EY664987

Overview
NameEY664987
Unique NameEY664987
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length837
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY664987 vs. ExPASy Swiss-Prot
Match: PSAF_ODOSI (Photosystem I reaction center subunit III OS=Odontella sinensis GN=psaF PE=3 SV=1)

HSP 1 Score: 159.073 bits (401), Expect = 2.891e-38
Identity = 76/155 (49.03%), Postives = 99/155 (63.87%), Query Frame = 1
Query:  124 VADISGLTPCKESKQFAKRXXXXXXXXXXXXXXYAPDSAPALAIKATMEKTKRRFDNYGKYGLLCGSDGLPHLIVSGDQRHWGEFITPGLLFLYIAGWIGWVGRSYLIAISGEKKPAMKEIIIDVPLASRLVFRGFSWPVAAYREFVNGELVVKD 588
            +ADI GLT C ES  F KR              Y   S PALA++  +E+T+ RFD Y +  LLCG+DGLPHLI  G   H  EFI PG  F+YI+GWIGWVGR YL A+S  K P   EIII+VPLA +++  G+ WP++A++EF++ +LV  D
Sbjct:   23 LADIGGLTKCSESPAFEKRLKASVKKLEQRMGKYEAGSPPALALQQQIERTQARFDKYSRSELLCGTDGLPHLIADGRWSHAAEFILPGFGFIYISGWIGWVGRKYLRAVSTTKNPTESEIIINVPLALKIMTTGYIWPISAWQEFISNDLVALD 177          
BLAST of EY664987 vs. ExPASy Swiss-Prot
Match: PSAF_CYACA (Photosystem I reaction center subunit III OS=Cyanidium caldarium GN=psaF PE=3 SV=1)

HSP 1 Score: 148.288 bits (373), Expect = 5.103e-35
Identity = 73/151 (48.34%), Postives = 89/151 (58.94%), Query Frame = 1
Query:  136 SGLTPCKESKQFAKRXXXXXXXXXXXXXXYAPDSAPALAIKATMEKTKRRFDNYGKYGLLCGSDGLPHLIVSGDQRHWGEFITPGLLFLYIAGWIGWVGRSYLIAISGEKKPAMKEIIIDVPLASRLVFRGFSWPVAAYREFVNGELVVKD 588
            S LTPC+ S QF  R              Y  +S    +IK  +EKTK RFD Y K  LLCG DGLPHLI  GD +H GEF  P +LF+YIAGWIGW G+ YL       KP   EIIID+P A + +F GF+WP+ A +EF NG L+  +
Sbjct:   29 STLTPCENSAQFQARLNNNIKKLENKLTYYKQNSQEYTSIKQQIEKTKIRFDKYAKSSLLCGEDGLPHLITDGDWQHSGEFFIPSVLFIYIAGWIGWAGKGYLQYSKTLTKPNENEIIIDLPRALKYMFSGFAWPILALKEFKNGSLLASN 179          
BLAST of EY664987 vs. ExPASy Swiss-Prot
Match: PSAF_SYNP6 (Photosystem I reaction center subunit III OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=psaF PE=1 SV=2)

HSP 1 Score: 146.747 bits (369), Expect = 1.485e-34
Identity = 77/153 (50.33%), Postives = 96/153 (62.75%), Query Frame = 1
Query:  127 ADISGLTPCKESKQFAKRXXXXXXXXXXXXXXYAPDSAPALAIKATMEKTKRRFDNYGKYGLLCGSDGLPHLIVSGDQRHWGEFITPGLLFLYIAGWIGWVGRSYLIAISGEKKPAMKEIIIDVPLASRLVFRGFSWPVAAYREFVNGELVVK 585
            AD++GLTPC ES +F +R                       A  A   + K RF+NY +   LCG+DGLPHLIV G   H G+FI P LLFLYIAGWIGWVGRSYL AI  +K  A KEI+IDVPLA +    GF+WP+AA++EF +G+L+ K
Sbjct:   23 ADVAGLTPCSESPRFIQR-----------------------AEAAATPQAKARFENYSQ--ALCGADGLPHLIVDGRLDHAGDFIIPSLLFLYIAGWIGWVGRSYLQAIKSDKDAAGKEIVIDVPLAVKFSLTGFAWPLAAFQEFSSGKLLAK 150          
BLAST of EY664987 vs. ExPASy Swiss-Prot
Match: PSAF_THEEB (Photosystem I reaction center subunit III OS=Thermosynechococcus elongatus (strain BP-1) GN=psaF PE=1 SV=1)

