CX043372

Overview
NameCX043372
Unique NameCX043372
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length709
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX043372 vs. ExPASy Swiss-Prot
Match: CKD18_RAT (Cell division protein kinase 18 OS=Rattus norvegicus GN=Cdk18 PE=1 SV=1)

HSP 1 Score: 144.821 bits (364), Expect = 4.232e-34
Identity = 65/137 (47.45%), Postives = 98/137 (71.53%), Query Frame = -3
Query:  300 IPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSEIDELFKIFRVLGTPNEDTWPGVTSLPDFKS-AFPKWPSKELGTVVRNLEPAGIDLLSKMLCMDPSRRITARSALEHEYFRDV 707
            +P +T+++EVVTLWYR P++LLGS  YSTP+D+W VGCI  EM   +PLFPG +  +EL  IFR+LGTP E++WPGVTS+ +F++  FP++  + L +    L+  GI+LL+ +L  +   R++A +AL H YF+ +
Sbjct:  269 VPTKTYSNEVVTLWYRPPDVLLGSTEYSTPIDMWGVGCILYEMATGKPLFPGSTVKEELHLIFRLLGTPTEESWPGVTSISEFRAYNFPRYLPQPLLSHAPRLDTEGINLLTSLLLYESKSRMSAEAALSHPYFQSL 405          
BLAST of CX043372 vs. ExPASy Swiss-Prot
Match: PHO85_CANGA (Negative regulator of the PHO system OS=Candida glabrata GN=PHO85 PE=3 SV=1)

HSP 1 Score: 143.665 bits (361), Expect = 9.428e-34
Identity = 72/140 (51.43%), Postives = 97/140 (69.29%), Query Frame = -3
Query:  303 IPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSEIDELFKIFRVLGTPNEDTWPGVTSL----PDFKSAFPKWPSKELGTVVRN-LEPAGIDLLSKMLCMDPSRRITARSALEHEYFRD 707
            IPV TF+ EVVTLWYRAP++L+GSR YST +D+WS GCI AEM+  +PLFPG ++ ++L  IF  +GTPNE TWPGVTSL    P+F+   PK    EL   V+  L+   IDLL  +L ++P  R++A+ AL H +F +
Sbjct:  159 IPVNTFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQLKLIFDKMGTPNETTWPGVTSLPKYNPNFQQRLPKDLKAELQPYVKEPLDDNVIDLLHGLLQLNPDMRLSAKQALLHPWFSE 298          
BLAST of CX043372 vs. ExPASy Swiss-Prot
Match: CDKG1_ORYSJ (Cyclin-dependent kinase G-1 OS=Oryza sativa subsp. japonica GN=CDKG-1 PE=2 SV=1)

HSP 1 Score: 143.665 bits (361), Expect = 9.428e-34
Identity = 70/143 (48.95%), Postives = 95/143 (66.43%), Query Frame = -3
Query:  300 PVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSEIDELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVR--------NLEPAGIDLLSKMLCMDPSRRITARSALEHEYFRDV 704
            P++ +T  VVTLWYRAPE+LLG++ YST +D+WS+GCI  E++++ PLF G SEID+L KIFR LGTP+E+ WPG + LP     F K     L    R         L  AG DLL+++L  DP +RI+A  AL HE+FR++
Sbjct:  501 PLKPYTQLVVTLWYRAPELLLGAKDYSTAIDMWSLGCIMGELLSKGPLFNGKSEIDQLDKIFRTLGTPDENIWPGYSKLPGATVKFGKQTHNRLRDKFRAVSFTGGPMLSEAGFDLLNRLLTYDPEKRISAEDALNHEWFREL 643          
BLAST of CX043372 vs. ExPASy Swiss-Prot
Match: CDKG1_ORYSI (Cyclin-dependent kinase G-1 OS=Oryza sativa subsp. indica GN=CDKG-1 PE=2 SV=1)

HSP 1 Score: 143.665 bits (361), Expect = 9.428e-34
Identity = 70/143 (48.95%), Postives = 95/143 (66.43%), Query Frame = -3
Query:  300 PVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSEIDELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVR--------NLEPAGIDLLSKMLCMDPSRRITARSALEHEYFRDV 704
            P++ +T  VVTLWYRAPE+LLG++ YST +D+WS+GCI  E++++ PLF G SEID+L KIFR LGTP+E+ WPG + LP     F K     L    R         L  AG DLL+++L  DP +RI+A  AL HE+FR++
Sbjct:  501 PLKPYTQLVVTLWYRAPELLLGAKDYSTAIDMWSLGCIMGELLSKGPLFNGKSEIDQLDKIFRTLGTPDENIWPGYSKLPGATVKFGKQTHNRLRDKFRAVSFTGGPMLSEAGFDLLNRLLTYDPEKRISAEDALNHEWFREL 643          
BLAST of CX043372 vs. ExPASy Swiss-Prot
Match: KP58_DROME (Serine/threonine-protein kinase PITSLRE OS=Drosophila melanogaster GN=Pitslre PE=1 SV=1)

