EY665021

Overview
NameEY665021
Unique NameEY665021
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length770
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY665021 vs. ExPASy Swiss-Prot
Match: GCSPB_BACSU (Probable glycine dehydrogenase [decarboxylating] subunit 2 OS=Bacillus subtilis GN=gcvPB PE=3 SV=1)

HSP 1 Score: 166.777 bits (421), Expect = 1.205e-40
Identity = 89/212 (41.98%), Postives = 126/212 (59.43%), Query Frame = 1
Query:  133 TEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKGNINIEELMNAAEANMDNLSTLMVTYPSTHGVYERSIDEICKINSRYGGQVYMDGANMNAXGRLTSPG 768
            +E +++R+   L  +   +     PLGSCTMK N          P FA IHP    D  QG  E+  +L + L  ITG D  +LQP AGA GE+ GLM+IRAYH+ARGD  R   I+P SAHGTNPA+A + G + V+V ++ KG +++E+L  A     +  + LM+T P+T G++E  I E+ +I  + GG++Y DGAN+NA      PG
Sbjct:   52 SELDIMRHYTALSKRNHGVDSGFYPLGSCTMKYNPKINEKIARIPGFAAIHPLQDEDTVQGALELLYDLSKHLEEITGMDEVTLQPAAGAHGEWTGLMMIRAYHEARGDFKRTKVIVPDSAHGTNPASATVAGFETVTVKSNEKGLVDLEDLKRAVN---EETAALMLTNPNTLGLFEEQITEMAEIVHQAGGKLYYDGANLNAVLSKARPG 260          
BLAST of EY665021 vs. ExPASy Swiss-Prot
Match: GCSPB_THELT (Probable glycine dehydrogenase [decarboxylating] subunit 2 OS=Thermotoga lettingae (strain ATCC BAA-301 / DSM 14385 / TMO) GN=gcvPB PE=3 SV=1)

HSP 1 Score: 166.007 bits (419), Expect = 2.056e-40
Identity = 89/239 (37.24%), Postives = 134/239 (56.07%), Query Frame = 1
Query:   52 EEVETAIPSGLTRESPYLTHPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKGNINIEELMNAAEANMDNLSTLMVTYPSTHGVYERSIDEICKINSRYGGQVYMDGANMNAXGRLTSPG 768
            + ++   P  L R     T P+     +E +++R+   L  K  S+     PLGSCTMK N            F +IHP+ P +  QG  ++   L E+LC ITG D  +LQP AGA GE  G++++RAYH +R D  R+V ++P SAHGTNPA+AAM G  +V + +   G +++E+L N      D ++ LM+T P+T G++E+ I +I +   + G  +Y DGAN+NA      PG
Sbjct:   22 QRIDPVFPEHLKR-----TRPLRLPELSEPDVVRHYTALAEKNYSVDKGFYPLGSCTMKYNPKLNEYVAGLEGFTDIHPYQPWESVQGALQVMYELKEFLCEITGMDEMTLQPAAGAHGELTGMLIVRAYHLSRNDKKRHVALVPDSAHGTNPASAAMAGFDVVEIKSTEDGLVDLEQLENHLN---DEIAVLMLTNPNTLGLFEKDIVKIAEKVHQAGALLYYDGANLNAIMGKIKPG 252          
BLAST of EY665021 vs. ExPASy Swiss-Prot
Match: GCSPB_STAAE (Probable glycine dehydrogenase [decarboxylating] subunit 2 OS=Staphylococcus aureus (strain Newman) GN=gcvPB PE=3 SV=1)

HSP 1 Score: 165.622 bits (418), Expect = 2.685e-40
Identity = 87/211 (41.23%), Postives = 125/211 (59.24%), Query Frame = 1
Query:  136 EHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKGNINIEELMNAAEANMDNLSTLMVTYPSTHGVYERSIDEICKINSRYGGQVYMDGANMNAXGRLTSPG 768
            E +L+R+   L +K   + +   PLGSCTMK N          P F+  HP    DQ QG  E+  +L E L  ITG D  +LQP AGA GE+  LM+ +AYH+  G+ HR+  I+P SAHGTNPA+A+  G K V+V ++ +G +NI++L        +N + +M+T P+T G++E++I EI +I    GG +Y DGAN+NA      PG
Sbjct:   53 ELDLVRHYTELSNKNFGVDNGFYPLGSCTMKYNPKINEKVARIPGFSESHPLQDEDQVQGSLEIIYSLQEELKEITGMDEVTLQPAAGAHGEWTALMIFKAYHENNGEGHRDEVIVPDSAHGTNPASASFAGFKSVTVKSNERGEVNIDDLKRVVN---ENTAAIMLTNPNTLGIFEKNIMEIREIVHNAGGLLYYDGANLNAIMDKVRPG 260          
BLAST of EY665021 vs. ExPASy Swiss-Prot
Match: GCSPB_STAAC (Probable glycine dehydrogenase [decarboxylating] subunit 2 OS=Staphylococcus aureus (strain COL) GN=gcvPB PE=3 SV=1)

