CX043372

Overview
NameCX043372
Unique NameCX043372
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length709
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX043372 vs. ExPASy Swiss-Prot
Match: MK09_RAT (Mitogen-activated protein kinase 9 OS=Rattus norvegicus GN=Mapk9 PE=1 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.368e-16
Identity = 55/145 (37.93%), Postives = 73/145 (50.34%), Query Frame = -3
Query:  312 THEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSEIDELFKIFRVLGTP-----------------NEDTWPGVTSLPDFKSAFPKW--PSKELGTVVRNLEPAGIDLLSKMLCMDPSRRITARSALEHEY 689
            T  VVT +YRAPE++LG   Y   VD+WSVGCI  E+V    +F G   ID+  K+   LGTP                 N   +PG+     F+  FP W  PS+     ++  +    DLLSKML +DP +RI+   AL H Y
Sbjct:  183 TPYVVTRYYRAPEVILGMG-YKENVDIWSVGCIMGELVKGCVIFQGTDHIDQWNKVIEQLGTPSAEFMKKLQPTVRNYVENRPKYPGI----KFEELFPDWIFPSESERDKIKTSQAR--DLLSKMLVIDPDKRISVDEALRHPY 320          
BLAST of CX043372 vs. ExPASy Swiss-Prot
Match: MK09_HUMAN (Mitogen-activated protein kinase 9 OS=Homo sapiens GN=MAPK9 PE=1 SV=2)

HSP 1 Score: 86.6557 bits (213), Expect = 1.368e-16
Identity = 55/145 (37.93%), Postives = 73/145 (50.34%), Query Frame = -3
Query:  312 THEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSEIDELFKIFRVLGTP-----------------NEDTWPGVTSLPDFKSAFPKW--PSKELGTVVRNLEPAGIDLLSKMLCMDPSRRITARSALEHEY 689
            T  VVT +YRAPE++LG   Y   VD+WSVGCI  E+V    +F G   ID+  K+   LGTP                 N   +PG+     F+  FP W  PS+     ++  +    DLLSKML +DP +RI+   AL H Y
Sbjct:  183 TPYVVTRYYRAPEVILGMG-YKENVDIWSVGCIMGELVKGCVIFQGTDHIDQWNKVIEQLGTPSAEFMKKLQPTVRNYVENRPKYPGI----KFEELFPDWIFPSESERDKIKTSQAR--DLLSKMLVIDPDKRISVDEALRHPY 320          
BLAST of CX043372 vs. ExPASy Swiss-Prot
Match: MK08A_CYPCA (Mitogen-activated protein kinase 8A OS=Cyprinus carpio GN=mapk8a PE=2 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.368e-16
Identity = 57/141 (40.43%), Postives = 76/141 (53.90%), Query Frame = -3
Query:  312 THEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSEIDELFKIFRVLGTP--------NEDTWPGVTSLP-----DFKSAFPK--WPSKELGTVVRNLEPAGIDLLSKMLCMDPSRRITARSALEHEY 689
            T  VVT +YRAPE++LG   Y   VD+WSVGCI AEMV  + LFPG   ID+  K+   LGTP        N+     V + P      F+  FP   +P+      ++  +    DLLSKML +D S+RI+   AL+H Y
Sbjct:  183 TPYVVTRYYRAPEVILGMG-YQANVDIWSVGCILAEMVRHKILFPGRDYIDQWNKVIEQLGTPTQEFMMKLNQSVRTYVENRPRYTGYSFEKLFPDVLFPADSEHNKLKASQAR--DLLSKMLVIDASKRISVEEALQHPY 320          
BLAST of CX043372 vs. ExPASy Swiss-Prot
Match: JNK_SUBDO (Stress-activated protein kinase JNK OS=Suberites domuncula GN=JNK PE=2 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.368e-16
Identity = 57/139 (41.01%), Postives = 72/139 (51.80%), Query Frame = -3
Query:  312 THEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSEIDELFKIFRVLGTPNEDTWPGVTSLPDF------KSAFPKWPSKELGTVVRNLEPA-------GIDLLSKMLCMDPSRRITARSALEHEY 689
            T  VVT +YRAPE+++G + Y   VD+WSVGCIFAEM+    L PG   ID+  K+ +VLGTP    +  ++S          + A   W       V  N  P        G DLLSKML +DP  RIT   AL H Y
Sbjct:  179 TPYVVTRYYRAPEVIVGMK-YKENVDIWSVGCIFAEMIRGDILLPGKDYIDQWNKVTQVLGTPPSVFFKQLSSSVRLYCESQPRYAGKSWKDLFPDDVFPNDTPEDKAKTRHGRDLLSKMLQIDPQNRITVEQALAHPY 316          
BLAST of CX043372 vs. ExPASy Swiss-Prot