HSP 1 Score: 142.895 bits (359), Expect = 1.608e-33
Identity = 72/142 (50.70%), Postives = 94/142 (66.20%), Query Frame = -3
Query:  300 PVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSEIDELFKIFRVLGTPNEDTWPGVTSLPDFK------SAFPKWPSKELGT-VVRNLEPAGIDLLSKMLCMDPSRRITARSALEHEYFRDV 704
            P++ +T  VVTLWYRAPE+LL S  YSTP+DVWSVGCIFAE +   PLFPG SEIDEL +IF+ LGTPNE  WPG T LP  K      S F ++P  +L           G+ LL  +L  DP +R++A +AL+H +F+++
Sbjct:  713 PIKKYTSLVVTLWYRAPELLLCSPVYSTPIDVWSVGCIFAEFLQMLPLFPGKSEIDELNRIFKELGTPNEKIWPGYTELPAVKNMLSQNSQFTEYPVSQLRKHFQEKTSEMGLSLLQGLLTYDPKQRLSADAALKHGFFKEL 854          
BLAST of CX043372 vs. ExPASy Swiss-Prot
Match: CDK16_HUMAN (Cell division protein kinase 16 OS=Homo sapiens GN=CDK16 PE=1 SV=1)

HSP 1 Score: 142.895 bits (359), Expect = 1.608e-33
Identity = 67/134 (50.00%), Postives = 95/134 (70.90%), Query Frame = -3
Query:  309 IPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSEIDELFKIFRVLGTPNEDTWPGVTSLPDFKS-AFPKWPSKELGTVVRNLEPAGIDLLSKMLCMDPSRRITARSALEHEYF 707
            IP +T+++EVVTLWYR P+ILLGS  YST +D+W VGCIF EM   RPLFPG +  ++L  IFR+LGTP E+TWPG+ S  +FK+  +PK+ ++ L +    L+  G DLL+K+L  +   RI+A  A++H +F
Sbjct:  313 IPTKTYSNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNEEFKTYNYPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMKHPFF 446          
BLAST of CX043372 vs. ExPASy Swiss-Prot
Match: CDK11_RAT (Cell division protein kinase 11 OS=Rattus norvegicus GN=Cdk11 PE=2 SV=1)

HSP 1 Score: 142.895 bits (359), Expect = 1.608e-33
Identity = 70/139 (50.36%), Postives = 93/139 (66.91%), Query Frame = -3
Query:  303 PVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSEIDELFKIFRVLGTPNEDTWPGVTSLPDFKS-AFPKWP----SKELGTVVRNLEPAGIDLLSKMLCMDPSRRITARSALEHEYFRD 704
            P++ +T  VVTLWYRAPE+LLG++ YST  D+WSVGCIF E++ Q+PLFPG S+ID++ KIF+ +GTP+E  WPG + LP  K   F + P     K  G +   L   G DL++K L   P RRI A   L+HEYFR+
Sbjct:  231 PLKAYTPVVVTLWYRAPELLLGAKEYSTACDMWSVGCIFGELLTQKPLFPGKSDIDQINKIFKDIGTPSEKIWPGYSELPAVKKMTFSELPYNNLRKRFGAL---LSDQGFDLMNKFLTYYPGRRINAEDGLKHEYFRE 366          
BLAST of CX043372 vs. ExPASy Swiss-Prot
Match: CC2H1_TRYCO (Cell division control protein 2 homolog 1 OS=Trypanosoma congolense GN=CRK1 PE=3 SV=1)

HSP 1 Score: 142.51 bits (358), Expect = 2.100e-33
Identity = 72/149 (48.32%), Postives = 93/149 (62.42%), Query Frame = -3
Query:  294 IPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSEIDELFKIFRVLGTPNEDTWPGVTSLPDFKSAF--PKWPSKELGT---------VVRNLEPAGIDLLSKMLCMDPSRRITARSALEHEYFRDVEF 707
            IPV+ +THEVVTLWYR+P++LLGS  Y TPVD+WSVGCIFAEM    PLF G ++ D+L +IFR LGTP+   WP +   P+  +    P++    + T             L P GIDLL ++L  +P  R+TA  ALEH YF  VEF
Sbjct:  154 IPVKKYTHEVVTLWYRSPDVLLGSTQYGTPVDIWSVGCIFAEMAIGAPLFAGKNDADQLLRIFRFLGTPSSQVWPSMNLYPNSTNMLSKPEFQQNLIATCDEQFQTHPAYAKLGPQGIDLLRRLLRYEPGERLTAAQALEHPYF-SVEF 301          
BLAST of CX043372 vs. ExPASy Swiss-Prot
Match: CC2H1_TRYBB (Cell division control protein 2 homolog 1 OS=Trypanosoma brucei brucei GN=CRK1 PE=3 SV=1)