HSP 1 Score: 138.272 bits (347), Expect = 5.280e-32
Identity = 71/154 (46.10%), Postives = 93/154 (60.39%), Query Frame = 1
Query:  127 ADISGLTPCKESKQFAKRXXXXXXXXXXXXXXYAPDSAPALAIKATMEKTKRRFDNYGKYGLLCGSDGLPHLIVSGDQRHWGEFITPGLLFLYIAGWIGWVGRSYLIAISGEKKPAMKEIIIDVPLASRLVFRGFSWPVAAYREFVNGELVVKD 588
            AD++GL PCK+S  F KR                  +A A+   A     ++RF+ Y +   LCG DGLPHL+V G     G+F+ P +LFLYIAGWIGWVGR+YLIA+    +   KEIIIDVPLA + +  GF+WP+AA +E  +GEL  KD
Sbjct:   23 ADVAGLVPCKDSPAFQKR------------------AAAAVNTTADPASGQKRFERYSQ--ALCGEDGLPHLVVDGRLSRAGDFLIPSVLFLYIAGWIGWVGRAYLIAVRNSGEANEKEIIIDVPLAIKCMLTGFAWPLAALKELASGELTAKD 156          
BLAST of EY664987 vs. ExPASy Swiss-Prot
Match: PSAF_SYNEN (Photosystem I reaction center subunit III OS=Synechococcus elongatus naegeli GN=psaF PE=1 SV=1)

HSP 1 Score: 138.272 bits (347), Expect = 5.280e-32
Identity = 71/154 (46.10%), Postives = 93/154 (60.39%), Query Frame = 1
Query:  127 ADISGLTPCKESKQFAKRXXXXXXXXXXXXXXYAPDSAPALAIKATMEKTKRRFDNYGKYGLLCGSDGLPHLIVSGDQRHWGEFITPGLLFLYIAGWIGWVGRSYLIAISGEKKPAMKEIIIDVPLASRLVFRGFSWPVAAYREFVNGELVVKD 588
            AD++GL PCK+S  F KR                  +A A+   A     ++RF+ Y +   LCG DGLPHL+V G     G+F+ P +LFLYIAGWIGWVGR+YLIA+    +   KEIIIDVPLA + +  GF+WP+AA +E  +GEL  KD
Sbjct:   23 ADVAGLVPCKDSPAFQKR------------------AAAAVNTTADPASGQKRFERYSQ--ALCGEDGLPHLVVDGRLSRAGDFLIPSVLFLYIAGWIGWVGRAYLIAVRNSGEANEKEIIIDVPLAIKCMLTGFAWPLAALKELASGELTAKD 156          
BLAST of EY664987 vs. ExPASy Swiss-Prot
Match: PSAF_SYNY3 (Photosystem I reaction center subunit III OS=Synechocystis sp. (strain PCC 6803) GN=psaF PE=1 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 5.114e-27
Identity = 66/153 (43.14%), Postives = 84/153 (54.90%), Query Frame = 1
Query:  130 DISGLTPCKESKQFAKRXXXXXXXXXXXXXXYAPDSAPALAIKATMEKTKRRFDNYGKYGLLCGSDGLPHLIVSGDQRHWGEFITPGLLFLYIAGWIGWVGRSYLIAISGEKKPAMKEIIIDVPLASRLVFRGFSWPVAAYREFVNGELVVKD 588
            D + LTPC E+                    Y   S   L         K R + Y     LCG +G PHLIV G   H G+F+ P +LFLYIAGWIGWVGRSYLI I   K P M+E++I+VPLA + +  GF WP+AA  E+ +G+LV+KD
Sbjct:   25 DFANLTPCSENPA------------------YLAKSKNFLNTTNDPNSGKIRAERYAS--ALCGPEGYPHLIVDGRFTHAGDFLIPSILFLYIAGWIGWVGRSYLIEIRESKNPEMQEVVINVPLAIKKMLGGFLWPLAAVGEYTSGKLVMKD 157          
BLAST of EY664987 vs. ExPASy Swiss-Prot
Match: PSAF_MASLA (Photosystem I reaction center subunit III OS=Mastigocladus laminosus GN=psaF PE=1 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 3.315e-26
Identity = 65/150 (43.33%), Postives = 85/150 (56.67%), Query Frame = 1
Query:  142 LTPCKESKQFAKRXXXXXXXXXXXXXXYAPDSAPALAIKATMEKTKRRFDNYGKYGLLCGSDGLPHLIVSGDQRHWGEFITPGLLFLYIAGWIGWVGRSYLIAISGE-KKPAMKEIIIDVPLASRLVFRGFSWPVAAYREFVNGELVVKD 588
            L PC ES  F +R                  +  A    A  E  K+RF+ Y +   LCG +GLPHLIV G   H G+F+ P +LFLYIAGWIGWVGR+YL  I  +      KEI I++P+A  ++  GF+WP AA +EF++GEL  KD
Sbjct:   28 LVPCSESPAFQQR------------------AQVARNTTADPESGKKRFERYSQ--ALCGPEGLPHLIVDGRLDHAGDFLIPSILFLYIAGWIGWVGRAYLQTIKKQGSNVEQKEIQIELPIALPIMLSGFAWPAAAIKEFLSGELTAKD 157          
BLAST of EY664987 vs. ExPASy Swiss-Prot
Match: PSAF_ANAVT (Photosystem I reaction center subunit III OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=psaF PE=3 SV=2)