Match: GSK3A_RAT (Glycogen synthase kinase-3 alpha OS=Rattus norvegicus GN=Gsk3a PE=1 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.368e-16
Identity = 45/129 (34.88%), Postives = 77/129 (59.69%), Query Frame = -3
Query:  300 VVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSEIDELFKIFRVLGTPNEDTWPGVT-SLPDFKSAFPKWPSKELGTVVRN-LEPAGIDLLSKMLCMDPSRRITARSALEHEYFRDV 680
            + + +YRAPE++ G+  Y++ +DVWS GC+ AE++  +P+FPGDS +D+L +I +VLGTP  +    +  +  +FK  FP+  +     V ++   P  I L S +L   PS R++   A  H +F ++
Sbjct:  280 ICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFK--FPQIKAHPWTKVFKSRTPPEAIALCSSLLEYTPSSRLSPLEACAHSFFDEL 406          
BLAST of CX043372 vs. ExPASy Swiss-Prot
Match: GSK3A_MOUSE (Glycogen synthase kinase-3 alpha OS=Mus musculus GN=Gsk3a PE=1 SV=2)

HSP 1 Score: 86.6557 bits (213), Expect = 1.368e-16
Identity = 45/130 (34.62%), Postives = 78/130 (60.00%), Query Frame = -3
Query:  300 VVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSEIDELFKIFRVLGTPNEDTWPGVT-SLPDFKSAFPKWPSKELGTVVRNLE--PAGIDLLSKMLCMDPSRRITARSALEHEYFRDV 680
            + + +YRAPE++ G+  Y++ +DVWS GC+ AE++  +P+FPGDS +D+L +I +VLGTP  +    +  +  +FK  FP+  +     V ++ +  P  I L S +L   PS R++   A  H +F ++
Sbjct:  280 ICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFK--FPQIKAHPWTKVFKSSKTPPEAIALCSSLLEYTPSSRLSPLEACAHSFFDEL 407          
BLAST of CX043372 vs. ExPASy Swiss-Prot
Match: GSK3A_HUMAN (Glycogen synthase kinase-3 alpha OS=Homo sapiens GN=GSK3A PE=1 SV=2)

HSP 1 Score: 86.6557 bits (213), Expect = 1.368e-16
Identity = 45/129 (34.88%), Postives = 77/129 (59.69%), Query Frame = -3
Query:  300 VVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSEIDELFKIFRVLGTPNEDTWPGVT-SLPDFKSAFPKWPSKELGTVVRN-LEPAGIDLLSKMLCMDPSRRITARSALEHEYFRDV 680
            + + +YRAPE++ G+  Y++ +DVWS GC+ AE++  +P+FPGDS +D+L +I +VLGTP  +    +  +  +FK  FP+  +     V ++   P  I L S +L   PS R++   A  H +F ++
Sbjct:  280 ICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFK--FPQIKAHPWTKVFKSRTPPEAIALCSSLLEYTPSSRLSPLEACAHSFFDEL 406          
BLAST of CX043372 vs. ExPASy Swiss-Prot
Match: CDKL2_MOUSE (Cyclin-dependent kinase-like 2 OS=Mus musculus GN=Cdkl2 PE=2 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.368e-16
Identity = 51/142 (35.92%), Postives = 73/142 (51.41%), Query Frame = -3
Query:  306 PVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSEIDELFKIFRVLGT---------PNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGIDLLSKMLCMDPSRRITARSALEHEYFR 704
            P   +T  V T WYRAPE+L+G   Y   VD+W++GC+  EM+  +PLFPG+S+ID+L  I   LG               + GV  LP+ K A     ++ L +    L  A I L  K L +DP +R      L H++F+
Sbjct:  154 PGEVYTDYVATRWYRAPELLVGDVKYGKAVDIWAIGCLVIEMLMGQPLFPGESDIDQLHHIMTCLGNLIPRHQELFYKNPVFAGV-RLPEVKDA----EAEPLESRYPKLPEAVISLAKKCLHIDPDKRPFCADLLRHDFFQ 290          
BLAST of CX043372 vs. ExPASy Swiss-Prot
Match: MK08B_CYPCA (Mitogen-activated protein kinase 8B OS=Cyprinus carpio GN=mapk8b PE=2 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 1.786e-16
Identity = 58/141 (41.13%), Postives = 75/141 (53.19%), Query Frame = -3
Query:  312 THEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSEIDELFKIFRVLGTP--------NEDTWPGVTSLP-----DFKSAFPK--WPSKELGTVVRNLEPAGIDLLSKMLCMDPSRRITARSALEHEY 689
