CX043372

Overview
NameCX043372
Unique NameCX043372
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length709
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX043372 vs. ExPASy Swiss-Prot
Match: CDK3_MOUSE (Cell division protein kinase 3 OS=Mus musculus GN=Cdk3 PE=1 SV=2)

HSP 1 Score: 186.808 bits (473), Expect = 9.712e-47
Identity = 87/133 (65.41%), Postives = 110/133 (82.71%), Query Frame = -3
Query:  309 IPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSEIDELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGIDLLSKMLCMDPSRRITARSALEHEYF 707
            +P+RT+THEVVTLWYRAPEILLGS+ YST VD+ S+GCIFAEMV  + LFPGDSEID+LF+IFR LGTP+E TWPGV+ +PD++S+FPKW  K L  +V +L P G DLL ++L  DPS+RI+A++AL H YF
Sbjct:  154 VPLRTYTHEVVTLWYRAPEILLGSKFYSTAVDI-SIGCIFAEMVTGKALFPGDSEIDQLFRIFRTLGTPSEATWPGVSQMPDYQSSFPKWSRKGLEEIVPSLGPEGKDLLLRLLQYDPSQRISAKTALAHPYF 285          
BLAST of CX043372 vs. ExPASy Swiss-Prot
Match: CDC2H_PLAVI (Cell division control protein 2 homolog OS=Plasmodium vivax GN=CRK2 PE=3 SV=1)

HSP 1 Score: 186.037 bits (471), Expect = 1.657e-46
Identity = 85/135 (62.96%), Postives = 106/135 (78.52%), Query Frame = -3
Query:  303 IPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSEIDELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGIDLLSKMLCMDPSRRITARSALEHEYFRD 707
            IPVR +THEVVTLWYRAP+IL+GS+ YSTP+D+WSVGCIFAEMVN RPLFPG SE D+L +IFR+LGTPN + WP VT LP +   F  +      T ++ L+  GIDLLSKML +DP++RITA+ ALEH YF++
Sbjct:  152 IPVRKYTHEVVTLWYRAPDILMGSKKYSTPIDMWSVGCIFAEMVNGRPLFPGVSETDQLMRIFRILGTPNSENWPNVTELPKYDPDFMVYEPLPWETFLKGLDDTGIDLLSKMLRLDPNQRITAKQALEHAYFKE 286          
BLAST of CX043372 vs. ExPASy Swiss-Prot
Match: CDC2_RANDY (Cell division control protein 2 homolog OS=Rana dybowskii GN=CDC2 PE=2 SV=1)

HSP 1 Score: 185.652 bits (470), Expect = 2.164e-46
Identity = 84/137 (61.31%), Postives = 107/137 (78.10%), Query Frame = -3
Query:  297 IPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSEIDELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGIDLLSKMLCMDPSRRITARSALEHEYFRDVE 707
            IPVR +THEVVTLWYRAPE+LLGS  YSTPVDVWS+G IFAE+ +++PLF GDSEID+LF+I  + GTPN + WP V SL D+K+ FPKW    L   V+N++  G+DLL+KML  DP++RI+AR AL H YF D++
Sbjct:  155 IPVRVYTHEVVTLWYRAPEVLLGSVRYSTPVDVWSIGTIFAEIASKKPLFHGDSEIDQLFRISELWGTPNNEVWPEVESLQDYKNTFPKWKGGSLAANVKNIDKEGLDLLAKMLVYDPAKRISARKALLHPYFDDLD 291          
BLAST of CX043372 vs. ExPASy Swiss-Prot
Match: CDC2H_PLAYO (Cell division control protein 2 homolog OS=Plasmodium yoelii yoelii GN=CRK2 PE=3 SV=1)

HSP 1 Score: 183.726 bits (465), Expect = 8.221e-46
Identity = 82/135 (60.74%), Postives = 104/135 (77.04%), Query Frame = -3
Query:  303 IPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSEIDELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGIDLLSKMLCMDPSRRITARSALEHEYFRD 707
            IP R +THEVVTLWYRAP+IL+GS+ YSTP+D+WSVGCIFAEMVN RPLFPG SE D+L +IF++LGTPN   WP V  LP +   FP +      T ++ L+  GIDLLSKML +DP++RITA+ A+EH YF++
Sbjct:  153 IPARRYTHEVVTLWYRAPDILMGSKKYSTPIDIWSVGCIFAEMVNGRPLFPGVSETDQLMRIFKILGTPNSQNWPDVFKLPKYDPNFPVYEPLPWETFIKGLDDTGIDLLSKMLKLDPNQRITAKQAIEHPYFKE 287          
BLAST of CX043372 vs. ExPASy Swiss-Prot
Match: CDC2H_PLAKH (Cell division control protein 2 homolog OS=Plasmodium knowlesi (strain H) GN=CRK2 PE=3 SV=1)

