CX043373

Overview
NameCX043373
Unique NameCX043373
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length668
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig9665 contig Csv1_Contig9665:23..690. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX043373 vs. ExPASy Swiss-Prot
Match: CDC2_BOVIN (Cell division control protein 2 homolog OS=Bos taurus GN=CDC2 PE=2 SV=2)

HSP 1 Score: 186.422 bits (472), Expect = 1.133e-46
Identity = 90/137 (65.69%), Postives = 112/137 (81.75%), Query Frame = 1
Query:  247 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFA-NDPRLIKTFLYXILRGIAYCHSHRVLHRDLKPQNLLID 654
            M+ Y K+EKIGEGTYGVVYK R+  T + +A+KKIRLE E+EGVPSTAIREISLLKE++H NIV LQDV+  + +LYL+FE+L +DLKK++DS P     D  L+K++LY IL+GI +CHS RVLHRDLKPQNLLID
Sbjct:    1 MEDYTKIEKIGEGTYGVVYKGRHKTTGQVVAMKKIRLESEEEGVPSTAIREISLLKELRHPNIVSLQDVLMQDSRLYLIFEFLSMDLKKYLDSIPPGQFMDSSLVKSYLYQILQGIVFCHSRRVLHRDLKPQNLLID 137          
BLAST of CX043373 vs. ExPASy Swiss-Prot
Match: CDK5_MOUSE (Cell division protein kinase 5 OS=Mus musculus GN=Cdk5 PE=1 SV=1)

HSP 1 Score: 185.652 bits (470), Expect = 1.933e-46
Identity = 87/137 (63.50%), Postives = 115/137 (83.94%), Query Frame = 1
Query:  247 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYXILRGIAYCHSHRVLHRDLKPQNLLIDR 657
            M +YEK+EKIGEGTYG V+KA+N  T+E +ALK++RL+ +DEGVPS+A+REI LLKE++H NIVRL DV+HS+KKL LVFE+ D DLKK+ DSC +   DP ++K+FL+ +L+G+ +CHS  VLHRDLKPQNLLI+R
Sbjct:    1 MQKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFEFCDQDLKKYFDSC-NGDLDPEIVKSFLFQLLKGLGFCHSRNVLHRDLKPQNLLINR 136          
BLAST of CX043373 vs. ExPASy Swiss-Prot
Match: CDK5_HUMAN (Cell division protein kinase 5 OS=Homo sapiens GN=CDK5 PE=1 SV=3)

HSP 1 Score: 185.652 bits (470), Expect = 1.933e-46
Identity = 87/137 (63.50%), Postives = 115/137 (83.94%), Query Frame = 1
Query:  247 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYXILRGIAYCHSHRVLHRDLKPQNLLIDR 657
            M +YEK+EKIGEGTYG V+KA+N  T+E +ALK++RL+ +DEGVPS+A+REI LLKE++H NIVRL DV+HS+KKL LVFE+ D DLKK+ DSC +   DP ++K+FL+ +L+G+ +CHS  VLHRDLKPQNLLI+R
Sbjct:    1 MQKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFEFCDQDLKKYFDSC-NGDLDPEIVKSFLFQLLKGLGFCHSRNVLHRDLKPQNLLINR 136          
BLAST of CX043373 vs. ExPASy Swiss-Prot
Match: CDK5_BOVIN (Cell division protein kinase 5 OS=Bos taurus GN=CDK5 PE=1 SV=2)

HSP 1 Score: 185.652 bits (470), Expect = 1.933e-46
Identity = 87/137 (63.50%), Postives = 115/137 (83.94%), Query Frame = 1
Query:  247 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYXILRGIAYCHSHRVLHRDLKPQNLLIDR 657
            M +YEK+EKIGEGTYG V+KA+N  T+E +ALK++RL+ +DEGVPS+A+REI LLKE++H NIVRL DV+HS+KKL LVFE+ D DLKK+ DSC +   DP ++K+FL+ +L+G+ +CHS  VLHRDLKPQNLLI+R
Sbjct:    1 MQKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFEFCDQDLKKYFDSC-NGDLDPEIVKSFLFQLLKGLGFCHSRNVLHRDLKPQNLLINR 136          
BLAST of CX043373 vs. ExPASy Swiss-Prot
Match: CDC2_RAT (Cell division control protein 2 homolog OS=Rattus norvegicus GN=Cdc2 PE=2 SV=1)