            T  VVT +YRAPE++LG   Y   VDVWSVGCI AEMV    LFPG   ID+  K+   LGTP        N+     V + P      F+  FP   +P+      ++  +    DLLSKML +D S+RI+   AL+H Y
Sbjct:  183 TPYVVTRYYRAPEVILGMG-YQANVDVWSVGCIMAEMVRGSVLFPGSDHIDQWNKVIEQLGTPSQEFMMKLNQSVRTYVENRPRYTGYSFEKLFPDVLFPADSEHNKLKASQAR--DLLSKMLVIDASKRISVDEALQHPY 320          
BLAST of CX043372 vs. ExPASy Swiss-Prot
Match: MK09_CHICK (Mitogen-activated protein kinase 9 OS=Gallus gallus GN=MAPK9 PE=2 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 3.047e-16
Identity = 55/145 (37.93%), Postives = 73/145 (50.34%), Query Frame = -3
Query:  312 THEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSEIDELFKIFRVLGTP-----------------NEDTWPGVTSLPDFKSAFPKW--PSKELGTVVRNLEPAGIDLLSKMLCMDPSRRITARSALEHEY 689
            T  VVT +YRAPE++LG   Y   VD+WSVGCI  E+V    +F G   ID+  K+   LGTP                 N   +PG+     F+  FP W  PS+     ++  +    DLLSKML +DP +RI+   AL H Y
Sbjct:  183 TPYVVTRYYRAPEVILGMG-YKENVDIWSVGCIMGELVKGCVIFQGTDHIDQWNKVIEQLGTPSAEFMKKLQPTVRNYVENRPKYPGI----KFEELFPDWIFPSESDRDKLKTSQAR--DLLSKMLVVDPDKRISVDEALRHPY 320          
The following BLAST results are available for this feature:
BLAST of CX043372 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
MK09_RAT1.368e-1637.93Mitogen-activated protein kinase 9 OS=Rattus norve... [more]
MK09_HUMAN1.368e-1637.93Mitogen-activated protein kinase 9 OS=Homo sapiens... [more]
MK08A_CYPCA1.368e-1640.43Mitogen-activated protein kinase 8A OS=Cyprinus ca... [more]
JNK_SUBDO1.368e-1641.01Stress-activated protein kinase JNK OS=Suberites d... [more]
GSK3A_RAT1.368e-1634.88Glycogen synthase kinase-3 alpha OS=Rattus norvegi... [more]
GSK3A_MOUSE1.368e-1634.62Glycogen synthase kinase-3 alpha OS=Mus musculus G... [more]
GSK3A_HUMAN1.368e-1634.88Glycogen synthase kinase-3 alpha OS=Homo sapiens G... [more]
CDKL2_MOUSE1.368e-1635.92Cyclin-dependent kinase-like 2 OS=Mus musculus GN=... [more]
MK08B_CYPCA1.786e-1641.13Mitogen-activated protein kinase 8B OS=Cyprinus ca... [more]
MK09_CHICK3.047e-1637.93Mitogen-activated protein kinase 9 OS=Gallus gallu... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS07_10F05_b Parent Washington Navel Orange Thrip-Challenged Flavedo cDNA Library UCRCS07 Citrus sinensis cDNA clone UCRCS07-10F05-L10-1-7.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX043372 ID=CX043372; Name=CX043372; organism=Citrus sinensis; type=EST; length=709bp
TTTTTTTTTTTTTTTTTGAGTAATCGAACAACAAATTCAATTTGGTGTAT
TGCATATCAAATATTTAAAAGAAAAACTGGCACAAGCATTTATCCACAAG
ATCAAGAAAGCCGCGAATACACGATTACAAACTAGGCAAATCCAGAGATG
ACTGTAAAAAGCCATTCCATGTAGTAAGACTTTTCAGTAAAACTGCAAGT
AAAGACAGTCGGCAAATTTCGCAAACAATCAAAACCAAAGGCTTCACAAT
AATGTCAACACTCTAATAGCATATACAACAGATATTAGGGTACAAATTCG
ACGTCCCTGAAGTATTCATGTTCTAGAGCACTTCTGGCAGTAATTCTTCT
GCTTGGATCCATGCAGAGCATTTTAGAAAGGAGATCAATGCCAGCTGGCT
CAAGATTTCGAACAACAGTCCCCAACTCCTTAGAAGGCCATTTAGGAAAG
GCAGATTTAAAGTCAGGCAATGAAGTCACTCCGGGCCATGTGTCCTCATT
AGGTGTTCCCAAGACTCTGAAGATCTTGAATAACTCATCAATCTCAGAGT
CTCCTGGAAACAATGGCCGCTGGTTCACCATCTCAGCAAATATACATCCC
ACCGACCACACATCAACTGGAGTAGAGTAATGGCGAGATCCTAGTAATAT
TTCAGGTGCTCTGTACCACAATGTCACCACCTCATGTGTAAATGTCCTAA
CAGGAATAC
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