CX043372

Overview
NameCX043372
Unique NameCX043372
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length709
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX043372 vs. ExPASy Swiss-Prot
Match: CSK2A_DICDI (Casein kinase II subunit alpha OS=Dictyostelium discoideum GN=casK PE=2 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 7.505e-15
Identity = 48/142 (33.80%), Postives = 71/142 (50.00%), Query Frame = -3
Query:  306 PVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQR-PLFPGDSEIDELFKIFRVLGTPNEDTW---PGVTSLPDFKSAFPKWPSKELGTVVRN-----LEPAGIDLLSKMLCMDPSRRITARSALEHEYFR 704
            P + +   V +  Y+ PE+L+    Y   +D+WS+GC+FA M+ Q+ P F G   ID+L KI ++LGT     +    G+       S   K P K     +         P  ID L K+L  DP+ R+T R A+EH YF+
Sbjct:  192 PNQDYNVRVASRPYKGPELLVDMEDYDYSLDMWSLGCMFAGMLFQKDPFFHGHDNIDQLVKIVKILGTEEFYAYLDKYGIVVDHTILSIIGKHPKKPWSRFITKENQHLAVPEAIDFLEKLLRYDPAERLTTREAMEHPYFK 333          
BLAST of CX043372 vs. ExPASy Swiss-Prot
Match: MK08_XENLA (Mitogen-activated protein kinase 8 OS=Xenopus laevis GN=mapk8 PE=2 SV=2)

HSP 1 Score: 80.4925 bits (197), Expect = 9.802e-15
Identity = 55/141 (39.01%), Postives = 74/141 (52.48%), Query Frame = -3
Query:  312 THEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSEIDELFKIFRVLGTP----NEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPA-----------GIDLLSKMLCMDPSRRITARSALEHEY 689
            T  VVT +YRAPE++LG   Y   VD+WSVGCI  EM+    LFPG   ID+  K+   LGTP     +   P V +  + +  +  +  ++L   V  L PA             DLLSKML +D S+RI+   AL+H Y
Sbjct:  183 TPYVVTRYYRAPEVILGMG-YKENVDIWSVGCILGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCTEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDV--LFPADSEHNKLKASQARDLLSKMLVIDASKRISVDDALQHPY 320          
BLAST of CX043372 vs. ExPASy Swiss-Prot
Match: CSK2A_THEPA (Casein kinase II subunit alpha OS=Theileria parva GN=TP04_0659 PE=3 SV=2)

HSP 1 Score: 80.1073 bits (196), Expect = 1.280e-14
Identity = 44/145 (30.34%), Postives = 77/145 (53.10%), Query Frame = -3
Query:  297 PVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMV-NQRPLFPGDSEIDELFKIFRVLGTPNEDTW---PGVTSLPDFKSAFPKWPSKELGTVVRN-----LEPAGIDLLSKMLCMDPSRRITARSALEHEYFRDVE 704
            P + ++  V T +Y+ PE+L+  R+Y   +D+WS+GC+ A ++  + P F G    D+L KI +VLGT +   +    G+   P ++        K     V +     + P  +DLL +ML  D ++RIT   A+EH +F +++
Sbjct:  200 PEQEYSVRVATRYYKGPELLVDMRYYDYSLDIWSIGCMLAGIIFKKEPFFYGHDNYDQLVKIAKVLGTEDLHRYFEKYGLKFAPAYQEILGNHSKKPWTKFVHHENQHLVSPEVMDLLDRMLVYDHTKRITPLEAMEHPFFNEIK 344          
BLAST of CX043372 vs. ExPASy Swiss-Prot
Match: CSK2A_THEAN (Casein kinase II subunit alpha OS=Theileria annulata GN=TA10630 PE=3 SV=2)

