CX043373

Overview
NameCX043373
Unique NameCX043373
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length668
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig9665 contig Csv1_Contig9665:23..690. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX043373 vs. ExPASy Swiss-Prot
Match: CRK1_LEIME (Cell division protein kinase 2 homolog CRK1 OS=Leishmania mexicana GN=CRK1 PE=2 SV=1)

HSP 1 Score: 171.785 bits (434), Expect = 2.888e-42
Identity = 87/135 (64.44%), Postives = 107/135 (79.26%), Query Frame = 1
Query:  253 QYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYXILRGIAYCHSHRVLHRDLKPQNLLIDR 657
            +YE+ EKIGEGTYGVVYKAR+  T  T+ALK+IRL+ E+EGVP TAIREISLLKE++H NIV+L DV HSE +L +VFEYLDLDLKK++D   +   D   I+ F+  +LRG+A+CH   VLHRDLKPQNLLI R
Sbjct:    4 RYERQEKIGEGTYGVVYKARDTSTAATVALKRIRLDSEEEGVPCTAIREISLLKELRHENIVKLLDVCHSEHRLTIVFEYLDLDLKKYLDR-ENGNLDAATIQHFMRDLLRGVAFCHQRSVLHRDLKPQNLLISR 137          
BLAST of CX043373 vs. ExPASy Swiss-Prot
Match: CDC2C_DROME (Cell division control protein 2 cognate OS=Drosophila melanogaster GN=cdc2c PE=1 SV=1)

HSP 1 Score: 171.014 bits (432), Expect = 4.927e-42
Identity = 82/136 (60.29%), Postives = 109/136 (80.15%), Query Frame = 1
Query:  247 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYXILRGIAYCHSHRVLHRDLKPQNLLID 654
            +D +++ EKIGEGTYG+VYKAR+  T + +ALKKIRLE E EGVPSTAIREISLLK ++H N+V+L DVV S   LY++FEYL++DLKK MD   D    P+LIK++++ IL  + +CH++R+LHRDLKPQNLL+D
Sbjct:    5 LDNFQRAEKIGEGTYGIVYKARSNSTGQDVALKKIRLEGETEGVPSTAIREISLLKNLKHPNVVQLFDVVISGNNLYMIFEYLNMDLKKLMDKKKDVFT-PQLIKSYMHQILDAVGFCHTNRILHRDLKPQNLLVD 139          
BLAST of CX043373 vs. ExPASy Swiss-Prot
Match: CDK17_MOUSE (Cell division protein kinase 17 OS=Mus musculus GN=Cdk17 PE=1 SV=2)

HSP 1 Score: 169.859 bits (429), Expect = 1.098e-41
Identity = 84/138 (60.87%), Postives = 106/138 (76.81%), Query Frame = 1
Query:  247 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYXILRGIAYCHSHRVLHRDLKPQNLLIDRR 660
            M+ Y K+EK+GEGTY  VYK R+ +T   +ALK+IRLE E EG P TAIRE+SLLK+++H NIV L D+VH++K L LVFEYLD DLK++MD C +  +    +K FLY ILRG+AYCH  +VLHRDLKPQNLLI+ R
Sbjct:  189 METYIKLEKLGEGTYATVYKGRSKLTENLVALKEIRLEHE-EGAPCTAIREVSLLKDLKHANIVTLHDIVHTDKSLTLVFEYLDKDLKQYMDDCGNIMS-MHNVKLFLYQILRGLAYCHRRKVLHRDLKPQNLLINER 324          
BLAST of CX043373 vs. ExPASy Swiss-Prot
Match: CDC2_PETHY (Cell division control protein 2 homolog (Fragment) OS=Petunia hybrida GN=CDC2 PE=2 SV=1)

HSP 1 Score: 169.859 bits (429), Expect = 1.098e-41
Identity = 81/90 (90.00%), Postives = 85/90 (94.44%), Query Frame = 1
Query:  370 EGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYXILRGIAYCHSHRVLHRDLKPQ 639
            EGVPSTAIREISLLKEMQH NIVRLQDVVHSEK+LYLVFEYLDLDLKKHMDS P+F+ DPRL+K FLY ILRGIAYCHSHRVLHRDLKPQ
Sbjct:    1 EGVPSTAIREISLLKEMQHANIVRLQDVVHSEKRLYLVFEYLDLDLKKHMDSSPEFSKDPRLVKMFLYQILRGIAYCHSHRVLHRDLKPQ 90          
BLAST of CX043373 vs. ExPASy Swiss-Prot
Match: CDK17_RAT (Cell division protein kinase 17 OS=Rattus norvegicus GN=Cdk17 PE=1 SV=1)

