CX043372

Overview
NameCX043372
Unique NameCX043372
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length709
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX043372 vs. ExPASy Swiss-Prot
Match: CSK22_HUMAN (Casein kinase II subunit alpha' OS=Homo sapiens GN=CSNK2A2 PE=1 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 4.118e-13
Identity = 44/146 (30.14%), Postives = 75/146 (51.37%), Query Frame = -3
Query:  300 PVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQR-PLFPGDSEIDELFKIFRVLGTPNEDTWPGVTSL-----PDFKSAFPKWPSKELGTVVRN-----LEPAGIDLLSKMLCMDPSRRITARSALEHEYFRDV 704
            P + +   V + +++ PE+L+  + Y   +D+WS+GC+ A M+ +R P F G    D+L +I +VLGT  E+ +  +        P F     +   K     + +     + P  +DLL K+L  D  +R+TA+ A+EH YF  V
Sbjct:  185 PAQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRREPFFHGQDNYDQLVRIAKVLGT--EELYGYLKKYHIDLDPHFNDILGQHSRKRWENFIHSENRHLVSPEALDLLDKLLRYDHQQRLTAKEAMEHPYFYPV 328          
BLAST of CX043372 vs. ExPASy Swiss-Prot
Match: PPK5_SCHPO (Serine/threonine-protein kinase ppk5 OS=Schizosaccharomyces pombe GN=ppk5 PE=1 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 5.379e-13
Identity = 49/132 (37.12%), Postives = 66/132 (50.00%), Query Frame = -3
Query:  312 WYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSEIDELFKIFRVLGTPNEDTWPGVT-SLPDFKSAFPKWP------------SKELGTVVRNLEPAGIDLLSKMLCMDPSRRITARSALEHEY 668
            +YRAPEI+LG   Y   +D+WS GCI AE+    PLFPG +E ++L  I  VLG P        T S   F S     P            ++    ++   + + +D LSK L  DP  RIT  SAL+HE+
Sbjct:  683 FYRAPEIILGLE-YGKEIDIWSFGCILAELFTGVPLFPGGNETEQLGYIMEVLGPPPMALIRNSTRSKAYFDSEGKPHPITDSHNRLLVPSTRTFSQLLNTKQASFLDFLSKCLKWDPKDRITVDSALQHEF 813          
BLAST of CX043372 vs. ExPASy Swiss-Prot
Match: CSK21_RAT (Casein kinase II subunit alpha OS=Rattus norvegicus GN=Csnk2a1 PE=1 SV=2)

HSP 1 Score: 74.3294 bits (181), Expect = 7.025e-13
Identity = 45/146 (30.82%), Postives = 72/146 (49.32%), Query Frame = -3
Query:  300 PVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMV-NQRPLFPGDSEIDELFKIFRVLGTPNEDTWPGVTSL-----PDFKSAFPKWPSKELGTVVRN-----LEPAGIDLLSKMLCMDPSRRITARSALEHEYFRDV 704
            P + +   V + +++ PE+L+  + Y   +D+WS+GC+ A M+  + P F G    D+L +I +VLGT  ED +  +        P F     +   K     V +     + P  +D L K+L  D   R+TAR A+EH YF  V
Sbjct:  184 PGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGT--EDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYFYTV 327          
BLAST of CX043372 vs. ExPASy Swiss-Prot
Match: CSK21_RABIT (Casein kinase II subunit alpha OS=Oryctolagus cuniculus GN=CSNK2A1 PE=2 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 7.025e-13
Identity = 45/146 (30.82%), Postives = 72/146 (49.32%), Query Frame = -3
Query:  300 PVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMV-NQRPLFPGDSEIDELFKIFRVLGTPNEDTWPGVTSL-----PDFKSAFPKWPSKELGTVVRN-----LEPAGIDLLSKMLCMDPSRRITARSALEHEYFRDV 704
            P + +   V + +++ PE+L+  + Y   +D+WS+GC+ A M+  + P F G    D+L +I +VLGT  ED +  +        P F     +   K     V +     + P  +D L K+L  D   R+TAR A+EH YF  V
Sbjct:  184 PGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGT--EDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYFYTV 327          
BLAST of CX043372 vs. ExPASy Swiss-Prot
