CX043372

Overview
NameCX043372
Unique NameCX043372
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length709
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX043372 vs. ExPASy Swiss-Prot
Match: CDKA1_ARATH (Cyclin-dependent kinase A-1 OS=Arabidopsis thaliana GN=CDKA-1 PE=1 SV=1)

HSP 1 Score: 239.195 bits (609), Expect = 1.649e-62
Identity = 109/140 (77.86%), Postives = 126/140 (90.00%), Query Frame = -3
Query:  288 IPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSEIDELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGIDLLSKMLCMDPSRRITARSALEHEYFRDVEFVP 707
            IPVRTFTHEVVTLWYRAPEILLGS HYSTPVD+WSVGCIFAEM++Q+PLFPGDSEID+LFKIFR++GTP EDTW GVTSLPD+KSAFPKW   +L T V NL+P G+DLLSKML MDP++RI AR+ALEHEYF+D+  +P
Sbjct:  155 IPVRTFTHEVVTLWYRAPEILLGSHHYSTPVDIWSVGCIFAEMISQKPLFPGDSEIDQLFKIFRIMGTPYEDTWRGVTSLPDYKSAFPKWKPTDLETFVPNLDPDGVDLLSKMLLMDPTKRINARAALEHEYFKDLGGMP 294          
BLAST of CX043372 vs. ExPASy Swiss-Prot
Match: CDK3_HUMAN (Cell division protein kinase 3 OS=Homo sapiens GN=CDK3 PE=1 SV=1)

HSP 1 Score: 209.534 bits (532), Expect = 1.399e-53
Identity = 97/147 (65.99%), Postives = 119/147 (80.95%), Query Frame = -3
Query:  267 IPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSEIDELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGIDLLSKMLCMDPSRRITARSALEHEYFRDVEFVP*YLLYML 707
            +P+RT+THEVVTLWYRAPEILLGS+ Y+T VD+WS+GCIFAEMV ++ LFPGDSEID+LF+IFR+LGTP+EDTWPGVT LPD+K +FPKW  K L  +V NLEP G DLL ++L  DPS+RITA++AL H YF   E  P    Y+L
Sbjct:  154 VPLRTYTHEVVTLWYRAPEILLGSKFYTTAVDIWSIGCIFAEMVTRKALFPGDSEIDQLFRIFRMLGTPSEDTWPGVTQLPDYKGSFPKWTRKGLEEIVPNLEPEGRDLLMQLLQYDPSQRITAKTALAHPYFSSPEPSPAARQYVL 300          
BLAST of CX043372 vs. ExPASy Swiss-Prot
Match: CDC28_CANAL (Cell division control protein 28 OS=Candida albicans GN=CDC28 PE=2 SV=1)

HSP 1 Score: 202.986 bits (515), Expect = 1.310e-51
Identity = 92/135 (68.15%), Postives = 110/135 (81.48%), Query Frame = -3
Query:  303 IPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSEIDELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGIDLLSKMLCMDPSRRITARSALEHEYFRD 707
            +P+R +THEVVTLWYRAPEILLG + YST VD+WSVGCIFAEM N++PLFPGDSEIDE+F+IFR+LGTPNE+ WP V  LPDFKS+FP+W  K L   V +L+  GIDLL +ML  DPSRRI+A+ AL H YF D
Sbjct:  160 VPLRAYTHEVVTLWYRAPEILLGGKQYSTGVDMWSVGCIFAEMCNRKPLFPGDSEIDEIFRIFRILGTPNEEIWPDVNYLPDFKSSFPQWKKKPLSEAVPSLDANGIDLLDQMLVYDPSRRISAKRALIHPYFND 294          
BLAST of CX043372 vs. ExPASy Swiss-Prot
Match: CDK2_CARAU (Cell division protein kinase 2 OS=Carassius auratus GN=cdk2 PE=2 SV=1)

HSP 1 Score: 201.06 bits (510), Expect = 4.976e-51
Identity = 89/136 (65.44%), Postives = 114/136 (83.82%), Query Frame = -3
Query:  300 IPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSEIDELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGIDLLSKMLCMDPSRRITARSALEHEYFRDV 707
            +PVRT+THEVVTLWYRAPEILLG ++YST VD+WS+GCIFAEM+ ++ LFPGDSEID+LF+IFR LGTP+E  WPGVTS+PD+K +FPKW  ++L  VV  L+  G DLL +ML  DP++RI+A++AL H +FRDV
Sbjct:  154 VPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMITRKALFPGDSEIDQLFRIFRTLGTPDESIWPGVTSMPDYKPSFPKWARQDLSKVVPPLDEDGRDLLGQMLIYDPNKRISAKNALVHRFFRDV 289          
BLAST of CX043372 vs. ExPASy Swiss-Prot
Match: CDC2_SCHPO (Cell division control protein 2 OS=Schizosaccharomyces pombe GN=cdc2 PE=1 SV=1)

