CX043372

Overview
NameCX043372
Unique NameCX043372
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length709
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX043372 vs. ExPASy Swiss-Prot
Match: CSK23_ARATH (Probable casein kinase II subunit alpha OS=Arabidopsis thaliana GN=At2g23080 PE=2 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 8.298e-14
Identity = 49/145 (33.79%), Postives = 77/145 (53.10%), Query Frame = -3
Query:  297 PVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMV-NQRPLFPGDSEIDELFKIFRVLGTPNEDTWPGVTSL---PDFKSA----FPKWPSKELGTVVRNL-EPAGIDLLSKMLCMDPSRRITARSALEHEYFRDVE 704
            P + +   V + +++ PE+L+  + Y   +D+WS+GC+FA M+  + P F G    D+L KI +VLGT   D +     L   P  ++      PK  SK +    ++L  P  ID L K+L  D   R+TAR A++H YF  V+
Sbjct:  179 PGKEYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTNELDHYLNKYQLDLDPQLEALVGRHVPKPWSKFINADNQHLVSPEAIDFLDKLLQYDHQDRLTAREAMDHPYFAQVK 323          
BLAST of CX043372 vs. ExPASy Swiss-Prot
Match: MK06_MOUSE (Mitogen-activated protein kinase 6 OS=Mus musculus GN=Mapk6 PE=1 SV=3)

HSP 1 Score: 77.0258 bits (188), Expect = 1.084e-13
Identity = 40/130 (30.77%), Postives = 68/130 (52.31%), Query Frame = -3
Query:  294 VVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSEIDELFKIFRVLGTPNEDTWPGVTS-LPDFKSAFPKWPSKELGTVVRNLEPAGIDLLSKMLCMDPSRRITARSALEHEYFRDVEF 680
            +VT WYR+P +LL   +Y+  +D+W+ GCIFAEM+  + LF G  E++++  I   +   +E+    + S +P +       P + L  ++  +    +D L ++L   P  R+TA  AL H Y     F
Sbjct:  192 LVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQMQLILDSIPVVHEEDRQELLSVIPVYIRNDMTEPHRPLTQLLPGISREALDFLEQILTFSPMDRLTAEEALSHPYMSIYSF 321          
BLAST of CX043372 vs. ExPASy Swiss-Prot
Match: MCK1_YEAST (Protein kinase MCK1 OS=Saccharomyces cerevisiae GN=MCK1 PE=1 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.084e-13
Identity = 41/135 (30.37%), Postives = 76/135 (56.30%), Query Frame = -3
Query:  300 VVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSEIDELFKIFRVLGTPNE-------DTWPG-VTSLPDFKSAFPKWPSKELGTVVRNLEPAGIDLLSKMLCMDPSRRITARSALEHEYFRDV 680
            + + +YRAPE+++G   Y+T +D+W +GC+  EM+  + +F G   + +L +I ++LG P++         + G + S P F  +  +   K  G    +  P GIDLL K+L  +P +R++ R  L H++F ++
Sbjct:  200 ICSRFYRAPELIIGCTQYTTQIDIWGLGCVMGEMLIGKAIFQGQEPLLQLREIAKLLGPPDKRFIFFSNPAYDGPLFSKPLFSGSSQQRFEKYFG----HSGPDGIDLLMKILVYEPQQRLSPRRILAHQFFNEL 330          
BLAST of CX043372 vs. ExPASy Swiss-Prot
Match: MPK15_ARATH (Mitogen-activated protein kinase 15 OS=Arabidopsis thaliana GN=MPK15 PE=2 SV=3)

HSP 1 Score: 76.2554 bits (186), Expect = 1.849e-13
Identity = 49/136 (36.03%), Postives = 72/136 (52.94%), Query Frame = -3
Query:  309 FTHEVVTLWYRAPEILLGS--RHYSTPVDVWSVGCIFAEMVNQRPLFPGDSEIDELFKIFRVLGTPNEDTWPGVTS------LPDFKSAFPKWPSKELGTVVRNLEPAGIDLLSKMLCMDPSRRITARSALEHEYF 692
            +T  V T WYRAPE L GS    Y+  +D+WSVGCIFAEM+  +PLFPG + + +L  +   LGTP  +    + +      L + +   P   SK+        +P+ + LL +++  DP  R +A  AL   YF
Sbjct:  251 WTDYVATRWYRAPE-LCGSFFSKYTPAIDIWSVGCIFAEMLLGKPLFPGKNVVHQLDIMTDFLGTPPPEAISKIRNDKARRYLGNMRKKQPVPFSKKF----PKADPSALRLLERLIAFDPKDRPSAEEALADPYF 381          
BLAST of CX043372 vs. ExPASy Swiss-Prot
Match: MK04_MOUSE (Mitogen-activated protein kinase 4 OS=Mus musculus GN=Mapk4 PE=2 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 1.849e-13
