVFNRYHSETELLRYLHRLETKDLSLTTSMIPLGSCTMKLNATSEMIPVTWEEFGRIHPFAPLTQTRGYQILFQQLEAWLGEITGFAGVSLQPNAGSQGEYTGLLVIRQYHQSRGETHRNVCLIPNSAHGTNPASAVMCGMKVVAVACDAGGNIDIDDLKAKAEKHSHELAALMVTYPSTHGVFEAGIQEICAVIHSHGGQVYMDGANMNAQVGICRPG 718          
BLAST of EY665021 vs. ExPASy Swiss-Prot
Match: GCSP_SHEPA (Glycine dehydrogenase [decarboxylating] OS=Shewanella pealeana (strain ATCC 700345 / ANG-SQ1) GN=gcvP PE=3 SV=1)

HSP 1 Score: 310.842 bits (795), Expect = 5.169e-84
Identity = 145/246 (58.94%), Postives = 184/246 (74.80%), Query Frame = 1
Query:   31 SLAASLAEEVETAIPSGLTRESPYLTHPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKGNINIEELMNAAEANMDNLSTLMVTYPSTHGVYERSIDEICKINSRYGGQVYMDGANMNAXGRLTSPG 768
            +L A++     ++IPS L R+   LTHP FN+Y +E E++RYI  L++K+L+L HSMI LGSCTMKLNA TEM P+TWP F N+HPF P DQAQGY ++   L  WL  ITG+D+ SLQPN+GA GEYAGL+ I+ YH++RGD HRN+C+IP SAHGTNPA+A + GMKIV    D  GNI++ +L   A    DNLS +MVTYPSTHGVYE +I EIC++  ++GGQVY+DGANMNA   LTSPG
Sbjct:  451 ALDAAIIANGSSSIPSELVRKDAILTHPTFNRYQSETEMMRYIKRLENKDLALNHSMISLGSCTMKLNAATEMAPITWPEFGNMHPFCPQDQAQGYAQLLEELSTWLVDITGYDAVSLQPNSGAQGEYAGLLAIKQYHESRGDAHRNICLIPQSAHGTNPASAQLAGMKIVVTACDKAGNIDMADLKAKAAEVADNLSCIMVTYPSTHGVYEETIGEICEVIHQHGGQVYLDGANMNAQVGLTSPG 696          
BLAST of EY665021 vs. ExPASy Swiss-Prot
Match: GCSP_RALSO (Glycine dehydrogenase [decarboxylating] OS=Ralstonia solanacearum GN=gcvP PE=3 SV=1)

HSP 1 Score: 310.842 bits (795), Expect = 5.169e-84
Identity = 144/252 (57.14%), Postives = 187/252 (74.21%), Query Frame = 1
Query:   13 GANHFHSLAASLAEEVETAIPSGLTRESPYLTHPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKGNINIEELMNAAEANMDNLSTLMVTYPSTHGVYERSIDEICKINSRYGGQVYMDGANMNAXGRLTSPG 768
            GA  F  + A +A+    A P+ L R+S YLTHPVFN +H+EHE+LRY+  L  K+L+L  +MIPLGSCTMKLNAT EM+PVTWP FANIHPFAPADQ  GY+EM + L + LC  TG+ + SLQPNAG+ GEYAGL++I AYH +RG+ HR+VC+IP SAHGTNPA+A M GMK+V V  D +GN+++ +L   A  +  NL+ +M+TYPSTHGV+E  +  +C+I   +GGQVY+DGANMNA     +PG
Sbjct:  469 GAPDFDQVEAGIAD----AFPASLARQSAYLTHPVFNAHHSEHEMLRYLRSLADKDLALDRTMIPLGSCTMKLNATAEMLPVTWPEFANIHPFAPADQTVGYREMIDQLEQMLCAATGYAAVSLQPNAGSQGEYAGLLIIHAYHASRGESHRDVCLIPSSAHGTNPASAQMAGMKVVVVACDERGNVDLADLEKKAAEHSANLAAIMITYPSTHGVFEEGVKRVCEIVHSHGGQVYVDGANMNAMVGTAAPG 716          
BLAST of EY665021 vs. ExPASy Swiss-Prot
Match: GCSP_BURTA (Glycine dehydrogenase [decarboxylating] OS=Burkholderia thailandensis (strain E264 / ATCC 700388 / DSM 13276 / CIP 106301) GN=gcvP PE=3 SV=1)

HSP 1 Score: 310.842 bits (795), Expect = 5.169e-84
Identity = 146/246 (59.35%), Postives = 193/246 (78.46%), Query Frame = 1
Query:   31 SLAASLAEEVETAIPSGLTRESPYLTHPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKGNINIEELMNAAEANMDNLSTLMVTYPSTHGVYERSIDEICKINSRYGGQVYMDGANMNAXGRLTSPG 768
            +L A LA+    A+P+GL R S YLTH VFN++H+E E+LRY+  L  K+L+L  SMIPLGSCTMKLNAT+EM+PVTWP F  IHPFAPA+Q  GY+EM + L + L   TG+ + SLQPNAG+ GEYAGL++I AYH++RG+ HRNVC+IP SAHGTNPA+A M GMK+V V  DA+GN++I++L   AE + ++L+ +M+TYPSTHGV+E+++ EIC+I   +GGQVY+DGANMNA   LT+PG
Sbjct:  467 ALDAGLADTA--ALPAGLQRTSAYLTHHVFNRHHSETEMLRYLRSLSDKDLALDRSMIPLGSCTMKLNATSEMLPVTWPEFGRIHPFAPAEQTVGYREMIDQLEQMLVAATGYAAVSLQPNAGSQGEYAGLLIIHAYHESRGESHRNVCLIPASAHGTNPASAHMAGMKVVVVACDAQGNVDIDDLKAKAEQHANDLAAIMITYPSTHGVFEQNVREICEIVHAHGGQVYVDGANMNAMVGLTAPG 710          
BLAST of EY665021 vs. ExPASy Swiss-Prot
Match: GCSP_DICDI (Glycine dehydrogenase [decarboxylating], mitochondrial OS=Dictyostelium discoideum GN=gcvP PE=3 SV=1)