HSP 1 Score: 183.726 bits (465), Expect = 8.221e-46
Identity = 84/135 (62.22%), Postives = 105/135 (77.78%), Query Frame = -3
Query:  303 IPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSEIDELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGIDLLSKMLCMDPSRRITARSALEHEYFRD 707
            IPVR +THEVVTLWYRAP+IL+GS+ YSTP+D+WSVGCIFAEMVN RPLFPG SE D+L +IFR+LGTPN   WP VT LP +   F  +      T ++ L+  GIDLLSKML +DP++RITA+ AL+H YF++
Sbjct:  152 IPVRKYTHEVVTLWYRAPDILMGSKKYSTPIDIWSVGCIFAEMVNGRPLFPGVSETDQLMRIFRILGTPNSANWPSVTELPKYDPDFIVYEPLPWETFLKGLDDTGIDLLSKMLRLDPNQRITAKEALQHAYFKE 286          
BLAST of CX043372 vs. ExPASy Swiss-Prot
Match: CDC2H_PLABA (Cell division control protein 2 homolog OS=Plasmodium berghei (strain Anka) GN=CRK2 PE=2 SV=1)

HSP 1 Score: 183.726 bits (465), Expect = 8.221e-46
Identity = 82/135 (60.74%), Postives = 104/135 (77.04%), Query Frame = -3
Query:  303 IPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSEIDELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGIDLLSKMLCMDPSRRITARSALEHEYFRD 707
            IP R +THEVVTLWYRAP+IL+GS+ YSTP+D+WSVGCIFAEMVN RPLFPG SE D+L +IF++LGTPN   WP V  LP +   FP +      T ++ L+  GIDLLSKML +DP++RITA+ A+EH YF++
Sbjct:  152 IPARRYTHEVVTLWYRAPDILMGSKKYSTPIDIWSVGCIFAEMVNGRPLFPGASETDQLMRIFKILGTPNSQNWPDVFKLPKYDPNFPVYNPLPWETFIKGLDDTGIDLLSKMLKLDPNQRITAKQAIEHPYFKE 286          
BLAST of CX043372 vs. ExPASy Swiss-Prot
Match: CDC2H_PLACH (Cell division control protein 2 homolog OS=Plasmodium chabaudi GN=CRK2 PE=3 SV=1)

HSP 1 Score: 182.57 bits (462), Expect = 1.832e-45
Identity = 81/135 (60.00%), Postives = 104/135 (77.04%), Query Frame = -3
Query:  303 IPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSEIDELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGIDLLSKMLCMDPSRRITARSALEHEYFRD 707
            IP R +THEVVTLWYRAP+IL+GS+ YSTP+D+WSVGCIFAEMVN RPLFPG S+ D+L +IF++LGTPN   WP V  LP +   FP +      T ++ L+  GIDLLSKML +DP++RITA+ A+EH YF++
Sbjct:  152 IPARRYTHEVVTLWYRAPDILMGSKKYSTPIDIWSVGCIFAEMVNGRPLFPGVSDTDQLMRIFKILGTPNSQNWPDVFKLPKYDPNFPVYEPLPWETFIKGLDDTGIDLLSKMLKLDPNQRITAKQAIEHPYFKE 286          
BLAST of CX043372 vs. ExPASy Swiss-Prot
Match: CDC2C_DROME (Cell division control protein 2 cognate OS=Drosophila melanogaster GN=cdc2c PE=1 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 3.124e-45
Identity = 81/139 (58.27%), Postives = 107/139 (76.98%), Query Frame = -3
Query:  291 IPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSEIDELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGIDLLSKMLCMDPSRRITARSALEHEYFRDVEFV 707
            +P+R +THEVVTLWYRAPEILLG++ YST VD+WS+GCIF+EM+ +R LFPGDSEID+L++IFR L TP+E  WPGVT LPDFK+ FP+W    +   +   E    +L+  MLC DP+ RI+A+ AL+H YFR+V+ V
Sbjct:  157 VPMRAYTHEVVTLWYRAPEILLGTKFYSTGVDIWSLGCIFSEMIMRRSLFPGDSEIDQLYRIFRTLSTPDETNWPGVTQLPDFKTKFPRWEGTNMPQPI--TEHEAHELIMSMLCYDPNLRISAKDALQHAYFRNVQHV 293          
BLAST of CX043372 vs. ExPASy Swiss-Prot
Match: CKB11_ORYSJ (Cyclin-dependent kinase B1-1 OS=Oryza sativa subsp. japonica GN=CDKB1-1 PE=2 SV=1)