HSP 1 Score: 169.474 bits (428), Expect = 1.434e-41
Identity = 84/138 (60.87%), Postives = 105/138 (76.09%), Query Frame = 1
Query:  247 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYXILRGIAYCHSHRVLHRDLKPQNLLIDRR 660
            M+ Y K+EK+GEGTY  VYK R+ +T   +ALK+IRLE E EG P TAIRE+SLLK+++H NIV L D+VH++K L LVFEYLD DLK++MD C    +    +K FLY ILRG+AYCH  +VLHRDLKPQNLLI+ R
Sbjct:  189 METYIKLEKLGEGTYATVYKGRSKLTENLVALKEIRLEHE-EGAPCTAIREVSLLKDLKHANIVTLHDIVHTDKSLTLVFEYLDKDLKQYMDDCGSIMS-MHNVKLFLYQILRGLAYCHRRKVLHRDLKPQNLLINER 324          
BLAST of CX043373 vs. ExPASy Swiss-Prot
Match: CDK17_HUMAN (Cell division protein kinase 17 OS=Homo sapiens GN=CDK17 PE=1 SV=2)

HSP 1 Score: 168.703 bits (426), Expect = 2.445e-41
Identity = 83/138 (60.14%), Postives = 106/138 (76.81%), Query Frame = 1
Query:  247 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYXILRGIAYCHSHRVLHRDLKPQNLLIDRR 660
            M+ Y K+EK+GEGTY  VYK R+ +T   +ALK+IRLE E EG P TAIRE+SLLK+++H NIV L D+VH++K L LVFEYLD DLK++MD C +  +    +K FLY ILRG+AYCH  +VLHRDLKPQNLLI+ +
Sbjct:  189 METYIKLEKLGEGTYATVYKGRSKLTENLVALKEIRLEHE-EGAPCTAIREVSLLKDLKHANIVTLHDIVHTDKSLTLVFEYLDKDLKQYMDDCGNIMS-MHNVKLFLYQILRGLAYCHRRKVLHRDLKPQNLLINEK 324          
BLAST of CX043373 vs. ExPASy Swiss-Prot
Match: CDC2_CAEBR (Cell division control protein 2 homolog OS=Caenorhabditis briggsae GN=cdk-1 PE=3 SV=1)

HSP 1 Score: 166.392 bits (420), Expect = 1.214e-40
Identity = 79/139 (56.83%), Postives = 105/139 (75.54%), Query Frame = 1
Query:  247 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFANDP-RLIKTFLYXILRGIAYCHSHRVLHRDLKPQNLLIDRR 660
            +D + K+EKIGEGTYGVVYK RN  T   +A+KKIRLE EDEGVPSTA+REISLLKE+QH N+V L+ V+  E +LYL+FE+L  DLK++MD+       P   +K++ + IL+ + +CH  RV+HRDLKPQNLL+D +
Sbjct:   13 LDDFTKLEKIGEGTYGVVYKGRNRRTQAMVAMKKIRLESEDEGVPSTAVREISLLKELQHPNVVGLEAVIMQENRLYLIFEFLSYDLKRYMDTLSKEEYLPSETLKSYTFQILQAMCFCHQRRVIHRDLKPQNLLVDEK 151          
BLAST of CX043373 vs. ExPASy Swiss-Prot
Match: CDK16_HUMAN (Cell division protein kinase 16 OS=Homo sapiens GN=CDK16 PE=1 SV=1)

HSP 1 Score: 166.007 bits (419), Expect = 1.585e-40
Identity = 79/138 (57.25%), Postives = 107/138 (77.54%), Query Frame = 1
Query:  247 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYXILRGIAYCHSHRVLHRDLKPQNLLIDRR 660
            ++ Y K++K+GEGTY  VYK ++ +T+  +ALK+IRLE E EG P TAIRE+SLLK+++H NIV L D++H+EK L LVFEYLD DLK+++D C +  N    +K FL+ +LRG+AYCH  +VLHRDLKPQNLLI+ R
Sbjct:  162 LETYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHE-EGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEYLDKDLKQYLDDCGNIIN-MHNVKLFLFQLLRGLAYCHRQKVLHRDLKPQNLLINER 297          
BLAST of CX043373 vs. ExPASy Swiss-Prot
Match: CDK16_RAT (Cell division protein kinase 16 OS=Rattus norvegicus GN=Cdk16 PE=1 SV=1)