Identity = 42/125 (33.60%), Postives = 68/125 (54.40%), Query Frame = -3
Query:  312 VVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSEIDELFKIFRVLG-TPNEDTWPGVTSLPDFKSAFPKWPSKE-LGTVVRNLEPAGIDLLSKMLCMDPSRRITARSALEHEY 680
            +VT WYR+P +LL   +Y+  +D+W+ GCI AEM+  + LF G  E++++  I   +     ED    +  +P F S+   W  K  L  ++ ++    ID L K+L  +P  R+TA   L+H Y
Sbjct:  189 LVTKWYRSPRLLLSPNNYTKAIDMWAAGCILAEMLTGKMLFAGAHELEQMQLILDTIPVVREEDKEELLRVMPSFVSS--TWEVKRPLRKLLPDVNSEAIDFLEKILTFNPMDRLTAEMGLQHPY 311          
BLAST of CX043372 vs. ExPASy Swiss-Prot
Match: HOG1_EMENI (Mitogen-activated protein kinase hog1 OS=Emericella nidulans GN=hog1 PE=1 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 1.849e-13
Identity = 51/142 (35.92%), Postives = 70/142 (49.30%), Query Frame = -3
Query:  312 THEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSEIDELFKIFRVLGTPNEDTWPGVTS--LPDFKSAFPKWPSKELGTVVRNLE--------------PAGIDLLSKMLCMDPSRRITARSALEHEY 689
            T  V T +YRAPEI+L  + Y   VDVWS  CIFAEM+   PLFPG   +++   I  +LGTP +D    + S     F  + PK   ++L  + + L                  I+LL  ML  +P  RI+A +AL   Y
Sbjct:  171 TGYVSTRYYRAPEIMLTWQKYDAKVDVWSAACIFAEMLLGAPLFPGKDHVNQFSIITELLGTPPDDVIQTICSENTLRFVKSLPKREPQDLAKLPKFLALVHPDKKPEEDEDYKNTINLLKAMLVYNPKDRISAEAALAAPY 312          
BLAST of CX043372 vs. ExPASy Swiss-Prot
Match: DYRK2_DROME (Dual specificity tyrosine-phosphorylation-regulated kinase 2 OS=Drosophila melanogaster GN=smi35A PE=1 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 2.414e-13
Identity = 44/134 (32.84%), Postives = 70/134 (52.24%), Query Frame = -3
Query:  306 WYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSEIDELFKIFRVLGTPNE-------------DTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGIDLLSKMLCMDPSRRITARSALEHEYFR 668
            +YR+PE++LG + Y T +D+WS+GCI AE+    PLFPG++E+++L  I  VLG P +             D+      + + K       SK L  ++   +   ID L + L  DP+ R+T   A  HE+ +
Sbjct:  363 FYRSPEVILGLQ-YGTAIDMWSLGCILAELYTGFPLFPGENEVEQLACIMEVLGLPPKVLISVARRRRLFFDSRDAPRCITNTKGRKRSPGSKSLAHILHCQDRYFIDFLQRCLEWDPAERMTPDEAAHHEFLQ 495          
BLAST of CX043372 vs. ExPASy Swiss-Prot
Match: CDKL3_RAT (Cyclin-dependent kinase-like 3 OS=Rattus norvegicus GN=Cdkl3 PE=2 SV=2)

HSP 1 Score: 75.485 bits (184), Expect = 3.153e-13
Identity = 50/150 (33.33%), Postives = 72/150 (48.00%), Query Frame = -3
Query:  291 PVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSEIDELFKIFRVLG--TPN-------EDTWPGVTSLPDF---KSAFPKWPSKELGTVVRNLEPAGIDLLSKMLCMDPSRRITARSALEHEYFRDVEFV 704
            P   +T  V T WYRAPE++L    Y  PVD+W++GC+  EM    P  P  S++D L KI   +G  TP+          + GV  LP     K+A  K+P          L     D++   L +DP+ RI++   L H+YF    F+
Sbjct:  153 PGDVYTDYVATRWYRAPELVLKDTTYGKPVDIWALGCMIIEMATGNPYLPSSSDLDLLHKIVLKVGNLTPHLHNIFSKSPIFAGVV-LPQVQHPKNARKKYP---------KLNGLLADIVHACLQIDPAERISSTDLLHHDYFTRDGFI 292          
BLAST of CX043372 vs. ExPASy Swiss-Prot
Match: CDKL3_MACFA (Cyclin-dependent kinase-like 3 OS=Macaca fascicularis GN=CDKL3 PE=2 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 3.153e-13
Identity = 47/149 (31.54%), Postives = 68/149 (45.64%), Query Frame = -3
Query:  291 PVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSEIDELFKIFRVLGTPNEDTWPGVTSLPDF-----------KSAFPKWPSKELGTVVRNLEPAGIDLLSKMLCMDPSRRITARSALEHEYFRDVEFV 704
