EY665021

Overview
NameEY665021
Unique NameEY665021
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length770
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY665021 vs. ExPASy Swiss-Prot
Match: GCSPB_UNCTG (Probable glycine dehydrogenase [decarboxylating] subunit 2 OS=Uncultured termite group 1 bacterium phylotype Rs-D17 GN=gcvPB PE=3 SV=1)

HSP 1 Score: 147.132 bits (370), Expect = 9.884e-35
Identity = 90/238 (37.82%), Postives = 128/238 (53.78%), Query Frame = 1
Query:   55 EVETAIPSGLTRESPYLTHPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKGNINIEELMNAAEANMDNLSTLMVTYPSTHGVYERSIDEICKINSRYGGQVYMDGANMNAXGRLTSPG 768
            E++  IP  L R S      +     TE++L R+   L  K  +L  S  PLGSCTMK N           +F  IHP+ P    QG  ++   L + LC I+G D FSLQ  AGA GE+ GL++I  Y K+     R   IIP +AHGTNPA+AA+ G   VS+ +++ G+I  E+L          ++ +M+T P+T G +E++I EI +I    G  +Y DGAN+NA   +  PG
Sbjct:   23 EIDAQIPENLKRSSGLGLPSI-----TENDLSRHFTNLSRKNYALSTSFYPLGSCTMKYNPLINERVAKNEAFNFIHPYQPGKSMQGVLKIMYELEKDLCEISGMDCFSLQQAAGAHGEFTGLLIIAKYFKSI-KQKRTKIIIPDTAHGTNPASAALAGFGTVSLKSESDGSILPEKLKKIL---TPEIAAVMLTVPNTLGAFEKNIPEISRIVHENGSLLYYDGANLNAVMGIVRPG 251          
BLAST of EY665021 vs. ExPASy Swiss-Prot
Match: GCSPB_PELPB (Probable glycine dehydrogenase [decarboxylating] subunit 2 OS=Pelodictyon phaeoclathratiforme (strain DSM 5477 / BU-1) GN=gcvPB PE=3 SV=1)

HSP 1 Score: 146.747 bits (369), Expect = 1.291e-34
Identity = 86/239 (35.98%), Postives = 131/239 (54.81%), Query Frame = 1
Query:   52 EEVETAIPSGLTRESPYLTHPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKGNINIEELMNAAEANMDNLSTLMVTYPSTHGVYERSIDEICKINSRYGGQVYMDGANMNAXGRLTSPG 768
            + +E  IPS   R +P     V      E E++R+   L +    +  +M PLGSCTMK N          P F+ +HP  P +  QG  ++   L E L  I G  + +LQP AGA GE  G+++I+ YH++ G     + ++  SAHGTNPA+AA+ G  I+SV  +A G  ++++L +  +    +++ LM+T P+T G++E  I  I K+    G  +YMDGANMNA   +T PG
Sbjct:   27 QPLENIIPSKYLRTTPAELPEV-----AESEVVRHFVRLSNLNYHVDKNMYPLGSCTMKYNPKINDYTCDLPGFSALHPLQPGETTQGALQLMFELAEMLREIAGMAAVTLQPAAGAHGELTGILLIKKYHESIGSKRHKLLVVD-SAHGTNPASAALAGYDIISVKGNADGRTDLDDLRSKLDG---DVAALMLTNPNTIGLFETEILAISKMVHDNGSLLYMDGANMNALLGITRPG 256          
BLAST of EY665021 vs. ExPASy Swiss-Prot
Match: GCSPB_THET8 (Probable glycine dehydrogenase [decarboxylating] subunit 2 OS=Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579) GN=gcvPB PE=1 SV=1)

HSP 1 Score: 146.362 bits (368), Expect = 1.686e-34
Identity = 88/239 (36.82%), Postives = 135/239 (56.49%), Query Frame = 1
Query:   55 EVETAIPSGLTRESPYLTHPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGD-HHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKGNINIEELMNAAEANMDNLSTLMVTYPSTHGVYERSIDEICKINSRYGGQVYMDGANMNAXGRLTSPG 768
            + E  IP    RE P     V      E  L+R+   L  +++ +  +  PLGSCTMK N   ++       FA++HP+     AQG   +   LGE+L  +TG D+ +L+P AGA GE  G+++IRAYH+ RG+   R V ++P SAHG+NPATA+M G ++  + +  +G +++E L         +++ LM+T P+T G++ER I EI ++    G Q+Y DGAN+NA      PG
Sbjct:   25 KAEDLIPKEHLREVPPRLPEV-----DELTLVRHYTGLSRRQVGVDTTFYPLGSCTMKYNP--KLHEEAARLFADLHPYQDPRTAQGALRLMWELGEYLKALTGMDAITLEPAAGAHGELTGILIIRAYHEDRGEGRTRRVVLVPDSAHGSNPATASMAGYQVREIPSGPEGEVDLEALKRELG---PHVAALMLTNPNTLGLFERRILEISRLCKEAGVQLYYDGANLNAIMGWARPG 253          
BLAST of EY665021 vs. ExPASy Swiss-Prot
Match: GCSPB_THET2 (Probable glycine dehydrogenase [decarboxylating] subunit 2 OS=Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039) GN=gcvPB PE=3 SV=1)

