CX043372

Overview
NameCX043372
Unique NameCX043372
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length709
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX043372 vs. ExPASy Swiss-Prot
Match: KOM8_YEAST (Probable serine/threonine-protein kinase YOL128C OS=Saccharomyces cerevisiae GN=YOL128C PE=1 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 2.852e-14
Identity = 45/126 (35.71%), Postives = 68/126 (53.97%), Query Frame = -3
Query:  309 WYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSEIDELFKIFRVLGTPNEDTWPGVTSLPD------FKSAFPKWPSKELGTVVRNLEPAGIDLLSKMLCMDPSRRITARSALEHEYF 668
            +YRAPE+LL S+ Y+T +D+WS+GCI  EM+  +PLF GDS   +L +I ++LG   + +      L D      FK     +PS         +E   ++ L K+L  D + R  AR  + HE+F
Sbjct:  213 FYRAPELLLNSKDYTTQIDIWSLGCIIGEMIKGQPLFKGDSANSQLEEIAKLLGRFPKSSIKNSQELQDSLNDQKFKKFMHWFPS---------IEFFDVEFLLKVLTYDATERCDARQLMAHEFF 329          
BLAST of CX043372 vs. ExPASy Swiss-Prot
Match: MPK8_ARATH (Mitogen-activated protein kinase 8 OS=Arabidopsis thaliana GN=MPK8 PE=2 SV=2)

HSP 1 Score: 78.5666 bits (192), Expect = 3.725e-14
Identity = 48/132 (36.36%), Postives = 69/132 (52.27%), Query Frame = -3
Query:  309 FTHEVVTLWYRAPEILLGS--RHYSTPVDVWSVGCIFAEMVNQRPLFPGDSEIDELFKIFRVLGTPNEDTWPGVTS--LPDFKSAFPKWPSKELGTVVRNLEPAGIDLLSKMLCMDPSRRITARSALEHEYF 692
            +T  V T WYRAPE L GS    Y+  +D+WSVGCIFAEM+  +PLFPG + + +L  +   LGTP  ++   + +     + S+  K             +P  + LL ++L  DP  R +A  AL   YF
Sbjct:  265 WTDYVATRWYRAPE-LCGSFFSKYTPAIDIWSVGCIFAEMLLGKPLFPGKNVVHQLDLMTDFLGTPPPESISRIRNEKARRYLSSMRKKQPVPFSHKFPKADPLALRLLERLLAFDPKDRASAEDALADPYF 395          
BLAST of CX043372 vs. ExPASy Swiss-Prot
Match: PMK3_CAEEL (Mitogen-activated protein kinase pmk-3 OS=Caenorhabditis elegans GN=pmk-3 PE=2 SV=2)

HSP 1 Score: 78.1814 bits (191), Expect = 4.865e-14
Identity = 47/142 (33.10%), Postives = 74/142 (52.11%), Query Frame = -3
Query:  303 TFTHEVVTLWYRAPEILLGS-RHYSTPVDVWSVGCIFAEMVNQRPLFPGDSEIDELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVR----------NLEPAGIDLLSKMLCMDPSRRITARSALEHEYFRD 695
            + T  V T WYR+PE++      Y+   D+WS+GCI AE++   PLFPGD    +  +I ++ G+P+E+    +T + +  S+  K   +   T  R          N     IDLL K+L +DP +RIT   A++H Y  +
Sbjct:  283 SLTQYVQTRWYRSPEVIYWKIDSYTNLADMWSLGCIAAELLTGEPLFPGDEPNAQYQRITQLCGSPDEEL---LTKIENDNSSAIKAVIQSYTTHKRRNFRDVFSAHNPSEDFIDLLEKLLVLDPEKRITVEEAIQHPYLAE 421          
BLAST of CX043372 vs. ExPASy Swiss-Prot
Match: DYRK4_MOUSE (Dual specificity tyrosine-phosphorylation-regulated kinase 4 OS=Mus musculus GN=Dyrk4 PE=1 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 4.865e-14
Identity = 46/135 (34.07%), Postives = 73/135 (54.07%), Query Frame = -3
Query:  303 WYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSEIDELFKIFRVLGTPNEDTWPGVTSLPDF--KSAFPK----------WP-SKELGTVVRNLEPAGIDLLSKMLCMDPSRRITARSALEHEYFRD 668
            +YR+PE++LG   Y+  +D+WS+GCI AE+    PLFPG++E+++L  I  VLG P        +    F      PK          +P SK+L  VV+  + + +D L + L  +PS R+T   AL+H +  +
Sbjct:  384 FYRSPEVILG-HPYNMAIDMWSLGCIMAELYTGYPLFPGENEVEQLACIMEVLGLPPAHFTQTASRRQVFFDSKGLPKNINNNRGGKRYPDSKDLTMVVKTYDSSFLDFLRRCLVWEPSLRMTPEQALKHAWIHE 517          
BLAST of CX043372 vs. ExPASy Swiss-Prot
Match: MPK9_ARATH (Mitogen-activated protein kinase 9 OS=Arabidopsis thaliana GN=MPK9 PE=2 SV=2)