Match: CSK21_HUMAN (Casein kinase II subunit alpha OS=Homo sapiens GN=CSNK2A1 PE=1 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 7.025e-13
Identity = 45/146 (30.82%), Postives = 72/146 (49.32%), Query Frame = -3
Query:  300 PVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMV-NQRPLFPGDSEIDELFKIFRVLGTPNEDTWPGVTSL-----PDFKSAFPKWPSKELGTVVRN-----LEPAGIDLLSKMLCMDPSRRITARSALEHEYFRDV 704
            P + +   V + +++ PE+L+  + Y   +D+WS+GC+ A M+  + P F G    D+L +I +VLGT  ED +  +        P F     +   K     V +     + P  +D L K+L  D   R+TAR A+EH YF  V
Sbjct:  184 PGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGT--EDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYFYTV 327          
BLAST of CX043372 vs. ExPASy Swiss-Prot
Match: CSK21_BOVIN (Casein kinase II subunit alpha OS=Bos taurus GN=CSNK2A1 PE=1 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 7.025e-13
Identity = 45/146 (30.82%), Postives = 72/146 (49.32%), Query Frame = -3
Query:  300 PVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMV-NQRPLFPGDSEIDELFKIFRVLGTPNEDTWPGVTSL-----PDFKSAFPKWPSKELGTVVRN-----LEPAGIDLLSKMLCMDPSRRITARSALEHEYFRDV 704
            P + +   V + +++ PE+L+  + Y   +D+WS+GC+ A M+  + P F G    D+L +I +VLGT  ED +  +        P F     +   K     V +     + P  +D L K+L  D   R+TAR A+EH YF  V
Sbjct:  184 PGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGT--EDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYFYTV 327          
BLAST of CX043372 vs. ExPASy Swiss-Prot
Match: CDKL3_MOUSE (Cyclin-dependent kinase-like 3 OS=Mus musculus GN=Cdkl3 PE=2 SV=2)

HSP 1 Score: 74.3294 bits (181), Expect = 7.025e-13
Identity = 49/150 (32.67%), Postives = 71/150 (47.33%), Query Frame = -3
Query:  291 PVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSEIDELFKIFRVLG--TPN-------EDTWPGVTSLPDF---KSAFPKWPSKELGTVVRNLEPAGIDLLSKMLCMDPSRRITARSALEHEYFRDVEFV 704
            P   +T  V T WYRAPE++L    Y  PVD+W++GC+  EM    P  P  S++D L KI   +G  TP+          + GV  LP     K+A  K+P          L     D++   L +DP+ R ++   L H+YF    F+
Sbjct:  153 PGDVYTDYVATRWYRAPELVLKDTSYGKPVDIWALGCMIIEMATGHPFLPSSSDLDLLHKIVLKVGNLTPHLHNIFSKSPIFAGVV-LPQVQHPKTARKKYP---------KLNGLLADIVHACLQIDPAERTSSTDLLRHDYFTRDGFI 292          
BLAST of CX043372 vs. ExPASy Swiss-Prot
Match: CSK21_CHICK (Casein kinase II subunit alpha OS=Gallus gallus GN=CSNK2A1 PE=2 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 9.175e-13
Identity = 44/143 (30.77%), Postives = 71/143 (49.65%), Query Frame = -3
Query:  309 PVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMV-NQRPLFPGDSEIDELFKIFRVLGTPNEDTWPGVTSL-----PDFKSAFPKWPSKELGTVVRN-----LEPAGIDLLSKMLCMDPSRRITARSALEHEYF 704
            P + +   V + +++ PE+L+  + Y   +D+WS+GC+ A M+  + P F G    D+L +I +VLGT  ED +  +        P F     +   K     V +     + P  +D L K+L  D   R+TAR A+EH YF
Sbjct:  184 PGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGT--EDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 324          
BLAST of CX043372 vs. ExPASy Swiss-Prot
Match: POM1_SCHPO (Dual specificity protein kinase pom1 OS=Schizosaccharomyces pombe GN=pom1 PE=1 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.198e-12
Identity = 43/132 (32.58%), Postives = 68/132 (51.52%), Query Frame = -3
Query:  312 WYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSEIDELFKIFRVLGTPNE-------------DTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGIDLLSKMLCMDPSRRITARSALEHEY 668