HSP 1 Score: 146.362 bits (368), Expect = 1.686e-34
Identity = 88/239 (36.82%), Postives = 135/239 (56.49%), Query Frame = 1
Query:   55 EVETAIPSGLTRESPYLTHPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGD-HHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKGNINIEELMNAAEANMDNLSTLMVTYPSTHGVYERSIDEICKINSRYGGQVYMDGANMNAXGRLTSPG 768
            + E  IP    RE P     V      E  L+R+   L  +++ +  +  PLGSCTMK N   ++       FA++HP+     AQG   +   LGE+L  +TG D+ +L+P AGA GE  G+++IRAYH+ RG+   R V ++P SAHG+NPATA+M G ++  + +  +G +++E L         +++ LM+T P+T G++ER I EI ++    G Q+Y DGAN+NA      PG
Sbjct:   25 KAEDLIPKEHLREVPPRLPEV-----DELTLVRHYTGLSRRQVGVDTTFYPLGSCTMKYNP--KLHEEAARLFADLHPYQDPRTAQGALRLMWELGEYLKALTGMDAITLEPAAGAHGELTGILIIRAYHEDRGEGRTRRVVLVPDSAHGSNPATASMAGYQVREIPSGPEGEVDLEALKRELG---PHVAALMLTNPNTLGLFERRILEISRLCKEAGVQLYYDGANLNAIMGWARPG 253          
BLAST of EY665021 vs. ExPASy Swiss-Prot
Match: GCSPB_CHLTE (Probable glycine dehydrogenase [decarboxylating] subunit 2 OS=Chlorobium tepidum GN=gcvPB PE=3 SV=1)

HSP 1 Score: 145.206 bits (365), Expect = 3.756e-34
Identity = 83/212 (39.15%), Postives = 122/212 (57.55%), Query Frame = 1
Query:  136 EHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKGNINIEELMNAAEANMD-NLSTLMVTYPSTHGVYERSIDEICKINSRYGGQVYMDGANMNAXGRLTSPG 768
            E E++R+   L +    +  +M PLGSCTMK N          P FA++HP  P   +QG  ++   L E L  I G  + +LQP AGA GE  G+++I+ YH+  G+    + ++  SAHGTNPA+AA+ G + VSV  D  G  ++ +L     A +D  ++ LM+T P+T G++E+ I EI K+    G  +YMDGANMNA   +T PG
Sbjct:   50 ESEVVRHFIRLSNLNYHVDKNMYPLGSCTMKYNPKINDYTCDLPGFASMHPLQPESTSQGALQLMYELAEMLKEIAGMKAVTLQPAAGAHGELTGILLIKKYHEKLGNKRHKLLVVD-SAHGTNPASAALGGYECVSVKCDESGCTDMGDL----RAKLDGEVAALMLTNPNTVGIFEKQIPEIEKLVHGNGSLLYMDGANMNALLGITRPG 256          
BLAST of EY665021 vs. ExPASy Swiss-Prot
Match: GCSPB_PROVI (Probable glycine dehydrogenase [decarboxylating] subunit 2 OS=Prosthecochloris vibrioformis (strain DSM 265) (strain DSM 265) GN=gcvPB PE=3 SV=1)

HSP 1 Score: 144.436 bits (363), Expect = 6.407e-34
Identity = 88/233 (37.77%), Postives = 127/233 (54.51%), Query Frame = 1
Query:   70 IPSGLTRESPYLTHPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKGNINIEELMNAAEANMDNLSTLMVTYPSTHGVYERSIDEICKINSRYGGQVYMDGANMNAXGRLTSPG 768
            IP    R+SP     V      E E++R+   L +    +   M PLGSCTMK N        +   FA +HP  P    QG  ++ + L   L  ITG  S +LQP AGA GE AG+++I+ YH+A+    R   ++  SAHGTNPA+AA+ G  IVSV ++  G  ++ +L    E    +++ LM+T P+T G++E+ I  I  +  + G  +YMDGANMNA   +T PG
Sbjct:   33 IPGKFLRQSPAELPEV-----PESEVVRHFLRLSTLNYHVDKDMYPLGSCTMKYNPKINDETCSLEGFAALHPMQPESTVQGALQLMHELSGMLAEITGMASVTLQPAAGAHGELAGILLIKKYHEAQ-HSKRTTLLVVDSAHGTNPASAALAGYTIVSVKSNGIGRTDLNDL---KEKLNGDVAALMLTNPNTIGLFEKEIVAIADMVHKNGSLLYMDGANMNALLGITRPG 256          
BLAST of EY665021 vs. ExPASy Swiss-Prot
Match: GCSPB_THEAC (Probable glycine dehydrogenase [decarboxylating] subunit 2 OS=Thermoplasma acidophilum GN=gcvPB PE=3 SV=1)