HSP 1 Score: 165.622 bits (418), Expect = 2.685e-40
Identity = 87/211 (41.23%), Postives = 125/211 (59.24%), Query Frame = 1
Query:  136 EHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKGNINIEELMNAAEANMDNLSTLMVTYPSTHGVYERSIDEICKINSRYGGQVYMDGANMNAXGRLTSPG 768
            E +L+R+   L +K   + +   PLGSCTMK N          P F+  HP    DQ QG  E+  +L E L  ITG D  +LQP AGA GE+  LM+ +AYH+  G+ HR+  I+P SAHGTNPA+A+  G K V+V ++ +G +NI++L        +N + +M+T P+T G++E++I EI +I    GG +Y DGAN+NA      PG
Sbjct:   53 ELDLVRHYTELSNKNFGVDNGFYPLGSCTMKYNPKINEKVARIPGFSESHPLQDEDQVQGSLEIIYSLQEELKEITGMDEVTLQPAAGAHGEWTALMIFKAYHENNGEGHRDEVIVPDSAHGTNPASASFAGFKSVTVKSNERGEVNIDDLKRVVN---ENTAAIMLTNPNTLGIFEKNIMEIREIVHNAGGLLYYDGANLNAIMDKVRPG 260          
BLAST of EY665021 vs. ExPASy Swiss-Prot
Match: GCSPB_LYSSC (Probable glycine dehydrogenase [decarboxylating] subunit 2 OS=Lysinibacillus sphaericus (strain C3-41) GN=gcvPB PE=3 SV=1)

HSP 1 Score: 165.622 bits (418), Expect = 2.685e-40
Identity = 96/249 (38.55%), Postives = 139/249 (55.82%), Query Frame = 1
Query:   28 HSLAASLAEEVETA--IPSGLTRESPYLTHPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKGNINIEELMNAAEANMDNLSTLMVTYPSTHGVYERSIDEICKINSRYGGQVYMDGANMNAXGRLTSPG 768
            +SL A    EV+ A  +P+ L R        V     +E +++R+   L  +   +     PLGSCTMK N         +  FAN+HP      AQG  E+  +L   L  ITG D  +LQP AGA GE+  LM+IRA+H+A G+ HRN  I+P SAHGTNPA+A + G + ++V +D  G ++IE+L     A   + + LM+T P+T G++E +I E+ ++    GG+VY DGAN+NA      PG
Sbjct:   20 YSLEALDVPEVDLADVLPANLVRSEAAELPEV-----SELDIMRHYTALSRRNHGVDSGFYPLGSCTMKYNPKINEAVARFSGFANVHPLQDESTAQGAMELLYDLQTSLVEITGMDEVTLQPAAGAHGEWTALMMIRAFHEANGEGHRNKVIVPDSAHGTNPASATVAGFETITVKSDDNGLVDIEDLRKVVGA---DTAALMLTNPNTLGLFEENIIEMAELIHSVGGKVYYDGANLNAVMSKARPG 260          
BLAST of EY665021 vs. ExPASy Swiss-Prot
Match: GCSPB_LISMO (Probable glycine dehydrogenase [decarboxylating] subunit 2 OS=Listeria monocytogenes GN=gcvPB PE=3 SV=1)

HSP 1 Score: 164.851 bits (416), Expect = 4.581e-40
Identity = 88/212 (41.51%), Postives = 125/212 (58.96%), Query Frame = 1
Query:  133 TEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKGNINIEELMNAAEANMDNLSTLMVTYPSTHGVYERSIDEICKINSRYGGQVYMDGANMNAXGRLTSPG 768
            +E E++R+   L +    +     PLGSCTMK N         +P FANIHP  P    QG  E+  +L   L  ITG D  +LQP AGA GE+ GLM+IRA+H+  GD  R   IIP SAHGTNPA+AA+ G  +V+V ++ KG +++ +L        ++ + LM+T P+T G++E+ I E+ +I    GG++Y DGAN+NA      PG
Sbjct:   53 SELEIMRHYTNLSNHNFGVDSGFYPLGSCTMKYNPKINEKVARFPGFANIHPNQPESSVQGALELLYDLQTSLVEITGMDEVTLQPAAGAHGEWTGLMLIRAFHEKNGDTKRTKVIIPDSAHGTNPASAAVAGFDVVTVKSNEKGLVDVADLKKVVG---EDTAALMLTNPNTLGLFEKDIVEMAEIVHEAGGKLYYDGANLNAIMAKVRPG 261          
BLAST of EY665021 vs. ExPASy Swiss-Prot
Match: GCSPB_LISMH (Probable glycine dehydrogenase [decarboxylating] subunit 2 OS=Listeria monocytogenes serotype 4a (strain HCC23) GN=gcvPB PE=3 SV=1)

