CX043372

Overview
NameCX043372
Unique NameCX043372
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length709
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX043372 vs. ExPASy Swiss-Prot
Match: CDK17_HUMAN (Cell division protein kinase 17 OS=Homo sapiens GN=CDK17 PE=1 SV=2)

HSP 1 Score: 149.058 bits (375), Expect = 2.244e-35
Identity = 67/137 (48.91%), Postives = 99/137 (72.26%), Query Frame = -3
Query:  300 IPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSEIDELFKIFRVLGTPNEDTWPGVTSLPDFKS-AFPKWPSKELGTVVRNLEPAGIDLLSKMLCMDPSRRITARSALEHEYFRDV 707
            +P +T+++EVVTLWYR P++LLGS  YST +D+W VGCIF EM + RPLFPG +  DEL  IFR+LGTP+++TWPG++S  +FK+  FPK+  + L      L+  GI+L++K L  +  +R++A  A++H YFR +
Sbjct:  340 VPTKTYSNEVVTLWYRPPDVLLGSSEYSTQIDMWGVGCIFFEMASGRPLFPGSTVEDELHLIFRLLGTPSQETWPGISSNEEFKNYNFPKYKPQPLINHAPRLDSEGIELITKFLQYESKKRVSAEEAMKHVYFRSL 476          
BLAST of CX043372 vs. ExPASy Swiss-Prot
Match: CDK17_MOUSE (Cell division protein kinase 17 OS=Mus musculus GN=Cdk17 PE=1 SV=2)

HSP 1 Score: 148.673 bits (374), Expect = 2.931e-35
Identity = 68/137 (49.64%), Postives = 98/137 (71.53%), Query Frame = -3
Query:  300 IPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSEIDELFKIFRVLGTPNEDTWPGVTSLPDFKS-AFPKWPSKELGTVVRNLEPAGIDLLSKMLCMDPSRRITARSALEHEYFRDV 707
            +P +T+++EVVTLWYR P++LLGS  YST +D+W VGCIF EM + RPLFPG +  DEL  IFR+LGTP+++TWPGV+S  +FK+  FPK+  + L      L+  GI+L++K L  +  +R+ A  A++H YFR +
Sbjct:  340 VPTKTYSNEVVTLWYRPPDVLLGSSEYSTQIDMWGVGCIFFEMASGRPLFPGSTVEDELHLIFRLLGTPSQETWPGVSSNDEFKNYNFPKYKPQPLINHAPRLDSEGIELITKFLQYESKKRVPAEEAMKHVYFRSL 476          
BLAST of CX043372 vs. ExPASy Swiss-Prot
Match: CDK18_PONAB (Cell division protein kinase 18 OS=Pongo abelii GN=CDK18 PE=2 SV=2)

HSP 1 Score: 148.288 bits (373), Expect = 3.828e-35
Identity = 68/137 (49.64%), Postives = 97/137 (70.80%), Query Frame = -3
Query:  300 IPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSEIDELFKIFRVLGTPNEDTWPGVTSLPDFKS-AFPKWPSKELGTVVRNLEPAGIDLLSKMLCMDPSRRITARSALEHEYFRDV 707
            +P +T+++EVVTLWYR P++LLGS  YSTP+D+W VGCI  EM   RPLFPG +  +EL  IFR+LGTP E+TWPGVT+  +F++ +FP++  + L +    L+  GI LLS +L  +   R++A +AL H YFR +
Sbjct:  290 VPTKTYSNEVVTLWYRPPDVLLGSTEYSTPIDMWGVGCIHYEMATGRPLFPGSTVKEELHLIFRLLGTPTEETWPGVTAFSEFRTYSFPRYLPQPLISHAPRLDTDGIQLLSSLLLYESKSRMSAEAALSHPYFRSL 426          
BLAST of CX043372 vs. ExPASy Swiss-Prot
Match: CDK2_ENTHI (Cell division protein kinase 2 homolog OS=Entamoeba histolytica GN=CDC2 PE=3 SV=1)

HSP 1 Score: 147.132 bits (370), Expect = 8.528e-35
Identity = 70/130 (53.85%), Postives = 88/130 (67.69%), Query Frame = -3
Query:  309 RTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSEIDELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGIDLLSKMLCMDPSRRITARSALEHEYF 698
            R +T EVVTLWYRAPEILLG+  Y   +D+WS   IF E++N+  LF G  +ID+LFKIF  LGTP ED W GVT LP + S FPKW +K+L T+    E A +DLL KM    P +RI+A  AL+H +F
Sbjct:  155 RKYTSEVVTLWYRAPEILLGATQYGGAIDIWSTAAIFGELINKEELFKGRCKIDQLFKIFSQLGTPTEDIWNGVTKLPFYLSTFPKWKAKDLHTIFHTDERA-VDLLQKMFIYTPEKRISAADALKHPFF 283          
BLAST of CX043372 vs. ExPASy Swiss-Prot
Match: CDK17_RAT (Cell division protein kinase 17 OS=Rattus norvegicus GN=Cdk17 PE=1 SV=1)