HSP 1 Score: 77.7962 bits (190), Expect = 6.354e-14
Identity = 46/132 (34.85%), Postives = 70/132 (53.03%), Query Frame = -3
Query:  309 FTHEVVTLWYRAPEILLGS--RHYSTPVDVWSVGCIFAEMVNQRPLFPGDSEIDELFKIFRVLGTPNEDTWPGVTS--LPDFKSAFPKWPSKELGTVVRNLEPAGIDLLSKMLCMDPSRRITARSALEHEYF 692
            +T  V T WYRAPE L GS    Y+  +D+WS+GCIFAEM+  +PLFPG + + +L  +  +LGTP  +    + +     +     + P         +++P  + LL ++L  DP  R +A  AL   YF
Sbjct:  184 WTDYVATRWYRAPE-LCGSFFSKYTPAIDIWSIGCIFAEMLTGKPLFPGKNVVHQLDIMTDLLGTPPPEAIARIRNEKARRYLGNMRRKPPVPFTHKFPHVDPLALRLLHRLLAFDPKDRPSAEEALADPYF 314          
BLAST of CX043372 vs. ExPASy Swiss-Prot
Match: DYRK3_MACFA (Dual specificity tyrosine-phosphorylation-regulated kinase 3 OS=Macaca fascicularis GN=DYRK3 PE=2 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 6.354e-14
Identity = 54/149 (36.24%), Postives = 76/149 (51.01%), Query Frame = -3
Query:  312 WYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSEIDELFKIFRVLGTP---------------NEDTWP---GVTSLPDFKSAF---------PKWP--SKELGTVVRNLEP-AGIDLLSKMLCMDPSRRITARSALEHEY 668
            +YRAPEI+LGSR YSTP+D+WS GCI AE++  +PLFPG+ E D+L  +  +LG P               N    P    VT+  D +             + P  SK+ GT ++  +    I+ L + L  DPS R+T   AL H +
Sbjct:  354 FYRAPEIILGSR-YSTPIDIWSFGCILAELLTGQPLFPGEDEGDQLACMMELLGMPPPKLLEQSKRAKYFINSKGIPRYCSVTTQADGRVVLVGGRSRRGKKRGPPGSKDWGTALKGCDDYLFIEFLKRCLHWDPSARLTPAQALRHPW 501          
BLAST of CX043372 vs. ExPASy Swiss-Prot
Match: DYRK3_HUMAN (Dual specificity tyrosine-phosphorylation-regulated kinase 3 OS=Homo sapiens GN=DYRK3 PE=1 SV=3)

HSP 1 Score: 77.7962 bits (190), Expect = 6.354e-14
Identity = 54/149 (36.24%), Postives = 76/149 (51.01%), Query Frame = -3
Query:  312 WYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSEIDELFKIFRVLGTP---------------NEDTWP---GVTSLPDFKSAF---------PKWP--SKELGTVVRNLEP-AGIDLLSKMLCMDPSRRITARSALEHEY 668
            +YRAPEI+LGSR YSTP+D+WS GCI AE++  +PLFPG+ E D+L  +  +LG P               N    P    VT+  D +             + P  SK+ GT ++  +    I+ L + L  DPS R+T   AL H +
Sbjct:  374 FYRAPEIILGSR-YSTPIDIWSFGCILAELLTGQPLFPGEDEGDQLACMMELLGMPPPKLLEQSKRAKYFINSKGIPRYCSVTTQADGRVVLVGGRSRRGKKRGPPGSKDWGTALKGCDDYLFIEFLKRCLHWDPSARLTPAQALRHPW 521          
BLAST of CX043372 vs. ExPASy Swiss-Prot
Match: Y823_ENCCU (Probable cell division protein kinase ECU08_0230 OS=Encephalitozoon cuniculi GN=ECU08_0230 PE=3 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 8.298e-14
Identity = 36/68 (52.94%), Postives = 48/68 (70.59%), Query Frame = -3
Query:  504 IPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSEIDELFKIFRVLGT 707
            I V  ++ EVVTLWYR+PE+L+GS  Y   VD+WS+GCI  EM+   PLFPG+S+ ++L  I R  GT
Sbjct:  148 IRVPPYSSEVVTLWYRSPELLMGSTSYRFYVDIWSLGCIIYEMITLEPLFPGESKENQLTLIRRKAGT 215          
BLAST of CX043372 vs. ExPASy Swiss-Prot
Match: MK04_HUMAN (Mitogen-activated protein kinase 4 OS=Homo sapiens GN=MAPK4 PE=1 SV=2)