HSP 1 Score: 141.354 bits (355), Expect = 4.679e-33
Identity = 74/149 (49.66%), Postives = 92/149 (61.74%), Query Frame = -3
Query:  294 IPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSEIDELFKIFRVLGTPNEDTWP---------GVTSLPDFKSAFPKWPSKELGT--VVRNLEPAGIDLLSKMLCMDPSRRITARSALEHEYFRDVEF 707
            IPV+ FT EVVTLWYR+P++LLGS  Y TPVD+WSVGCIFAEM    PLF G ++ D+L +IF+ LGTPN   WP          + S P+F+        ++  T      L P GIDLL  +L  +PS R+TA  ALEH YF  VEF
Sbjct:  154 IPVKKFTQEVVTLWYRSPDVLLGSTQYGTPVDIWSVGCIFAEMAIGAPLFTGKNDADQLLRIFQFLGTPNRQVWPSMDTYPNSSNMLSRPEFQQTLAATCEEQFQTNPAYAKLGPQGIDLLRWLLRYEPSERLTAAQALEHPYF-SVEF 301          
BLAST of CX043372 vs. ExPASy Swiss-Prot
Match: YP62_CAEEL (Putative serine/threonine-protein kinase B0495.2 OS=Caenorhabditis elegans GN=B0495.2 PE=2 SV=1)

HSP 1 Score: 140.969 bits (354), Expect = 6.111e-33
Identity = 69/138 (50.00%), Postives = 93/138 (67.39%), Query Frame = -3
Query:  303 PVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSEIDELFKIFRVLGTPNEDTWPGVTSLPDFKS-AFPKWPSKELG---TVVRNLEPAGIDLLSKMLCMDPSRRITARSALEHEYFRD 704
            P++ FT  VVTLWYR+PE+LLG+R YSTPVD+WSVGCI AE +  +PLFPG  E++++ KIF  +GTP E  WPGVT L  +K+  F K+P  +L       R L   G  LL+ +L +DP  R +A  AL+HE+F +
Sbjct:  512 PLKKFTSIVVTLWYRSPELLLGTRLYSTPVDMWSVGCIMAEFILLKPLFPGRGELEQIKKIFMEMGTPTESIWPGVTELDGWKALTFEKYPYNQLRKRFLAGRLLNDTGFKLLNGLLTLDPKNRFSATQALDHEWFTE 649          
The following BLAST results are available for this feature:
BLAST of CX043372 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CKD18_RAT4.232e-3447.45Cell division protein kinase 18 OS=Rattus norvegic... [more]
PHO85_CANGA9.428e-3451.43Negative regulator of the PHO system OS=Candida gl... [more]
CDKG1_ORYSJ9.428e-3448.95Cyclin-dependent kinase G-1 OS=Oryza sativa subsp.... [more]
CDKG1_ORYSI9.428e-3448.95Cyclin-dependent kinase G-1 OS=Oryza sativa subsp.... [more]
KP58_DROME1.608e-3350.70Serine/threonine-protein kinase PITSLRE OS=Drosoph... [more]
CDK16_HUMAN1.608e-3350.00Cell division protein kinase 16 OS=Homo sapiens GN... [more]
CDK11_RAT1.608e-3350.36Cell division protein kinase 11 OS=Rattus norvegic... [more]
CC2H1_TRYCO2.100e-3348.32Cell division control protein 2 homolog 1 OS=Trypa... [more]
CC2H1_TRYBB4.679e-3349.66Cell division control protein 2 homolog 1 OS=Trypa... [more]
YP62_CAEEL6.111e-3350.00Putative serine/threonine-protein kinase B0495.2 O... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS07_10F05_b Parent Washington Navel Orange Thrip-Challenged Flavedo cDNA Library UCRCS07 Citrus sinensis cDNA clone UCRCS07-10F05-L10-1-7.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX043372 ID=CX043372; Name=CX043372; organism=Citrus sinensis; type=EST; length=709bp
TTTTTTTTTTTTTTTTTGAGTAATCGAACAACAAATTCAATTTGGTGTAT
TGCATATCAAATATTTAAAAGAAAAACTGGCACAAGCATTTATCCACAAG
ATCAAGAAAGCCGCGAATACACGATTACAAACTAGGCAAATCCAGAGATG
ACTGTAAAAAGCCATTCCATGTAGTAAGACTTTTCAGTAAAACTGCAAGT
AAAGACAGTCGGCAAATTTCGCAAACAATCAAAACCAAAGGCTTCACAAT
AATGTCAACACTCTAATAGCATATACAACAGATATTAGGGTACAAATTCG
ACGTCCCTGAAGTATTCATGTTCTAGAGCACTTCTGGCAGTAATTCTTCT
GCTTGGATCCATGCAGAGCATTTTAGAAAGGAGATCAATGCCAGCTGGCT
CAAGATTTCGAACAACAGTCCCCAACTCCTTAGAAGGCCATTTAGGAAAG
GCAGATTTAAAGTCAGGCAATGAAGTCACTCCGGGCCATGTGTCCTCATT
AGGTGTTCCCAAGACTCTGAAGATCTTGAATAACTCATCAATCTCAGAGT
CTCCTGGAAACAATGGCCGCTGGTTCACCATCTCAGCAAATATACATCCC
ACCGACCACACATCAACTGGAGTAGAGTAATGGCGAGATCCTAGTAATAT
TTCAGGTGCTCTGTACCACAATGTCACCACCTCATGTGTAAATGTCCTAA
CAGGAATAC
back to top