HSP 1 Score: 165.622 bits (418), Expect = 2.070e-40
Identity = 79/138 (57.25%), Postives = 107/138 (77.54%), Query Frame = 1
Query:  247 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYXILRGIAYCHSHRVLHRDLKPQNLLIDRR 660
            ++ Y K++K+GEGTY  VYK ++ +T+  +ALK+IRLE E EG P TAIRE+SLLK+++H NIV L D++H+EK L LVFEYLD DLK+++D C +  N    +K FL+ +LRG+AYCH  +VLHRDLKPQNLLI+ R
Sbjct:  162 LETYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHE-EGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEYLDKDLKQYLDDCGNVIN-MHNVKLFLFQLLRGLAYCHRQKVLHRDLKPQNLLINER 297          
BLAST of CX043373 vs. ExPASy Swiss-Prot
Match: CDK16_MOUSE (Cell division protein kinase 16 OS=Mus musculus GN=Cdk16 PE=1 SV=1)

HSP 1 Score: 165.622 bits (418), Expect = 2.070e-40
Identity = 79/138 (57.25%), Postives = 107/138 (77.54%), Query Frame = 1
Query:  247 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYXILRGIAYCHSHRVLHRDLKPQNLLIDRR 660
            ++ Y K++K+GEGTY  VYK ++ +T+  +ALK+IRLE E EG P TAIRE+SLLK+++H NIV L D++H+EK L LVFEYLD DLK+++D C +  N    +K FL+ +LRG+AYCH  +VLHRDLKPQNLLI+ R
Sbjct:  162 LETYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHE-EGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEYLDKDLKQYLDDCGNVIN-MHNVKLFLFQLLRGLAYCHRQKVLHRDLKPQNLLINER 297          
The following BLAST results are available for this feature:
BLAST of CX043373 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CRK1_LEIME2.888e-4264.44Cell division protein kinase 2 homolog CRK1 OS=Lei... [more]
CDC2C_DROME4.927e-4260.29Cell division control protein 2 cognate OS=Drosoph... [more]
CDK17_MOUSE1.098e-4160.87Cell division protein kinase 17 OS=Mus musculus GN... [more]
CDC2_PETHY1.098e-4190.00Cell division control protein 2 homolog (Fragment)... [more]
CDK17_RAT1.434e-4160.87Cell division protein kinase 17 OS=Rattus norvegic... [more]
CDK17_HUMAN2.445e-4160.14Cell division protein kinase 17 OS=Homo sapiens GN... [more]
CDC2_CAEBR1.214e-4056.83Cell division control protein 2 homolog OS=Caenorh... [more]
CDK16_HUMAN1.585e-4057.25Cell division protein kinase 16 OS=Homo sapiens GN... [more]
CDK16_RAT2.070e-4057.25Cell division protein kinase 16 OS=Rattus norvegic... [more]
CDK16_MOUSE2.070e-4057.25Cell division protein kinase 16 OS=Mus musculus GN... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS07_10F05_g Parent Washington Navel Orange Thrip-Challenged Flavedo cDNA Library UCRCS07 Citrus sinensis cDNA clone UCRCS07-10F05-L10-1-6.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX043373 ID=CX043373; Name=CX043373; organism=Citrus sinensis; type=EST; length=668bp
CTCACTTCTTCCACCGCCGCCGCTGACTCCAATCACCTCATTCTTACTCC
GGCGATCTCCCCCGTCGGCTTGGATCGTCCTCGCGTCTGTTACTGTATTA
TGCATTTGTATTTTTCTCTTTCGTAAGCGGTTAATTTTCTCTTCATAACA
CACTGCCGCCACCTACGCCGTCGATTCGTGCCGTTCTTGTCGCCGTCCGT
CGGTAGCAAGGACGCCTCGTTCGTGTAGCTGTTACATTAAGACTGAATGG
ACCAGTATGAAAAGGTTGAGAAGATTGGTGAAGGAACCTATGGAGTAGTT
TACAAGGCCCGTAATTGTGTCACGAATGAGACAATAGCATTGAAGAAGAT
CCGCCTTGAGCAGGAAGATGAAGGTGTGCCTAGCACCGCAATTAGAGAAA
TTTCCCTCTTGAAAGAAATGCAGCATGGGAACATTGTTAGGTTGCAAGAT
GTAGTGCATAGCGAGAAGAAACTTTATCTGGTTTTCGAGTATTTGGACTT
GGATTTGAAGAAGCACATGGATTCTTGCCCAGATTTTGCTAATGATCCTC
GTCTGATAAAAACATTCCTTTATCANATTCTACGTGGCATTGCCTACTGC
CATTCTCACCGGGTTCTTCATCGAGATTTGAAACCACAAAATTTGCTAAT
AGATCGTCGTACGAATGC
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