HSP 1 Score: 143.665 bits (361), Expect = 1.093e-33
Identity = 81/214 (37.85%), Postives = 124/214 (57.94%), Query Frame = 1
Query:  133 TEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHH--RNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKGNINIEELMNAAEANMDNLSTLMVTYPSTHGVYERSIDEICKINSRYGGQVYMDGANMNAXGRLTSPG 768
            +E +++R+   L     ++   + PLGSCTMK N        ++  F NIHPF P    QG  ++   L E+L  I+  D+ +LQP AGA GE+ G+++I+ Y +   D H  R   I+P SAHGTNPA+A M G  +V + ++++G +++  L  A        + LM+T P+T G++E++I EI KI    G  +Y DGAN+NA   +TSPG
Sbjct:   48 SEVDVVRHYTRLSQMNYTVDVGIYPLGSCTMKYNPKYADRIASFAEFRNIHPFQPESTVQGTLQIMYELQEFLKKISDMDAVTLQPMAGADGEFTGILIIKKYFE---DLHEDRTEIIVPDSAHGTNPASATMGGFDVVEIPSNSEGMVDLNALKAAIS---KKTAALMITNPNTLGIFEQNITEIAKILHDAGALLYYDGANLNAIFGITSPG 255          
BLAST of EY665021 vs. ExPASy Swiss-Prot
Match: GCSPB_STAMF (Probable glycine dehydrogenase [decarboxylating] subunit 2 OS=Staphylothermus marinus (strain ATCC 43588 / DSM 3639 / F1) GN=gcvPB PE=3 SV=1)

HSP 1 Score: 142.51 bits (358), Expect = 2.435e-33
Identity = 87/234 (37.18%), Postives = 125/234 (53.42%), Query Frame = 1
Query:   70 IPSGLTRESPYLTHPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGD-HHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKGNINIEELMNAAEANMDNLSTLMVTYPSTHGVYERSIDEICKINSRYGGQVYMDGANMNAXGRLTSPG 768
            IP  + R+ P     V     +E E++R+   L      + +  +PLGSCTMK N               +HP       QG  E+   L +WL  ITG D  SL P AGA GE++G+++IR YH+ +     ++  IIP SAHGTNPA+A+M G K+V V +   GNI++E L +      ++ + LM+T PST G++E ++ EI KI     G +Y DGAN+N     T PG
Sbjct:   41 IPEKILRKKPPNLPEV-----SEVEVIRHYTRLTEMSYGVDNGPVPLGSCTMKYNPRIAWEISNDYRINMLHPLQDERTIQGLLEILYELQKWLANITGMDYCSLHPAAGAHGEFSGILIIRKYHELKKQLDRKSEIIIPDSAHGTNPASASMGGFKVVEVPSGEDGNIDMEALKSVVG---ESTAGLMITNPSTLGLFEENVVEISKIIHGVDGLLYYDGANLNGIMGYTRPG 266          
BLAST of EY665021 vs. ExPASy Swiss-Prot
Match: GCSPB_RHOBA (Probable glycine dehydrogenase [decarboxylating] subunit 2 OS=Rhodopirellula baltica GN=gcvPB PE=3 SV=1)

HSP 1 Score: 141.739 bits (356), Expect = 4.153e-33
Identity = 81/211 (38.39%), Postives = 117/211 (55.45%), Query Frame = 1
Query:  136 EHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKGNINIEELMNAAEANMDNLSTLMVTYPSTHGVYERSIDEICKINSRYGGQVYMDGANMNAXGRLTSPG 768
            E +++R+   L +  +S+     PLGSCTMK N        + P F N+HP       QG  E+   L      I+G    S+QP AGA GE A L+V  AY + +G   RNV +   SAHGTNPA+A M G K  +V ++A G +++E+L    +   D  +  M+T P+T G+++R I+EI K+    G  +Y+DGANMNA   +T PG
Sbjct:   54 EGDVVRHFVGLSTLNMSVDTHFYPLGSCTMKYNPKRNERIASLPGFLNVHPLQHESGLQGLLELLYELQGMFAEISGLPGVSMQPAAGAHGELAALLVAAAYFREQGS-DRNVVLTADSAHGTNPASAQMAGFKTKTVKSNANGLVDLEDLKAKLD---DKTAVFMLTNPNTLGLFDRQIEEINKLVHDAGALIYLDGANMNAILGITRPG 260          
BLAST of EY665021 vs. ExPASy Swiss-Prot
Match: GCSPB_SULSO (Probable glycine dehydrogenase [decarboxylating] subunit 2 OS=Sulfolobus solfataricus GN=gcvPB PE=3 SV=1)