HSP 1 Score: 185.267 bits (469), Expect = 2.525e-46
Identity = 90/137 (65.69%), Postives = 112/137 (81.75%), Query Frame = 1
Query:  247 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFA-NDPRLIKTFLYXILRGIAYCHSHRVLHRDLKPQNLLID 654
            M+ Y K+EKIGEGTYGVVYK R+  T + +A+KKIRLE E+EGVPSTAIREISLLKE++H NIV LQDV+  + +LYL+FE+L +DLKK++DS P     D  L+K++LY IL+GI +CHS RVLHRDLKPQNLLID
Sbjct:    1 MEDYIKIEKIGEGTYGVVYKGRHRTTGQIVAMKKIRLESEEEGVPSTAIREISLLKELRHPNIVSLQDVLMQDSRLYLIFEFLSMDLKKYLDSIPPGQFMDSSLVKSYLYQILQGIVFCHSRRVLHRDLKPQNLLID 137          
BLAST of CX043373 vs. ExPASy Swiss-Prot
Match: CDC2_PONAB (Cell division control protein 2 homolog OS=Pongo abelii GN=CDC2 PE=2 SV=1)

HSP 1 Score: 184.882 bits (468), Expect = 3.297e-46
Identity = 89/137 (64.96%), Postives = 111/137 (81.02%), Query Frame = 1
Query:  247 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFA-NDPRLIKTFLYXILRGIAYCHSHRVLHRDLKPQNLLID 654
            M+ Y K+EKIGEGTYGVVYK R+  T + + +KKIRLE E+EGVPSTAIREISLLKE++H NIV LQDV+  + +LYL+FE+L +DLKK++DS P     D  L+K++LY IL+GI +CHS RVLHRDLKPQNLLID
Sbjct:    1 MEDYTKIEKIGEGTYGVVYKGRHKTTGQVVTMKKIRLESEEEGVPSTAIREISLLKELRHPNIVSLQDVLMQDSRLYLIFEFLSMDLKKYLDSIPPGQYMDSSLVKSYLYQILQGIVFCHSRRVLHRDLKPQNLLID 137          
BLAST of CX043373 vs. ExPASy Swiss-Prot
Match: CDC2_MOUSE (Cell division control protein 2 homolog OS=Mus musculus GN=Cdc2 PE=1 SV=3)

HSP 1 Score: 184.882 bits (468), Expect = 3.297e-46
Identity = 90/137 (65.69%), Postives = 113/137 (82.48%), Query Frame = 1
Query:  247 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFA-NDPRLIKTFLYXILRGIAYCHSHRVLHRDLKPQNLLID 654
            M+ Y K+EKIGEGTYGVVYK R+ VT + +A+KKIRLE E+EGVPSTAIREISLLKE++H NIV LQDV+  + +LYL+FE+L +DLKK++DS P     D  L+K++L+ IL+GI +CHS RVLHRDLKPQNLLID
Sbjct:    1 MEDYIKIEKIGEGTYGVVYKGRHRVTGQIVAMKKIRLESEEEGVPSTAIREISLLKELRHPNIVSLQDVLMQDSRLYLIFEFLSMDLKKYLDSIPPGQFMDSSLVKSYLHQILQGIVFCHSRRVLHRDLKPQNLLID 137          
BLAST of CX043373 vs. ExPASy Swiss-Prot
Match: CDC2_ORYLU (Cell division control protein 2 homolog OS=Oryzias luzonensis GN=cdc2 PE=2 SV=1)

HSP 1 Score: 184.496 bits (467), Expect = 4.306e-46
Identity = 87/139 (62.59%), Postives = 112/139 (80.58%), Query Frame = 1
Query:  247 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFA-NDPRLIKTFLYXILRGIAYCHSHRVLHRDLKPQNLLIDRR 660
            M+ Y K+EKIGEGTYGVVYK R+  T + +A+KKIRLE E+EGVPSTA+RE+SLL+E++H N+VRL DV+  E +LYL+FE+L +DLKK++DS P     DP L+K++LY IL GI +CH  RVLHRDLKPQNLLID +
Sbjct:    1 MEDYVKIEKIGEGTYGVVYKGRHKSTGQVVAMKKIRLESEEEGVPSTAVREVSLLQELKHPNVVRLLDVLMQESRLYLIFEFLSMDLKKYLDSIPSGQYMDPMLVKSYLYQILEGIYFCHRRRVLHRDLKPQNLLIDNK 139          
BLAST of CX043373 vs. ExPASy Swiss-Prot
Match: CDC2_ORYLA (Cell division control protein 2 homolog OS=Oryzias latipes GN=cdc2 PE=2 SV=1)