HSP 1 Score: 77.411 bits (189), Expect = 8.298e-14
Identity = 43/125 (34.40%), Postives = 67/125 (53.60%), Query Frame = -3
Query:  312 VVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSEIDELFKIFRVLGT-PNEDTWPGVTSLPDFKSAFPKWPSKE-LGTVVRNLEPAGIDLLSKMLCMDPSRRITARSALEHEY 680
            +VT WYR+P +LL   +Y+  +D+W+ GCI AEM+  R LF G  E++++  I   +     ED    +  +P F S+   W  K  L  ++  +    ID L K+L  +P  R+TA   L+H Y
Sbjct:  189 LVTKWYRSPRLLLSPNNYTKAIDMWAAGCILAEMLTGRMLFAGAHELEQMQLILETIPVIREEDKDELLRVMPSFVSS--TWEVKRPLRKLLPEVNSEAIDFLEKILTFNPMDRLTAEMGLQHPY 311          
BLAST of CX043372 vs. ExPASy Swiss-Prot
Match: DYRK4_HUMAN (Dual specificity tyrosine-phosphorylation-regulated kinase 4 OS=Homo sapiens GN=DYRK4 PE=1 SV=2)

HSP 1 Score: 77.411 bits (189), Expect = 8.298e-14
Identity = 46/132 (34.85%), Postives = 72/132 (54.55%), Query Frame = -3
Query:  312 WYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSEIDELFKIFRVLGTPNEDTWPGVTSLPDF--KSAFPK----------WP-SKELGTVVRNLEPAGIDLLSKMLCMDPSRRITARSALEHEY 668
            +YR+PE++LG   Y   +D+WS+GCI AE+    PLFPG++E+++L  I  VLG P        +    F     FPK          +P SK+L  V++  + + +D L + L  +PS R+T   AL+H +
Sbjct:  269 FYRSPEVILG-HPYDVAIDMWSLGCITAELYTGYPLFPGENEVEQLACIMEVLGLPPAGFIQTASRRQTFFDSKGFPKNITNNRGKKRYPDSKDLTMVLKTYDTSFLDFLRRCLVWEPSLRMTPDQALKHAW 399          
The following BLAST results are available for this feature:
BLAST of CX043372 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
KOM8_YEAST2.852e-1435.71Probable serine/threonine-protein kinase YOL128C O... [more]
MPK8_ARATH3.725e-1436.36Mitogen-activated protein kinase 8 OS=Arabidopsis ... [more]
PMK3_CAEEL4.865e-1433.10Mitogen-activated protein kinase pmk-3 OS=Caenorha... [more]
DYRK4_MOUSE4.865e-1434.07Dual specificity tyrosine-phosphorylation-regulate... [more]
MPK9_ARATH6.354e-1434.85Mitogen-activated protein kinase 9 OS=Arabidopsis ... [more]
DYRK3_MACFA6.354e-1436.24Dual specificity tyrosine-phosphorylation-regulate... [more]
DYRK3_HUMAN6.354e-1436.24Dual specificity tyrosine-phosphorylation-regulate... [more]
Y823_ENCCU8.298e-1452.94Probable cell division protein kinase ECU08_0230 O... [more]
MK04_HUMAN8.298e-1434.40Mitogen-activated protein kinase 4 OS=Homo sapiens... [more]
DYRK4_HUMAN8.298e-1434.85Dual specificity tyrosine-phosphorylation-regulate... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS07_10F05_b Parent Washington Navel Orange Thrip-Challenged Flavedo cDNA Library UCRCS07 Citrus sinensis cDNA clone UCRCS07-10F05-L10-1-7.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX043372 ID=CX043372; Name=CX043372; organism=Citrus sinensis; type=EST; length=709bp
TTTTTTTTTTTTTTTTTGAGTAATCGAACAACAAATTCAATTTGGTGTAT
TGCATATCAAATATTTAAAAGAAAAACTGGCACAAGCATTTATCCACAAG
ATCAAGAAAGCCGCGAATACACGATTACAAACTAGGCAAATCCAGAGATG
ACTGTAAAAAGCCATTCCATGTAGTAAGACTTTTCAGTAAAACTGCAAGT
AAAGACAGTCGGCAAATTTCGCAAACAATCAAAACCAAAGGCTTCACAAT
AATGTCAACACTCTAATAGCATATACAACAGATATTAGGGTACAAATTCG
ACGTCCCTGAAGTATTCATGTTCTAGAGCACTTCTGGCAGTAATTCTTCT
GCTTGGATCCATGCAGAGCATTTTAGAAAGGAGATCAATGCCAGCTGGCT
CAAGATTTCGAACAACAGTCCCCAACTCCTTAGAAGGCCATTTAGGAAAG
GCAGATTTAAAGTCAGGCAATGAAGTCACTCCGGGCCATGTGTCCTCATT
AGGTGTTCCCAAGACTCTGAAGATCTTGAATAACTCATCAATCTCAGAGT
CTCCTGGAAACAATGGCCGCTGGTTCACCATCTCAGCAAATATACATCCC
ACCGACCACACATCAACTGGAGTAGAGTAATGGCGAGATCCTAGTAATAT
TTCAGGTGCTCTGTACCACAATGTCACCACCTCATGTGTAAATGTCCTAA
CAGGAATAC
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