HSP 1 Score: 80.1073 bits (196), Expect = 1.280e-14
Identity = 44/145 (30.34%), Postives = 77/145 (53.10%), Query Frame = -3
Query:  297 PVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMV-NQRPLFPGDSEIDELFKIFRVLGTPNEDTW---PGVTSLPDFKSAFPKWPSKELGTVVRN-----LEPAGIDLLSKMLCMDPSRRITARSALEHEYFRDVE 704
            P + ++  V T +Y+ PE+L+  R+Y   +D+WS+GC+ A ++  + P F G    D+L KI +VLGT +   +    G+   P ++        K     V +     + P  +DLL +ML  D ++RIT   A+EH +F +++
Sbjct:  200 PEQEYSVRVATRYYKGPELLVDMRYYDYSLDIWSIGCMLAGIIFKKEPFFYGHDNYDQLVKIAKVLGTEDLHRYFEKYGLKFAPAYQEILGNHSKKPWTKFVHHENQHLVSPEVMDLLDRMLVYDHTKRITPLEAMEHPFFNEIK 344          
BLAST of CX043372 vs. ExPASy Swiss-Prot
Match: MK08_MOUSE (Mitogen-activated protein kinase 8 OS=Mus musculus GN=Mapk8 PE=1 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.672e-14
Identity = 56/141 (39.72%), Postives = 75/141 (53.19%), Query Frame = -3
Query:  312 THEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSEIDELFKIFRVLGTP----NEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPA-----------GIDLLSKMLCMDPSRRITARSALEHEY 689
            T  VVT +YRAPE++LG   Y   VD+WSVGCI  EMV  + LFPG   ID+  K+   LGTP     +   P V +  + +  +  +  ++L   V  L PA             DLLSKML +D S+RI+   AL+H Y
Sbjct:  183 TPYVVTRYYRAPEVILGMG-YKENVDLWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDV--LFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPY 320          
BLAST of CX043372 vs. ExPASy Swiss-Prot
Match: MK08_HUMAN (Mitogen-activated protein kinase 8 OS=Homo sapiens GN=MAPK8 PE=1 SV=2)

HSP 1 Score: 79.7221 bits (195), Expect = 1.672e-14
Identity = 56/141 (39.72%), Postives = 75/141 (53.19%), Query Frame = -3
Query:  312 THEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSEIDELFKIFRVLGTP----NEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPA-----------GIDLLSKMLCMDPSRRITARSALEHEY 689
            T  VVT +YRAPE++LG   Y   VD+WSVGCI  EMV  + LFPG   ID+  K+   LGTP     +   P V +  + +  +  +  ++L   V  L PA             DLLSKML +D S+RI+   AL+H Y
Sbjct:  183 TPYVVTRYYRAPEVILGMG-YKENVDLWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDV--LFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPY 320          
BLAST of CX043372 vs. ExPASy Swiss-Prot
Match: MK08_RAT (Mitogen-activated protein kinase 8 OS=Rattus norvegicus GN=Mapk8 PE=1 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 2.852e-14
Identity = 56/141 (39.72%), Postives = 75/141 (53.19%), Query Frame = -3
Query:  312 THEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSEIDELFKIFRVLGTP----NEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPA-----------GIDLLSKMLCMDPSRRITARSALEHEY 689
            T  VVT +YRAPE++LG   Y   VD+WSVGCI  EMV  + LFPG   ID+  K+   LGTP     +   P V +  + +  +  +  ++L   V  L PA             DLLSKML +D S+RI+   AL+H Y
Sbjct:  183 TPYVVTRYYRAPEVILGMG-YKENVDLWSVGCIMGEMVCLKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDV--LFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPY 320          
BLAST of CX043372 vs. ExPASy Swiss-Prot
Match: MK06_RAT (Mitogen-activated protein kinase 6 OS=Rattus norvegicus GN=Mapk6 PE=2 SV=2)