HSP 1 Score: 147.132 bits (370), Expect = 8.528e-35
Identity = 68/137 (49.64%), Postives = 97/137 (70.80%), Query Frame = -3
Query:  300 IPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSEIDELFKIFRVLGTPNEDTWPGVTSLPDFKS-AFPKWPSKELGTVVRNLEPAGIDLLSKMLCMDPSRRITARSALEHEYFRDV 707
            +P +T+++EVVTLWYR P++LLGS  YST +D+W VGCIF EM + RPLFPG +  DEL  IFR+LGTP+++TWPGV+S  +FK+  FPK+  + L      L+  GI+L++K L  +  +R  A  A++H YFR +
Sbjct:  340 VPTKTYSNEVVTLWYRPPDVLLGSSEYSTQIDMWGVGCIFFEMASGRPLFPGSTVEDELHLIFRLLGTPSQETWPGVSSNDEFKNYNFPKYKPQPLINHAPRLDSEGIELITKFLQYESKKRAPAEEAMKHVYFRSL 476          
BLAST of CX043372 vs. ExPASy Swiss-Prot
Match: CDK5_RAT (Cell division protein kinase 5 OS=Rattus norvegicus GN=Cdk5 PE=1 SV=1)

HSP 1 Score: 146.747 bits (369), Expect = 1.114e-34
Identity = 72/137 (52.55%), Postives = 96/137 (70.07%), Query Frame = -3
Query:  303 IPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQ-RPLFPGDSEIDELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWP-SKELGTVVRNLEPAGIDLLSKMLCMDPSRRITARSALEHEYFRD 707
            IPVR ++ EVVTLWYR P++L G++ YST +D+WS GCIFAE+ N  RPLFPG+   D+L +IFR+LGTP E+ WP +T LPD+K  +P +P +  L  VV  L   G DLL  +L  +P +RI+A  AL+H YF D
Sbjct:  153 IPVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPAMTKLPDYK-PYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQHPYFSD 288          
BLAST of CX043372 vs. ExPASy Swiss-Prot
Match: CDK5_MOUSE (Cell division protein kinase 5 OS=Mus musculus GN=Cdk5 PE=1 SV=1)

HSP 1 Score: 146.747 bits (369), Expect = 1.114e-34
Identity = 72/137 (52.55%), Postives = 96/137 (70.07%), Query Frame = -3
Query:  303 IPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQ-RPLFPGDSEIDELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWP-SKELGTVVRNLEPAGIDLLSKMLCMDPSRRITARSALEHEYFRD 707
            IPVR ++ EVVTLWYR P++L G++ YST +D+WS GCIFAE+ N  RPLFPG+   D+L +IFR+LGTP E+ WP +T LPD+K  +P +P +  L  VV  L   G DLL  +L  +P +RI+A  AL+H YF D
Sbjct:  153 IPVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPAMTKLPDYK-PYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQHPYFSD 288          
BLAST of CX043372 vs. ExPASy Swiss-Prot
Match: CDK5_HUMAN (Cell division protein kinase 5 OS=Homo sapiens GN=CDK5 PE=1 SV=3)

HSP 1 Score: 146.747 bits (369), Expect = 1.114e-34
Identity = 72/137 (52.55%), Postives = 96/137 (70.07%), Query Frame = -3
Query:  303 IPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQ-RPLFPGDSEIDELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWP-SKELGTVVRNLEPAGIDLLSKMLCMDPSRRITARSALEHEYFRD 707
            IPVR ++ EVVTLWYR P++L G++ YST +D+WS GCIFAE+ N  RPLFPG+   D+L +IFR+LGTP E+ WP +T LPD+K  +P +P +  L  VV  L   G DLL  +L  +P +RI+A  AL+H YF D
Sbjct:  153 IPVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDYK-PYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQHPYFSD 288          
BLAST of CX043372 vs. ExPASy Swiss-Prot
Match: CDK5_BOVIN (Cell division protein kinase 5 OS=Bos taurus GN=CDK5 PE=1 SV=2)