HSP 1 Score: 184.496 bits (467), Expect = 4.306e-46
Identity = 87/139 (62.59%), Postives = 112/139 (80.58%), Query Frame = 1
Query:  247 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFA-NDPRLIKTFLYXILRGIAYCHSHRVLHRDLKPQNLLIDRR 660
            M+ Y K+EKIGEGTYGVVYK R+  T + +A+KKIRLE E+EGVPSTA+RE+SLL+E++H N+VRL DV+  E +LYL+FE+L +DLKK++DS P     DP L+K++LY IL GI +CH  RVLHRDLKPQNLLID +
Sbjct:    1 MEDYVKIEKIGEGTYGVVYKGRHKSTGQVVAMKKIRLESEEEGVPSTAVREVSLLQELKHPNVVRLLDVLMQESRLYLIFEFLSMDLKKYLDSIPSGQYMDPMLVKSYLYQILEGIYFCHRRRVLHRDLKPQNLLIDNK 139          
BLAST of CX043373 vs. ExPASy Swiss-Prot
Match: CDC2_ORYJA (Cell division control protein 2 homolog OS=Oryzias javanicus GN=cdc2 PE=2 SV=1)

HSP 1 Score: 184.496 bits (467), Expect = 4.306e-46
Identity = 87/139 (62.59%), Postives = 112/139 (80.58%), Query Frame = 1
Query:  247 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFA-NDPRLIKTFLYXILRGIAYCHSHRVLHRDLKPQNLLIDRR 660
            M+ Y K+EKIGEGTYGVVYK R+  T + +A+KKIRLE E+EGVPSTA+RE+SLL+E++H N+VRL DV+  E +LYL+FE+L +DLKK++DS P     DP L+K++LY IL GI +CH  RVLHRDLKPQNLLID +
Sbjct:    1 MEDYVKIEKIGEGTYGVVYKGRHKSTGQVVAMKKIRLESEEEGVPSTAVREVSLLQELKHPNVVRLLDVLMQESRLYLIFEFLSMDLKKYLDSIPSGQYMDPMLVKSYLYQILEGIYFCHRRRVLHRDLKPQNLLIDNK 139          
The following BLAST results are available for this feature:
BLAST of CX043373 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CDC2_BOVIN1.133e-4665.69Cell division control protein 2 homolog OS=Bos tau... [more]
CDK5_MOUSE1.933e-4663.50Cell division protein kinase 5 OS=Mus musculus GN=... [more]
CDK5_HUMAN1.933e-4663.50Cell division protein kinase 5 OS=Homo sapiens GN=... [more]
CDK5_BOVIN1.933e-4663.50Cell division protein kinase 5 OS=Bos taurus GN=CD... [more]
CDC2_RAT2.525e-4665.69Cell division control protein 2 homolog OS=Rattus ... [more]
CDC2_PONAB3.297e-4664.96Cell division control protein 2 homolog OS=Pongo a... [more]
CDC2_MOUSE3.297e-4665.69Cell division control protein 2 homolog OS=Mus mus... [more]
CDC2_ORYLU4.306e-4662.59Cell division control protein 2 homolog OS=Oryzias... [more]
CDC2_ORYLA4.306e-4662.59Cell division control protein 2 homolog OS=Oryzias... [more]
CDC2_ORYJA4.306e-4662.59Cell division control protein 2 homolog OS=Oryzias... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS07_10F05_g Parent Washington Navel Orange Thrip-Challenged Flavedo cDNA Library UCRCS07 Citrus sinensis cDNA clone UCRCS07-10F05-L10-1-6.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX043373 ID=CX043373; Name=CX043373; organism=Citrus sinensis; type=EST; length=668bp
CTCACTTCTTCCACCGCCGCCGCTGACTCCAATCACCTCATTCTTACTCC
GGCGATCTCCCCCGTCGGCTTGGATCGTCCTCGCGTCTGTTACTGTATTA
TGCATTTGTATTTTTCTCTTTCGTAAGCGGTTAATTTTCTCTTCATAACA
CACTGCCGCCACCTACGCCGTCGATTCGTGCCGTTCTTGTCGCCGTCCGT
CGGTAGCAAGGACGCCTCGTTCGTGTAGCTGTTACATTAAGACTGAATGG
ACCAGTATGAAAAGGTTGAGAAGATTGGTGAAGGAACCTATGGAGTAGTT
TACAAGGCCCGTAATTGTGTCACGAATGAGACAATAGCATTGAAGAAGAT
CCGCCTTGAGCAGGAAGATGAAGGTGTGCCTAGCACCGCAATTAGAGAAA
TTTCCCTCTTGAAAGAAATGCAGCATGGGAACATTGTTAGGTTGCAAGAT
GTAGTGCATAGCGAGAAGAAACTTTATCTGGTTTTCGAGTATTTGGACTT
GGATTTGAAGAAGCACATGGATTCTTGCCCAGATTTTGCTAATGATCCTC
GTCTGATAAAAACATTCCTTTATCANATTCTACGTGGCATTGCCTACTGC
CATTCTCACCGGGTTCTTCATCGAGATTTGAAACCACAAAATTTGCTAAT
AGATCGTCGTACGAATGC
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