HSP 1 Score: 199.519 bits (506), Expect = 1.448e-50
Identity = 90/135 (66.67%), Postives = 109/135 (80.74%), Query Frame = -3
Query:  303 IPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSEIDELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGIDLLSKMLCMDPSRRITARSALEHEYFRD 707
            +P+R +THE+VTLWYRAPE+LLGSRHYST VD+WSVGCIFAEM+ + PLFPGDSEIDE+FKIF+VLGTPNE+ WPGVT L D+KS FP+W   +L  VV N E   I+LLS ML  DP+ RI+A+ AL+  Y RD
Sbjct:  161 VPLRNYTHEIVTLWYRAPEVLLGSRHYSTGVDIWSVGCIFAEMIRRSPLFPGDSEIDEIFKIFQVLGTPNEEVWPGVTLLQDYKSTFPRWKRMDLHKVVPNGEEDAIELLSAMLVYDPAHRISAKRALQQNYLRD 295          
BLAST of CX043372 vs. ExPASy Swiss-Prot
Match: CDC2_CARAU (Cell division control protein 2 homolog OS=Carassius auratus GN=cdc2 PE=2 SV=1)

HSP 1 Score: 198.749 bits (504), Expect = 2.470e-50
Identity = 88/137 (64.23%), Postives = 110/137 (80.29%), Query Frame = -3
Query:  297 IPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSEIDELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGIDLLSKMLCMDPSRRITARSALEHEYFRDVE 707
            +PVR +THEVVTLWYRAPE+LLG+  YSTPVDVWS+G IFAE+  ++PLF GDSEID+LF+IFR LGTPN + WP V SLPD+K+ FPKW S  L + V+NL+  GIDLL+KML  DP +RI+AR A+ H YF D++
Sbjct:  155 VPVRVYTHEVVTLWYRAPEVLLGASRYSTPVDVWSIGTIFAELATKKPLFHGDSEIDQLFRIFRTLGTPNNEVWPDVESLPDYKNTFPKWKSGNLASTVKNLDKNGIDLLTKMLIYDPPKRISARQAMTHPYFDDLD 291          
BLAST of CX043372 vs. ExPASy Swiss-Prot
Match: CDK2_RAT (Cell division protein kinase 2 OS=Rattus norvegicus GN=Cdk2 PE=2 SV=1)

HSP 1 Score: 197.208 bits (500), Expect = 7.186e-50
Identity = 89/136 (65.44%), Postives = 113/136 (83.09%), Query Frame = -3
Query:  300 IPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSEIDELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGIDLLSKMLCMDPSRRITARSALEHEYFRDV 707
            +PVRT+THEVVTLWYRAPEILLG ++YST VD+WS+GCIFAEMV +R LFPGDSEID+LF+IFR LGTP+E  WPGVTS+PD+K +FPKW  ++   VV  L+  G  LLS+ML  DP++RI+A++AL H +F+DV
Sbjct:  154 VPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDV 289          
BLAST of CX043372 vs. ExPASy Swiss-Prot
Match: CDK2_MESAU (Cell division protein kinase 2 OS=Mesocricetus auratus GN=CDK2 PE=2 SV=1)

HSP 1 Score: 197.208 bits (500), Expect = 7.186e-50
Identity = 89/136 (65.44%), Postives = 113/136 (83.09%), Query Frame = -3
Query:  300 IPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSEIDELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGIDLLSKMLCMDPSRRITARSALEHEYFRDV 707
            +PVRT+THEVVTLWYRAPEILLG ++YST VD+WS+GCIFAEMV +R LFPGDSEID+LF+IFR LGTP+E  WPGVTS+PD+K +FPKW  ++   VV  L+  G  LLS+ML  DP++RI+A++AL H +F+DV
Sbjct:  154 VPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDV 289          
BLAST of CX043372 vs. ExPASy Swiss-Prot
Match: CDK2_HUMAN (Cell division protein kinase 2 OS=Homo sapiens GN=CDK2 PE=1 SV=2)