HSP 1 Score: 310.457 bits (794), Expect = 6.750e-84
Identity = 146/235 (62.13%), Postives = 178/235 (75.74%), Query Frame = 1
Query:   64 TAIPSGLTRESPYLTHPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKGNINIEELMNAAEANMDNLSTLMVTYPSTHGVYERSIDEICKINSRYGGQVYMDGANMNAXGRLTSPG 768
            + I     R++P+LTHP+FN+YH+EHELLRYIH LQ K+L L  +MIPLGSCTMKLNATTEM PV+WP F +IHPF PA+Q+ GY+EMF ++   LC +TGFD  SLQPNAG+ GEYAGLMVIR+Y  + G   RNVC+IPVSAHGTNPA+AAM GMK+V V  D  GNI++ +L   AE + D L+ LM+TYPSTHGV+E   ++IC I    GGQVYMDGANMNA   L  PG
Sbjct:  495 SVISEEFARQTPFLTHPIFNRYHSEHELLRYIHKLQKKDLGLTTAMIPLGSCTMKLNATTEMYPVSWPEFNSIHPFVPANQSLGYKEMFESISNMLCEVTGFDGCSLQPNAGSQGEYAGLMVIRSYLTSIGQSQRNVCLIPVSAHGTNPASAAMVGMKVVVVDCDTNGNIDVADLKAKAEKHKDTLAALMITYPSTHGVFEEGANDICDIIHANGGQVYMDGANMNAQVGLCRPG 729          
The following BLAST results are available for this feature:
BLAST of EY665021 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 368
Match NameE-valueIdentityDescription
GCSP_SHELP1.776e-8457.42Glycine dehydrogenase [decarboxylating] OS=Shewane... [more]
GCSP_LEPIN2.320e-8462.23Glycine dehydrogenase [decarboxylating] OS=Leptosp... [more]
GCSP_LEPIC2.320e-8462.23Glycine dehydrogenase [decarboxylating] OS=Leptosp... [more]
GCSP_PSEU23.957e-8458.85Glycine dehydrogenase [decarboxylating] OS=Pseudom... [more]
GCSP_ANAVT3.957e-8464.32Glycine dehydrogenase [decarboxylating] OS=Anabaen... [more]
GCSP_ANASP3.957e-8464.47Glycine dehydrogenase [decarboxylating] OS=Anabaen... [more]
GCSP_SHEPA5.169e-8458.94Glycine dehydrogenase [decarboxylating] OS=Shewane... [more]
GCSP_RALSO5.169e-8457.14Glycine dehydrogenase [decarboxylating] OS=Ralston... [more]
GCSP_BURTA5.169e-8459.35Glycine dehydrogenase [decarboxylating] OS=Burkhol... [more]
GCSP_DICDI6.750e-8462.13Glycine dehydrogenase [decarboxylating], mitochond... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-073-B04-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY665021 ID=EY665021; Name=EY665021; organism=Citrus sinensis; type=EST; length=770bp
TAGTTTTTTCTGGGGGCAAATCATTTCCATTCACTCGCTGCATCTCTGGC
TGAAGAGGTTGAGACTGCAATTCCGTCTGGATTAACAAGGGAGAGTCCGT
ATCTGACACATCCTGTTTTTAACAAATACCACACAGAGCATGAATTGCTT
AGATACATTCATCTGTTACAATCAAAGGAGCTCTCACTATGCCATAGTAT
GATTCCATTGGGATCTTGTACAATGAAATTGAATGCAACAACTGAAATGA
TGCCAGTGACATGGCCTAGCTTTGCTAACATACACCCTTTTGCCCCTGCT
GACCAGGCTCAGGGTTATCAGGAAATGTTTAACAATCTGGGTGAGTGGCT
GTGTACCATTACTGGCTTTGACTCTTTCTCTTTGCAACCAAATGCTGGTG
CAGCTGGTGAGTATGCTGGGCTCATGGTTATCCGCGCTTATCATAAGGCA
AGAGGAGACCATCACCGCAATGTGTGCATTATACCCGTGTCAGCCCATGG
GACAAATCCTGCTACTGCTGCCATGTGTGGAATGAAGATTGTTTCTGTTG
GAACTGATGCCAAGGGTAACATCAACATTGAAGAGTTAATGAATGCCGCA
GAAGCTAATATGGACAACCTATCAACCCTTATGGTAACGTACCCTTCAAC
TCATGGAGTTTATGAAAGAAGTATTGATGAGATATGCAAGATAAATTCAC
GATATGGAGGTCAAGTATATATGGACGGGGCTAACATGAATGCTCANGGT
CGTCTGACAAGCCCTGGTTA
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