HSP 1 Score: 78.9518 bits (193), Expect = 2.852e-14
Identity = 41/130 (31.54%), Postives = 68/130 (52.31%), Query Frame = -3
Query:  294 VVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSEIDELFKIFRVLGTPNEDTWPGVTS-LPDFKSAFPKWPSKELGTVVRNLEPAGIDLLSKMLCMDPSRRITARSALEHEYFRDVEF 680
            +VT WYR+P +LL   +Y+  +D+W+ GCIFAEM+  + LF G  E++++  I   +   +E+    + S +P +       P K L  ++  +    +D L ++L   P  R+TA  AL H Y     F
Sbjct:  192 LVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQMQLILESIPVVHEEDRQELLSVIPVYIRNDMTEPHKPLTQLLPGISREALDFLEQILTFSPMDRLTAEEALSHPYMSIYSF 321          
BLAST of CX043372 vs. ExPASy Swiss-Prot
Match: MK06_PONAB (Mitogen-activated protein kinase 6 OS=Pongo abelii GN=MAPK6 PE=2 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 2.852e-14
Identity = 41/130 (31.54%), Postives = 68/130 (52.31%), Query Frame = -3
Query:  294 VVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSEIDELFKIFRVLGTPNEDTWPGVTS-LPDFKSAFPKWPSKELGTVVRNLEPAGIDLLSKMLCMDPSRRITARSALEHEYFRDVEF 680
            +VT WYR+P +LL   +Y+  +D+W+ GCIFAEM+  + LF G  E++++  I   +   +E+    + S +P +       P K L  ++  +    +D L ++L   P  R+TA  AL H Y     F
Sbjct:  192 LVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQMQLILESIPVVHEEDRQELLSVIPVYIRNDMTEPHKPLTQLLPGISREALDFLEQILTFSPMDRLTAEEALSHPYMSIYSF 321          
BLAST of CX043372 vs. ExPASy Swiss-Prot
Match: MK06_HUMAN (Mitogen-activated protein kinase 6 OS=Homo sapiens GN=MAPK6 PE=1 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 2.852e-14
Identity = 41/130 (31.54%), Postives = 68/130 (52.31%), Query Frame = -3
Query:  294 VVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSEIDELFKIFRVLGTPNEDTWPGVTS-LPDFKSAFPKWPSKELGTVVRNLEPAGIDLLSKMLCMDPSRRITARSALEHEYFRDVEF 680
            +VT WYR+P +LL   +Y+  +D+W+ GCIFAEM+  + LF G  E++++  I   +   +E+    + S +P +       P K L  ++  +    +D L ++L   P  R+TA  AL H Y     F
Sbjct:  192 LVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQMQLILESIPVVHEEDRQELLSVIPVYIRNDMTEPHKPLTQLLPGISREALDFLEQILTFSPMDRLTAEEALSHPYMSIYSF 321          
The following BLAST results are available for this feature:
BLAST of CX043372 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CSK2A_DICDI7.505e-1533.80Casein kinase II subunit alpha OS=Dictyostelium di... [more]
MK08_XENLA9.802e-1539.01Mitogen-activated protein kinase 8 OS=Xenopus laev... [more]
CSK2A_THEPA1.280e-1430.34Casein kinase II subunit alpha OS=Theileria parva ... [more]
CSK2A_THEAN1.280e-1430.34Casein kinase II subunit alpha OS=Theileria annula... [more]
MK08_MOUSE1.672e-1439.72Mitogen-activated protein kinase 8 OS=Mus musculus... [more]
MK08_HUMAN1.672e-1439.72Mitogen-activated protein kinase 8 OS=Homo sapiens... [more]
MK08_RAT2.852e-1439.72Mitogen-activated protein kinase 8 OS=Rattus norve... [more]
MK06_RAT2.852e-1431.54Mitogen-activated protein kinase 6 OS=Rattus norve... [more]
MK06_PONAB2.852e-1431.54Mitogen-activated protein kinase 6 OS=Pongo abelii... [more]
MK06_HUMAN2.852e-1431.54Mitogen-activated protein kinase 6 OS=Homo sapiens... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS07_10F05_b Parent Washington Navel Orange Thrip-Challenged Flavedo cDNA Library UCRCS07 Citrus sinensis cDNA clone UCRCS07-10F05-L10-1-7.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX043372 ID=CX043372; Name=CX043372; organism=Citrus sinensis; type=EST; length=709bp
TTTTTTTTTTTTTTTTTGAGTAATCGAACAACAAATTCAATTTGGTGTAT
TGCATATCAAATATTTAAAAGAAAAACTGGCACAAGCATTTATCCACAAG
ATCAAGAAAGCCGCGAATACACGATTACAAACTAGGCAAATCCAGAGATG
ACTGTAAAAAGCCATTCCATGTAGTAAGACTTTTCAGTAAAACTGCAAGT
AAAGACAGTCGGCAAATTTCGCAAACAATCAAAACCAAAGGCTTCACAAT
AATGTCAACACTCTAATAGCATATACAACAGATATTAGGGTACAAATTCG
ACGTCCCTGAAGTATTCATGTTCTAGAGCACTTCTGGCAGTAATTCTTCT
GCTTGGATCCATGCAGAGCATTTTAGAAAGGAGATCAATGCCAGCTGGCT
CAAGATTTCGAACAACAGTCCCCAACTCCTTAGAAGGCCATTTAGGAAAG
GCAGATTTAAAGTCAGGCAATGAAGTCACTCCGGGCCATGTGTCCTCATT
AGGTGTTCCCAAGACTCTGAAGATCTTGAATAACTCATCAATCTCAGAGT
CTCCTGGAAACAATGGCCGCTGGTTCACCATCTCAGCAAATATACATCCC
ACCGACCACACATCAACTGGAGTAGAGTAATGGCGAGATCCTAGTAATAT
TTCAGGTGCTCTGTACCACAATGTCACCACCTCATGTGTAAATGTCCTAA
CAGGAATAC
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