HSP 1 Score: 139.043 bits (349), Expect = 2.692e-32
Identity = 85/236 (36.02%), Postives = 126/236 (53.39%), Query Frame = 1
Query:   61 ETAIPSGLTRESPYLTHPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKGNINIEELMNAAEANMDNLSTLMVTYPSTHGVYERSIDEICKINSRYGGQVYMDGANMNAXGRLTSPG 768
            E  IP  L RE+     P      +E E++R+   L      +   ++PLGSCTMK N   E        F   HP    D  QG  EM   L  W   ITG D  SLQ  AG+AGE+AG+++I+ YH+    ++++  ++  +AHGTNPA+AAM G K++ V ++A+G ++++ L    E   D  +  M+T P+T G++E +I EI KI       +Y DGAN+N    +  PG
Sbjct:   39 EMKIPKNLLREN----EPDLPSL-SELEVVRHFVRLSQMNFGVDIGIMPLGSCTMKYNPKIEEKATAITEFH--HPLEDEDYIQGILEMIYELQNWFSEITGMDECSLQVPAGSAGEFAGVLMIKKYHEEHNRNYKDTILVADTAHGTNPASAAMAGYKVMYVKSNAEGLVDMDIL---REIVNDKTAGFMLTNPNTLGLFEENILEISKIIHSTNAVLYYDGANLNGVLGIARPG 264          
The following BLAST results are available for this feature:
BLAST of EY665021 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 368
Match NameE-valueIdentityDescription
GCSPB_UNCTG9.884e-3537.82Probable glycine dehydrogenase [decarboxylating] s... [more]
GCSPB_PELPB1.291e-3435.98Probable glycine dehydrogenase [decarboxylating] s... [more]
GCSPB_THET81.686e-3436.82Probable glycine dehydrogenase [decarboxylating] s... [more]
GCSPB_THET21.686e-3436.82Probable glycine dehydrogenase [decarboxylating] s... [more]
GCSPB_CHLTE3.756e-3439.15Probable glycine dehydrogenase [decarboxylating] s... [more]
GCSPB_PROVI6.407e-3437.77Probable glycine dehydrogenase [decarboxylating] s... [more]
GCSPB_THEAC1.093e-3337.85Probable glycine dehydrogenase [decarboxylating] s... [more]
GCSPB_STAMF2.435e-3337.18Probable glycine dehydrogenase [decarboxylating] s... [more]
GCSPB_RHOBA4.153e-3338.39Probable glycine dehydrogenase [decarboxylating] s... [more]
GCSPB_SULSO2.692e-3236.02Probable glycine dehydrogenase [decarboxylating] s... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-073-B04-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY665021 ID=EY665021; Name=EY665021; organism=Citrus sinensis; type=EST; length=770bp
TAGTTTTTTCTGGGGGCAAATCATTTCCATTCACTCGCTGCATCTCTGGC
TGAAGAGGTTGAGACTGCAATTCCGTCTGGATTAACAAGGGAGAGTCCGT
ATCTGACACATCCTGTTTTTAACAAATACCACACAGAGCATGAATTGCTT
AGATACATTCATCTGTTACAATCAAAGGAGCTCTCACTATGCCATAGTAT
GATTCCATTGGGATCTTGTACAATGAAATTGAATGCAACAACTGAAATGA
TGCCAGTGACATGGCCTAGCTTTGCTAACATACACCCTTTTGCCCCTGCT
GACCAGGCTCAGGGTTATCAGGAAATGTTTAACAATCTGGGTGAGTGGCT
GTGTACCATTACTGGCTTTGACTCTTTCTCTTTGCAACCAAATGCTGGTG
CAGCTGGTGAGTATGCTGGGCTCATGGTTATCCGCGCTTATCATAAGGCA
AGAGGAGACCATCACCGCAATGTGTGCATTATACCCGTGTCAGCCCATGG
GACAAATCCTGCTACTGCTGCCATGTGTGGAATGAAGATTGTTTCTGTTG
GAACTGATGCCAAGGGTAACATCAACATTGAAGAGTTAATGAATGCCGCA
GAAGCTAATATGGACAACCTATCAACCCTTATGGTAACGTACCCTTCAAC
TCATGGAGTTTATGAAAGAAGTATTGATGAGATATGCAAGATAAATTCAC
GATATGGAGGTCAAGTATATATGGACGGGGCTAACATGAATGCTCANGGT
CGTCTGACAAGCCCTGGTTA
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