            +YR+PE++LG   Y TP+DVWS+GCI AEM    PLFPG++E ++L  I  + G P+              D+          K    +  SK L  V++  + + +  +S  L  DP  R+T + A +H++
Sbjct:  864 FYRSPEVILGMG-YGTPIDVWSLGCIIAEMYTGFPLFPGENEQEQLACIMEIFGPPDHSLIDKCSRKKVFFDSSGKPRPFVSSKGVSRRPFSKSLHQVLQCKDVSFLSFISDCLKWDPDERMTPQQAAQHDF 994          
BLAST of CX043372 vs. ExPASy Swiss-Prot
Match: CSK22_MOUSE (Casein kinase II subunit alpha' OS=Mus musculus GN=Csnk2a2 PE=2 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.198e-12
Identity = 44/147 (29.93%), Postives = 73/147 (49.66%), Query Frame = -3
Query:  300 PVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMV-NQRPLFPGDSEIDELFKIFRVLGTPNEDTWPG------VTSLPDFKSAFPKWPSKELGTVVRN-----LEPAGIDLLSKMLCMDPSRRITARSALEHEYFRDV 704
            P + +   V + +++ PE+L+  + Y   +D+WS+GC+ A M+  + P F G    D+L +I +VLGT   D   G      +   P F     +   K     + +     + P  +DLL K+L  D  +R+TA+ A+EH YF  V
Sbjct:  185 PAQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGQDNYDQLVRIAKVLGT---DELYGYLKKYHIDLDPHFNDILGQHSRKRWENFIHSENRHLVSPEALDLLDKLLRYDHQQRLTAKEAMEHPYFYPV 328          
The following BLAST results are available for this feature:
BLAST of CX043372 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CSK22_HUMAN4.118e-1330.14Casein kinase II subunit alpha' OS=Homo sapiens GN... [more]
PPK5_SCHPO5.379e-1337.12Serine/threonine-protein kinase ppk5 OS=Schizosacc... [more]
CSK21_RAT7.025e-1330.82Casein kinase II subunit alpha OS=Rattus norvegicu... [more]
CSK21_RABIT7.025e-1330.82Casein kinase II subunit alpha OS=Oryctolagus cuni... [more]
CSK21_HUMAN7.025e-1330.82Casein kinase II subunit alpha OS=Homo sapiens GN=... [more]
CSK21_BOVIN7.025e-1330.82Casein kinase II subunit alpha OS=Bos taurus GN=CS... [more]
CDKL3_MOUSE7.025e-1332.67Cyclin-dependent kinase-like 3 OS=Mus musculus GN=... [more]
CSK21_CHICK9.175e-1330.77Casein kinase II subunit alpha OS=Gallus gallus GN... [more]
POM1_SCHPO1.198e-1232.58Dual specificity protein kinase pom1 OS=Schizosacc... [more]
CSK22_MOUSE1.198e-1229.93Casein kinase II subunit alpha' OS=Mus musculus GN... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS07_10F05_b Parent Washington Navel Orange Thrip-Challenged Flavedo cDNA Library UCRCS07 Citrus sinensis cDNA clone UCRCS07-10F05-L10-1-7.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX043372 ID=CX043372; Name=CX043372; organism=Citrus sinensis; type=EST; length=709bp
TTTTTTTTTTTTTTTTTGAGTAATCGAACAACAAATTCAATTTGGTGTAT
TGCATATCAAATATTTAAAAGAAAAACTGGCACAAGCATTTATCCACAAG
ATCAAGAAAGCCGCGAATACACGATTACAAACTAGGCAAATCCAGAGATG
ACTGTAAAAAGCCATTCCATGTAGTAAGACTTTTCAGTAAAACTGCAAGT
AAAGACAGTCGGCAAATTTCGCAAACAATCAAAACCAAAGGCTTCACAAT
AATGTCAACACTCTAATAGCATATACAACAGATATTAGGGTACAAATTCG
ACGTCCCTGAAGTATTCATGTTCTAGAGCACTTCTGGCAGTAATTCTTCT
GCTTGGATCCATGCAGAGCATTTTAGAAAGGAGATCAATGCCAGCTGGCT
CAAGATTTCGAACAACAGTCCCCAACTCCTTAGAAGGCCATTTAGGAAAG
GCAGATTTAAAGTCAGGCAATGAAGTCACTCCGGGCCATGTGTCCTCATT
AGGTGTTCCCAAGACTCTGAAGATCTTGAATAACTCATCAATCTCAGAGT
CTCCTGGAAACAATGGCCGCTGGTTCACCATCTCAGCAAATATACATCCC
ACCGACCACACATCAACTGGAGTAGAGTAATGGCGAGATCCTAGTAATAT
TTCAGGTGCTCTGTACCACAATGTCACCACCTCATGTGTAAATGTCCTAA
CAGGAATAC
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