HSP 1 Score: 164.851 bits (416), Expect = 4.581e-40
Identity = 88/212 (41.51%), Postives = 125/212 (58.96%), Query Frame = 1
Query:  133 TEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKGNINIEELMNAAEANMDNLSTLMVTYPSTHGVYERSIDEICKINSRYGGQVYMDGANMNAXGRLTSPG 768
            +E E++R+   L +    +     PLGSCTMK N         +P FANIHP  P    QG  E+  +L   L  ITG D  +LQP AGA GE+ GLM+IRA+H+  GD  R   IIP SAHGTNPA+AA+ G  +V+V ++ KG +++ +L        ++ + LM+T P+T G++E+ I E+ +I    GG++Y DGAN+NA      PG
Sbjct:   53 SELEIMRHYTNLSNHNFGVDSGFYPLGSCTMKYNPKINEKVARFPGFANIHPNQPESSVQGALELLYDLQTSLVEITGMDEVTLQPAAGAHGEWTGLMLIRAFHEKNGDTKRTKVIIPDSAHGTNPASAAVAGFDVVTVKSNEKGLVDVADLKKVVG---EDTAALMLTNPNTLGLFEKDIVEMAEIVHEAGGKLYYDGANLNAIMAKVRPG 261          
BLAST of EY665021 vs. ExPASy Swiss-Prot
Match: GCSPB_LISMF (Probable glycine dehydrogenase [decarboxylating] subunit 2 OS=Listeria monocytogenes serotype 4b (strain F2365) GN=gcvPB PE=3 SV=2)

HSP 1 Score: 164.851 bits (416), Expect = 4.581e-40
Identity = 88/212 (41.51%), Postives = 125/212 (58.96%), Query Frame = 1
Query:  133 TEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKGNINIEELMNAAEANMDNLSTLMVTYPSTHGVYERSIDEICKINSRYGGQVYMDGANMNAXGRLTSPG 768
            +E E++R+   L +    +     PLGSCTMK N         +P FANIHP  P    QG  E+  +L   L  ITG D  +LQP AGA GE+ GLM+IRA+H+  GD  R   IIP SAHGTNPA+AA+ G  +V+V ++ KG +++ +L        ++ + LM+T P+T G++E+ I E+ +I    GG++Y DGAN+NA      PG
Sbjct:   53 SELEIMRHYTNLSNHNFGVDSGFYPLGSCTMKYNPKINEKVARFPGFANIHPNQPESSVQGALELLYDLQTSLVEITGMDEVTLQPAAGAHGEWTGLMLIRAFHEKNGDTKRTKVIIPDSAHGTNPASAAVAGFDVVTVKSNEKGLVDVADLKKVVG---EDTAALMLTNPNTLGLFEKDIVEMAEIVHEAGGKLYYDGANLNAIMAKVRPG 261          
BLAST of EY665021 vs. ExPASy Swiss-Prot
Match: GCSPB_LISMC (Probable glycine dehydrogenase [decarboxylating] subunit 2 OS=Listeria monocytogenes serotype 4b (strain Clip81459) GN=gcvPB PE=3 SV=1)

HSP 1 Score: 164.851 bits (416), Expect = 4.581e-40
Identity = 88/212 (41.51%), Postives = 125/212 (58.96%), Query Frame = 1
Query:  133 TEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKGNINIEELMNAAEANMDNLSTLMVTYPSTHGVYERSIDEICKINSRYGGQVYMDGANMNAXGRLTSPG 768
            +E E++R+   L +    +     PLGSCTMK N         +P FANIHP  P    QG  E+  +L   L  ITG D  +LQP AGA GE+ GLM+IRA+H+  GD  R   IIP SAHGTNPA+AA+ G  +V+V ++ KG +++ +L        ++ + LM+T P+T G++E+ I E+ +I    GG++Y DGAN+NA      PG
Sbjct:   53 SELEIMRHYTNLSNHNFGVDSGFYPLGSCTMKYNPKINEKVARFPGFANIHPNQPESSVQGALELLYDLQTSLVEITGMDEVTLQPAAGAHGEWTGLMLIRAFHEKNGDTKRTKVIIPDSAHGTNPASAAVAGFDVVTVKSNEKGLVDVADLKKVVG---EDTAALMLTNPNTLGLFEKDIVEMAEIVHEAGGKLYYDGANLNAIMAKVRPG 261          
BLAST of EY665021 vs. ExPASy Swiss-Prot
Match: GCSPB_LISW6 (Probable glycine dehydrogenase [decarboxylating] subunit 2 OS=Listeria welshimeri serovar 6b (strain ATCC 35897 / DSM 20650 / SLCC5334) GN=gcvPB PE=3 SV=1)

