EY664987

Overview
NameEY664987
Unique NameEY664987
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length837
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY664987 vs. ExPASy Swiss-Prot
Match: PSAF_GLOVI (Photosystem I reaction center subunit III OS=Gloeobacter violaceus GN=psaF PE=1 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 4.798e-17
Identity = 46/105 (43.81%), Postives = 62/105 (59.05%), Query Frame = 1 
Query:  274 TKRRFDNYGKYGLLCGSDGLPHLIVSGDQRHWGEFITPGLLFLYIAGWIGWVGRSYLIAISGEKKPAMKEIIIDVPLASRLVFRGFSWPVAAYREFVNGELVVKD 588
            TK++F+ Y      CG DG PHLI SG     G+F+ P +LFL+IAG +GW GR YL     E K    EIIID+P A + +  G  WPV A  E ++G++ V +
Sbjct:   75 TKQKFERYDT--AYCGQDGYPHLITSGQLDRAGDFLIPSVLFLWIAGALGWAGRLYL----AESKGPEDEIIIDLPKAIKCLLLGLIWPVQAIPELISGKIRVPE 173
The following BLAST results are available for this feature:
BLAST of EY664987 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 21
Match NameE-valueIdentityDescription
PSAF_GLOVI4.798e-1743.81Photosystem I reaction center subunit III OS=Gloeo... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-072-G04-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY664987 ID=EY664987; Name=EY664987; organism=Citrus sinensis; type=EST; length=837bp
TGCTCTTCTTCCGCTGGTTCTGAAGATACTTCCTCTTCTTCTGGCAAGGC
CGCCAAGCCGCTCCAGGCTTTCTCAGCAGCCCTTGCACTTTCCTCAATTC
TGCTATCAGCCCCACAGCTCGCAGTTGCCGACATCAGCGGCCTCACCCCA
TGCAAAGAGTCCAAACAATTCGCCAAGCGCGAGAAGCAGCAGCTCAAGAA
GCTCGAGTCTTCACTAAAACTGTACGCTCCCGACAGCGCCCCGGCTCTCG
CAATCAAAGCCACCATGGAGAAGACGAAACGGCGGTTTGACAACTACGGG
AAGTACGGGTTGCTGTGCGGGTCAGATGGGTTGCCGCATCTGATTGTGAG
CGGTGACCAGAGGCACTGGGGTGAGTTTATCACTCCGGGGTTGTTGTTTT
TGTACATAGCTGGATGGATCGGGTGGGTTGGCAGGAGCTACTTGATCGCC
ATTAGCGGTGAAAAGAAGCCGGCCATGAAGGAGATCATCATTGATGTTCC
TTTGGCTTCCAGGTTGGTCTTCAGAGGTTTTAGCTGGCCTGTTGCTGCTT
ACAGAGAGTTCGTTAATGGTGAACTTGTTGTCAAGGACGTTTAATCATTC
TATCTATTTCTATCTCCTCTGGAGTGGGACTCTACAGAGCATGGGGCTGA
CAGAAAGGGATGAAATATGAAAGCTGGATGCCTGGATTTCTGGGAATTGG
NTGAGGAATGGGGAGAGGGNAATNNTATGTGTCTAAAGTTTGTGAATTTG
ATTTTGGTGATTGATACTGATCCTGATCCTGATCAATCAAACTCAATNCT
CGTTTGCTCCCCAAAAAAAAAAAAAAAAAAAAAGCCG
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