HSP 1 Score: 146.747 bits (369), Expect = 1.114e-34
Identity = 72/137 (52.55%), Postives = 96/137 (70.07%), Query Frame = -3
Query:  303 IPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQ-RPLFPGDSEIDELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWP-SKELGTVVRNLEPAGIDLLSKMLCMDPSRRITARSALEHEYFRD 707
            IPVR ++ EVVTLWYR P++L G++ YST +D+WS GCIFAE+ N  RPLFPG+   D+L +IFR+LGTP E+ WP +T LPD+K  +P +P +  L  VV  L   G DLL  +L  +P +RI+A  AL+H YF D
Sbjct:  153 IPVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPAMTKLPDYK-PYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQHPYFSD 288          
BLAST of CX043372 vs. ExPASy Swiss-Prot
Match: CDK11_MOUSE (Cell division protein kinase 11 OS=Mus musculus GN=Cdk11 PE=1 SV=2)

HSP 1 Score: 146.747 bits (369), Expect = 1.114e-34
Identity = 72/139 (51.80%), Postives = 94/139 (67.63%), Query Frame = -3
Query:  303 PVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSEIDELFKIFRVLGTPNEDTWPGVTSLPDFKS-AFPKWP----SKELGTVVRNLEPAGIDLLSKMLCMDPSRRITARSALEHEYFRD 704
            P++ +T  VVTLWYRAPE+LLG++ YST VD+WSVGCIF E++ Q+PLFPG S+ID++ KIF+ LGTP+E  WPG   LP  K   F ++P     K  G +   L   G DL++K L   P RRI A   L+HEYFR+
Sbjct:  579 PLKAYTPVVVTLWYRAPELLLGAKEYSTAVDMWSVGCIFGELLTQKPLFPGKSDIDQINKIFKDLGTPSEKIWPGYNDLPAVKKMTFSEYPYNNLRKRFGAL---LSDQGFDLMNKFLTYYPGRRINAEDGLKHEYFRE 714          
The following BLAST results are available for this feature:
BLAST of CX043372 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CDK17_HUMAN2.244e-3548.91Cell division protein kinase 17 OS=Homo sapiens GN... [more]
CDK17_MOUSE2.931e-3549.64Cell division protein kinase 17 OS=Mus musculus GN... [more]
CDK18_PONAB3.828e-3549.64Cell division protein kinase 18 OS=Pongo abelii GN... [more]
CDK2_ENTHI8.528e-3553.85Cell division protein kinase 2 homolog OS=Entamoeb... [more]
CDK17_RAT8.528e-3549.64Cell division protein kinase 17 OS=Rattus norvegic... [more]
CDK5_RAT1.114e-3452.55Cell division protein kinase 5 OS=Rattus norvegicu... [more]
CDK5_MOUSE1.114e-3452.55Cell division protein kinase 5 OS=Mus musculus GN=... [more]
CDK5_HUMAN1.114e-3452.55Cell division protein kinase 5 OS=Homo sapiens GN=... [more]
CDK5_BOVIN1.114e-3452.55Cell division protein kinase 5 OS=Bos taurus GN=CD... [more]
CDK11_MOUSE1.114e-3451.80Cell division protein kinase 11 OS=Mus musculus GN... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS07_10F05_b Parent Washington Navel Orange Thrip-Challenged Flavedo cDNA Library UCRCS07 Citrus sinensis cDNA clone UCRCS07-10F05-L10-1-7.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX043372 ID=CX043372; Name=CX043372; organism=Citrus sinensis; type=EST; length=709bp
TTTTTTTTTTTTTTTTTGAGTAATCGAACAACAAATTCAATTTGGTGTAT
TGCATATCAAATATTTAAAAGAAAAACTGGCACAAGCATTTATCCACAAG
ATCAAGAAAGCCGCGAATACACGATTACAAACTAGGCAAATCCAGAGATG
ACTGTAAAAAGCCATTCCATGTAGTAAGACTTTTCAGTAAAACTGCAAGT
AAAGACAGTCGGCAAATTTCGCAAACAATCAAAACCAAAGGCTTCACAAT
AATGTCAACACTCTAATAGCATATACAACAGATATTAGGGTACAAATTCG
ACGTCCCTGAAGTATTCATGTTCTAGAGCACTTCTGGCAGTAATTCTTCT
GCTTGGATCCATGCAGAGCATTTTAGAAAGGAGATCAATGCCAGCTGGCT
CAAGATTTCGAACAACAGTCCCCAACTCCTTAGAAGGCCATTTAGGAAAG
GCAGATTTAAAGTCAGGCAATGAAGTCACTCCGGGCCATGTGTCCTCATT
AGGTGTTCCCAAGACTCTGAAGATCTTGAATAACTCATCAATCTCAGAGT
CTCCTGGAAACAATGGCCGCTGGTTCACCATCTCAGCAAATATACATCCC
ACCGACCACACATCAACTGGAGTAGAGTAATGGCGAGATCCTAGTAATAT
TTCAGGTGCTCTGTACCACAATGTCACCACCTCATGTGTAAATGTCCTAA
CAGGAATAC
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