HSP 1 Score: 181.415 bits (459), Expect = 4.080e-45
Identity = 82/137 (59.85%), Postives = 109/137 (79.56%), Query Frame = -3
Query:  297 IPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSEIDELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGIDLLSKMLCMDPSRRITARSALEHEYFRDVE 707
            +P++++THE+VTLWYRAPE+LLGS HYST VD+WSVGCIFAEMV ++ LFPGDSE+ +L  IFR+LGTP E+ WPGVT L D+   FP+W  + L   V +LEP G+DLLSKML  +P+ RI+A++A+EH YF  ++
Sbjct:  164 VPMKSYTHEIVTLWYRAPEVLLGSTHYSTGVDIWSVGCIFAEMVRRQALFPGDSELQQLLHIFRLLGTPTEEQWPGVTDLRDWHE-FPQWKPQILERQVPSLEPEGVDLLSKMLQYNPANRISAKAAMEHPYFDSLD 299          
BLAST of CX043372 vs. ExPASy Swiss-Prot
Match: CDC2H_PLAFK (Cell division control protein 2 homolog OS=Plasmodium falciparum (isolate K1 / Thailand) GN=CRK2 PE=1 SV=1)

HSP 1 Score: 179.104 bits (453), Expect = 2.025e-44
Identity = 81/135 (60.00%), Postives = 104/135 (77.04%), Query Frame = -3
Query:  303 IPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSEIDELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGIDLLSKMLCMDPSRRITARSALEHEYFRD 707
            IPVR +THEVVTLWYRAP++L+GS+ YST +D+WSVGCIFAEMVN  PLFPG SE D+L +IFR+LGTPN   WP VT LP +   F  +      + ++ L+ +GIDLLSKML +DP++RITA+ ALEH YF++
Sbjct:  152 IPVRKYTHEVVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYFKE 286          
The following BLAST results are available for this feature:
BLAST of CX043372 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CDK3_MOUSE9.712e-4765.41Cell division protein kinase 3 OS=Mus musculus GN=... [more]
CDC2H_PLAVI1.657e-4662.96Cell division control protein 2 homolog OS=Plasmod... [more]
CDC2_RANDY2.164e-4661.31Cell division control protein 2 homolog OS=Rana dy... [more]
CDC2H_PLAYO8.221e-4660.74Cell division control protein 2 homolog OS=Plasmod... [more]
CDC2H_PLAKH8.221e-4662.22Cell division control protein 2 homolog OS=Plasmod... [more]
CDC2H_PLABA8.221e-4660.74Cell division control protein 2 homolog OS=Plasmod... [more]
CDC2H_PLACH1.832e-4560.00Cell division control protein 2 homolog OS=Plasmod... [more]
CDC2C_DROME3.124e-4558.27Cell division control protein 2 cognate OS=Drosoph... [more]
CKB11_ORYSJ4.080e-4559.85Cyclin-dependent kinase B1-1 OS=Oryza sativa subsp... [more]
CDC2H_PLAFK2.025e-4460.00Cell division control protein 2 homolog OS=Plasmod... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS07_10F05_b Parent Washington Navel Orange Thrip-Challenged Flavedo cDNA Library UCRCS07 Citrus sinensis cDNA clone UCRCS07-10F05-L10-1-7.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX043372 ID=CX043372; Name=CX043372; organism=Citrus sinensis; type=EST; length=709bp
TTTTTTTTTTTTTTTTTGAGTAATCGAACAACAAATTCAATTTGGTGTAT
TGCATATCAAATATTTAAAAGAAAAACTGGCACAAGCATTTATCCACAAG
ATCAAGAAAGCCGCGAATACACGATTACAAACTAGGCAAATCCAGAGATG
ACTGTAAAAAGCCATTCCATGTAGTAAGACTTTTCAGTAAAACTGCAAGT
AAAGACAGTCGGCAAATTTCGCAAACAATCAAAACCAAAGGCTTCACAAT
AATGTCAACACTCTAATAGCATATACAACAGATATTAGGGTACAAATTCG
ACGTCCCTGAAGTATTCATGTTCTAGAGCACTTCTGGCAGTAATTCTTCT
GCTTGGATCCATGCAGAGCATTTTAGAAAGGAGATCAATGCCAGCTGGCT
CAAGATTTCGAACAACAGTCCCCAACTCCTTAGAAGGCCATTTAGGAAAG
GCAGATTTAAAGTCAGGCAATGAAGTCACTCCGGGCCATGTGTCCTCATT
AGGTGTTCCCAAGACTCTGAAGATCTTGAATAACTCATCAATCTCAGAGT
CTCCTGGAAACAATGGCCGCTGGTTCACCATCTCAGCAAATATACATCCC
ACCGACCACACATCAACTGGAGTAGAGTAATGGCGAGATCCTAGTAATAT
TTCAGGTGCTCTGTACCACAATGTCACCACCTCATGTGTAAATGTCCTAA
CAGGAATAC
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