HSP 1 Score: 164.466 bits (415), Expect = 5.983e-40
Identity = 88/212 (41.51%), Postives = 125/212 (58.96%), Query Frame = 1
Query:  133 TEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKGNINIEELMNAAEANMDNLSTLMVTYPSTHGVYERSIDEICKINSRYGGQVYMDGANMNAXGRLTSPG 768
            +E E++R+   L +    +     PLGSCTMK N         +P FANIHP  P    QG  E+  +L   L  ITG D  +LQP AGA GE+ GLM+IRA+H+  GD  R   IIP SAHGTNPA+AA+ G  +V+V ++ KG +++ +L        ++ + LM+T P+T G++E+ I E+ +I    GG++Y DGAN+NA      PG
Sbjct:   53 SELEIMRHYTNLSNHNFGVDSGFYPLGSCTMKYNPKINEKVARFPGFANIHPNQPESSVQGALELLYDLQTSLVEITGMDEVTLQPAAGAHGEWTGLMLIRAFHEKNGDTKRTKVIIPDSAHGTNPASAAVAGFDVVTVKSNEKGLVDVADLKKVVG---EDTAALMLTNPNTLGLFEKDIVEMAEIVHAAGGKLYYDGANLNAIMAKVRPG 261          
The following BLAST results are available for this feature:
BLAST of EY665021 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 368
Match NameE-valueIdentityDescription
GCSPB_BACSU1.205e-4041.98Probable glycine dehydrogenase [decarboxylating] s... [more]
GCSPB_THELT2.056e-4037.24Probable glycine dehydrogenase [decarboxylating] s... [more]
GCSPB_STAAE2.685e-4041.23Probable glycine dehydrogenase [decarboxylating] s... [more]
GCSPB_STAAC2.685e-4041.23Probable glycine dehydrogenase [decarboxylating] s... [more]
GCSPB_LYSSC2.685e-4038.55Probable glycine dehydrogenase [decarboxylating] s... [more]
GCSPB_LISMO4.581e-4041.51Probable glycine dehydrogenase [decarboxylating] s... [more]
GCSPB_LISMH4.581e-4041.51Probable glycine dehydrogenase [decarboxylating] s... [more]
GCSPB_LISMF4.581e-4041.51Probable glycine dehydrogenase [decarboxylating] s... [more]
GCSPB_LISMC4.581e-4041.51Probable glycine dehydrogenase [decarboxylating] s... [more]
GCSPB_LISW65.983e-4041.51Probable glycine dehydrogenase [decarboxylating] s... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-073-B04-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY665021 ID=EY665021; Name=EY665021; organism=Citrus sinensis; type=EST; length=770bp
TAGTTTTTTCTGGGGGCAAATCATTTCCATTCACTCGCTGCATCTCTGGC
TGAAGAGGTTGAGACTGCAATTCCGTCTGGATTAACAAGGGAGAGTCCGT
ATCTGACACATCCTGTTTTTAACAAATACCACACAGAGCATGAATTGCTT
AGATACATTCATCTGTTACAATCAAAGGAGCTCTCACTATGCCATAGTAT
GATTCCATTGGGATCTTGTACAATGAAATTGAATGCAACAACTGAAATGA
TGCCAGTGACATGGCCTAGCTTTGCTAACATACACCCTTTTGCCCCTGCT
GACCAGGCTCAGGGTTATCAGGAAATGTTTAACAATCTGGGTGAGTGGCT
GTGTACCATTACTGGCTTTGACTCTTTCTCTTTGCAACCAAATGCTGGTG
CAGCTGGTGAGTATGCTGGGCTCATGGTTATCCGCGCTTATCATAAGGCA
AGAGGAGACCATCACCGCAATGTGTGCATTATACCCGTGTCAGCCCATGG
GACAAATCCTGCTACTGCTGCCATGTGTGGAATGAAGATTGTTTCTGTTG
GAACTGATGCCAAGGGTAACATCAACATTGAAGAGTTAATGAATGCCGCA
GAAGCTAATATGGACAACCTATCAACCCTTATGGTAACGTACCCTTCAAC
TCATGGAGTTTATGAAAGAAGTATTGATGAGATATGCAAGATAAATTCAC
GATATGGAGGTCAAGTATATATGGACGGGGCTAACATGAATGCTCANGGT
CGTCTGACAAGCCCTGGTTA
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