HSP 1 Score: 111.309 bits (277), Expect = 6.912e-24
Identity = 53/110 (48.18%), Postives = 72/110 (65.45%), Query Frame = 1
Query:  259 ATMEKTKRRFDNYGKYGLLCGSDGLPHLIVSGDQRHWGEFITPGLLFLYIAGWIGWVGRSYLIAISGEKKPAMKEIIIDVPLASRLVFRGFSWPVAAYREFVNGELVVKD 588
            A  +  ++RF+ Y +   LCG +G PHLIV G     G+F+ P +LFLYIAGWIGWVGR+YL AI  +     KEI +D+ LA  ++  GF+WP AA +E ++GEL  KD
Sbjct:   49 ADPQSGQKRFERYSQ--ALCGPEGYPHLIVDGRLDRAGDFLIPSILFLYIAGWIGWVGRAYLQAIKKDSDTEQKEIQLDLGLALPIIATGFAWPAAAVKELLSGELTAKD 156          
BLAST of EY664987 vs. ExPASy Swiss-Prot
Match: PSAF_ANASP (Photosystem I reaction center subunit III OS=Anabaena sp. (strain PCC 7120) GN=psaF PE=3 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 1.179e-23
Identity = 52/110 (47.27%), Postives = 72/110 (65.45%), Query Frame = 1
Query:  259 ATMEKTKRRFDNYGKYGLLCGSDGLPHLIVSGDQRHWGEFITPGLLFLYIAGWIGWVGRSYLIAISGEKKPAMKEIIIDVPLASRLVFRGFSWPVAAYREFVNGELVVKD 588
            A  +  ++RF+ Y +   LCG +G PHLIV G     G+F+ P +LFLYIAGWIGWVGR+YL AI  +     KEI +D+ +A  ++  GF+WP AA +E ++GEL  KD
Sbjct:   49 ADPQSGQKRFERYSQ--ALCGPEGYPHLIVDGRLDRAGDFLIPSILFLYIAGWIGWVGRAYLQAIKKDSDTEQKEIQLDLGIALPIIATGFAWPAAAVKELLSGELTAKD 156          
BLAST of EY664987 vs. ExPASy Swiss-Prot
Match: PSAF_PROMA (Photosystem I reaction center subunit III OS=Prochlorococcus marinus GN=psaF PE=1 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 1.349e-19
Identity = 58/160 (36.25%), Postives = 81/160 (50.62%), Query Frame = 1
Query:  136 SGLTPCKESKQFAKRXXXXXXXXXXXXXXYAPDSAPALAIKATMEKTKRRFDNYGKYGLLCGSDGLPHLIVSG---------DQRHWGEFITPGLLFLYIAGWIGWVGRSYLIAISGEKKPAMKEIIIDVPLASRLVFRGFSWPVAAYREFVNGELVVKD 588
            S LT C E+ +F +R                       A +AT  K   RF+ Y K    CG DGLPHL+++          ++ H G+ + PG +F+Y+AG IGW GR YL A    K PA  EIIID  LA + + +G +WPV A ++  +G+L  KD
Sbjct:   40 SALTTCSENTRFNER-----------------------ASQATTPKDIARFERYSKAS--CGDDGLPHLVIAATIEPWGALANRHHEGDILIPGHIFIYVAGIIGWSGREYLRASKKTKNPAENEIIIDFALARQCLIKGAAWPVEANKQGRSGDLREKD 174          
The following BLAST results are available for this feature:
BLAST of EY664987 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 21
Match NameE-valueIdentityDescription
PSAF_ODOSI2.891e-3849.03Photosystem I reaction center subunit III OS=Odont... [more]
PSAF_CYACA5.103e-3548.34Photosystem I reaction center subunit III OS=Cyani... [more]
PSAF_SYNP61.485e-3450.33Photosystem I reaction center subunit III OS=Synec... [more]
PSAF_THEEB5.280e-3246.10Photosystem I reaction center subunit III OS=Therm... [more]
PSAF_SYNEN5.280e-3246.10Photosystem I reaction center subunit III OS=Synec... [more]
PSAF_SYNY35.114e-2743.14Photosystem I reaction center subunit III OS=Synec... [more]
PSAF_MASLA3.315e-2643.33Photosystem I reaction center subunit III OS=Masti... [more]
PSAF_ANAVT6.912e-2448.18Photosystem I reaction center subunit III OS=Anaba... [more]
PSAF_ANASP1.179e-2347.27Photosystem I reaction center subunit III OS=Anaba... [more]
PSAF_PROMA1.349e-1936.25Photosystem I reaction center subunit III OS=Proch... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-072-G04-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY664987 ID=EY664987; Name=EY664987; organism=Citrus sinensis; type=EST; length=837bp
TGCTCTTCTTCCGCTGGTTCTGAAGATACTTCCTCTTCTTCTGGCAAGGC
CGCCAAGCCGCTCCAGGCTTTCTCAGCAGCCCTTGCACTTTCCTCAATTC
TGCTATCAGCCCCACAGCTCGCAGTTGCCGACATCAGCGGCCTCACCCCA
TGCAAAGAGTCCAAACAATTCGCCAAGCGCGAGAAGCAGCAGCTCAAGAA
GCTCGAGTCTTCACTAAAACTGTACGCTCCCGACAGCGCCCCGGCTCTCG
CAATCAAAGCCACCATGGAGAAGACGAAACGGCGGTTTGACAACTACGGG
AAGTACGGGTTGCTGTGCGGGTCAGATGGGTTGCCGCATCTGATTGTGAG
CGGTGACCAGAGGCACTGGGGTGAGTTTATCACTCCGGGGTTGTTGTTTT
TGTACATAGCTGGATGGATCGGGTGGGTTGGCAGGAGCTACTTGATCGCC
ATTAGCGGTGAAAAGAAGCCGGCCATGAAGGAGATCATCATTGATGTTCC
TTTGGCTTCCAGGTTGGTCTTCAGAGGTTTTAGCTGGCCTGTTGCTGCTT
ACAGAGAGTTCGTTAATGGTGAACTTGTTGTCAAGGACGTTTAATCATTC
TATCTATTTCTATCTCCTCTGGAGTGGGACTCTACAGAGCATGGGGCTGA
CAGAAAGGGATGAAATATGAAAGCTGGATGCCTGGATTTCTGGGAATTGG
NTGAGGAATGGGGAGAGGGNAATNNTATGTGTCTAAAGTTTGTGAATTTG
ATTTTGGTGATTGATACTGATCCTGATCCTGATCAATCAAACTCAATNCT
CGTTTGCTCCCCAAAAAAAAAAAAAAAAAAAAAGCCG
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