HSP 1 Score: 197.208 bits (500), Expect = 7.186e-50
Identity = 89/136 (65.44%), Postives = 113/136 (83.09%), Query Frame = -3
Query:  300 IPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSEIDELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGIDLLSKMLCMDPSRRITARSALEHEYFRDV 707
            +PVRT+THEVVTLWYRAPEILLG ++YST VD+WS+GCIFAEMV +R LFPGDSEID+LF+IFR LGTP+E  WPGVTS+PD+K +FPKW  ++   VV  L+  G  LLS+ML  DP++RI+A++AL H +F+DV
Sbjct:  154 VPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDV 289          
BLAST of CX043372 vs. ExPASy Swiss-Prot
Match: CDK2_CRIGR (Cell division protein kinase 2 OS=Cricetulus griseus GN=CDK2 PE=2 SV=1)

HSP 1 Score: 197.208 bits (500), Expect = 7.186e-50
Identity = 89/136 (65.44%), Postives = 113/136 (83.09%), Query Frame = -3
Query:  300 IPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSEIDELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGIDLLSKMLCMDPSRRITARSALEHEYFRDV 707
            +PVRT+THEVVTLWYRAPEILLG ++YST VD+WS+GCIFAEMV +R LFPGDSEID+LF+IFR LGTP+E  WPGVTS+PD+K +FPKW  ++   VV  L+  G  LLS+ML  DP++RI+A++AL H +F+DV
Sbjct:  154 VPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDV 289          
The following BLAST results are available for this feature:
BLAST of CX043372 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CDKA1_ARATH1.649e-6277.86Cyclin-dependent kinase A-1 OS=Arabidopsis thalian... [more]
CDK3_HUMAN1.399e-5365.99Cell division protein kinase 3 OS=Homo sapiens GN=... [more]
CDC28_CANAL1.310e-5168.15Cell division control protein 28 OS=Candida albica... [more]
CDK2_CARAU4.976e-5165.44Cell division protein kinase 2 OS=Carassius auratu... [more]
CDC2_SCHPO1.448e-5066.67Cell division control protein 2 OS=Schizosaccharom... [more]
CDC2_CARAU2.470e-5064.23Cell division control protein 2 homolog OS=Carassi... [more]
CDK2_RAT7.186e-5065.44Cell division protein kinase 2 OS=Rattus norvegicu... [more]
CDK2_MESAU7.186e-5065.44Cell division protein kinase 2 OS=Mesocricetus aur... [more]
CDK2_HUMAN7.186e-5065.44Cell division protein kinase 2 OS=Homo sapiens GN=... [more]
CDK2_CRIGR7.186e-5065.44Cell division protein kinase 2 OS=Cricetulus grise... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS07_10F05_b Parent Washington Navel Orange Thrip-Challenged Flavedo cDNA Library UCRCS07 Citrus sinensis cDNA clone UCRCS07-10F05-L10-1-7.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX043372 ID=CX043372; Name=CX043372; organism=Citrus sinensis; type=EST; length=709bp
TTTTTTTTTTTTTTTTTGAGTAATCGAACAACAAATTCAATTTGGTGTAT
TGCATATCAAATATTTAAAAGAAAAACTGGCACAAGCATTTATCCACAAG
ATCAAGAAAGCCGCGAATACACGATTACAAACTAGGCAAATCCAGAGATG
ACTGTAAAAAGCCATTCCATGTAGTAAGACTTTTCAGTAAAACTGCAAGT
AAAGACAGTCGGCAAATTTCGCAAACAATCAAAACCAAAGGCTTCACAAT
AATGTCAACACTCTAATAGCATATACAACAGATATTAGGGTACAAATTCG
ACGTCCCTGAAGTATTCATGTTCTAGAGCACTTCTGGCAGTAATTCTTCT
GCTTGGATCCATGCAGAGCATTTTAGAAAGGAGATCAATGCCAGCTGGCT
CAAGATTTCGAACAACAGTCCCCAACTCCTTAGAAGGCCATTTAGGAAAG
GCAGATTTAAAGTCAGGCAATGAAGTCACTCCGGGCCATGTGTCCTCATT
AGGTGTTCCCAAGACTCTGAAGATCTTGAATAACTCATCAATCTCAGAGT
CTCCTGGAAACAATGGCCGCTGGTTCACCATCTCAGCAAATATACATCCC
ACCGACCACACATCAACTGGAGTAGAGTAATGGCGAGATCCTAGTAATAT
TTCAGGTGCTCTGTACCACAATGTCACCACCTCATGTGTAAATGTCCTAA
CAGGAATAC
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