            P   +T  V T WYRAPE++L    Y  PVD+W++GC+  EM    P  P  S++D L KI   +G  +       +  P F           K+A  K+P          L     D++   L +DP+ RI++   L HEYF    F+
Sbjct:  153 PGDIYTDYVATRWYRAPELVLKDTSYGKPVDIWALGCMIIEMATGNPYLPSSSDLDLLHKIVLKVGNLSPHLQNIFSKSPIFAGVVLPQVQHPKNARKKYP---------KLNGLLADIVHACLQIDPADRISSSDLLHHEYFTRDGFI 292          
BLAST of CX043372 vs. ExPASy Swiss-Prot
Match: CDKL3_HUMAN (Cyclin-dependent kinase-like 3 OS=Homo sapiens GN=CDKL3 PE=2 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 3.153e-13
Identity = 47/149 (31.54%), Postives = 68/149 (45.64%), Query Frame = -3
Query:  291 PVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSEIDELFKIFRVLGTPNEDTWPGVTSLPDF-----------KSAFPKWPSKELGTVVRNLEPAGIDLLSKMLCMDPSRRITARSALEHEYFRDVEFV 704
            P   +T  V T WYRAPE++L    Y  PVD+W++GC+  EM    P  P  S++D L KI   +G  +       +  P F           K+A  K+P          L     D++   L +DP+ RI++   L HEYF    F+
Sbjct:  153 PGDIYTDYVATRWYRAPELVLKDTSYGKPVDIWALGCMIIEMATGNPYLPSSSDLDLLHKIVLKVGNLSPHLQNIFSKSPIFAGVVLPQVQHPKNARKKYP---------KLNGLLADIVHACLQIDPADRISSSDLLHHEYFTRDGFI 292          
The following BLAST results are available for this feature:
BLAST of CX043372 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CSK23_ARATH8.298e-1433.79Probable casein kinase II subunit alpha OS=Arabido... [more]
MK06_MOUSE1.084e-1330.77Mitogen-activated protein kinase 6 OS=Mus musculus... [more]
MCK1_YEAST1.084e-1330.37Protein kinase MCK1 OS=Saccharomyces cerevisiae GN... [more]
MPK15_ARATH1.849e-1336.03Mitogen-activated protein kinase 15 OS=Arabidopsis... [more]
MK04_MOUSE1.849e-1333.60Mitogen-activated protein kinase 4 OS=Mus musculus... [more]
HOG1_EMENI1.849e-1335.92Mitogen-activated protein kinase hog1 OS=Emericell... [more]
DYRK2_DROME2.414e-1332.84Dual specificity tyrosine-phosphorylation-regulate... [more]
CDKL3_RAT3.153e-1333.33Cyclin-dependent kinase-like 3 OS=Rattus norvegicu... [more]
CDKL3_MACFA3.153e-1331.54Cyclin-dependent kinase-like 3 OS=Macaca fascicula... [more]
CDKL3_HUMAN3.153e-1331.54Cyclin-dependent kinase-like 3 OS=Homo sapiens GN=... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS07_10F05_b Parent Washington Navel Orange Thrip-Challenged Flavedo cDNA Library UCRCS07 Citrus sinensis cDNA clone UCRCS07-10F05-L10-1-7.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX043372 ID=CX043372; Name=CX043372; organism=Citrus sinensis; type=EST; length=709bp
TTTTTTTTTTTTTTTTTGAGTAATCGAACAACAAATTCAATTTGGTGTAT
TGCATATCAAATATTTAAAAGAAAAACTGGCACAAGCATTTATCCACAAG
ATCAAGAAAGCCGCGAATACACGATTACAAACTAGGCAAATCCAGAGATG
ACTGTAAAAAGCCATTCCATGTAGTAAGACTTTTCAGTAAAACTGCAAGT
AAAGACAGTCGGCAAATTTCGCAAACAATCAAAACCAAAGGCTTCACAAT
AATGTCAACACTCTAATAGCATATACAACAGATATTAGGGTACAAATTCG
ACGTCCCTGAAGTATTCATGTTCTAGAGCACTTCTGGCAGTAATTCTTCT
GCTTGGATCCATGCAGAGCATTTTAGAAAGGAGATCAATGCCAGCTGGCT
CAAGATTTCGAACAACAGTCCCCAACTCCTTAGAAGGCCATTTAGGAAAG
GCAGATTTAAAGTCAGGCAATGAAGTCACTCCGGGCCATGTGTCCTCATT
AGGTGTTCCCAAGACTCTGAAGATCTTGAATAACTCATCAATCTCAGAGT
CTCCTGGAAACAATGGCCGCTGGTTCACCATCTCAGCAAATATACATCCC
ACCGACCACACATCAACTGGAGTAGAGTAATGGCGAGATCCTAGTAATAT
TTCAGGTGCTCTGTACCACAATGTCACCACCTCATGTGTAAATGTCCTAA
CAGGAATAC
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