EY664954

Overview
NameEY664954
Unique NameEY664954
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length835
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY664954 vs. ExPASy Swiss-Prot
Match: G2OX1_PEA (Gibberellin 2-beta-dioxygenase 1 OS=Pisum sativum GN=GA2OX1 PE=1 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 9.285e-21
Identity = 62/198 (31.31%), Postives = 104/198 (52.53%), Query Frame = 1
Query:    7 R*VVAEYCTSVRGLVLRLLEAISESLGLQRDFIDKALGKHGQHMAL---NYYPPCPQPDLT----YGLPGHTDPNLITVLLQDDVPGLQV-LRNGKWLPVSPIPNTFIVNIGDQMQVLSNDRYKSVLHRALVNCDRERISIPTFYCPSPDAVIAPAKDLIDERHPAVYKNFTYAEYYQKFWNRGLDERCLDLFKASTA 576
            R ++ +Y  ++R +   +L+ ++E L +Q   +   L    Q   L   N+YP CP+  +      G   HTDP +I++L  ++  G Q+ LR+G W+ V P  ++F +N+GD +QV++N R+KSV HR L N    R+S+  F  P     IAP   L+  +  ++YK FT+ EY    +   L +  L  ++   A
Sbjct:  130 RGLLKDYKCAMRNMACEILDLMAEGLKIQPKNVFSKLVMDKQSDCLFRVNHYPACPELAINGENLIGFGEHTDPQIISILRSNNTSGFQISLRDGSWISVPPDHSSFFINVGDSLQVMTNGRFKSVRHRVLANGIDPRLSMIYFCGPPLSEKIAPLPSLMKGKE-SLYKEFTWFEYKSSTYGSRLADNRLGNYERIAA 326          
BLAST of EY664954 vs. ExPASy Swiss-Prot
Match: NCS1_COPJA (S-norcoclaurine synthase 1 OS=Coptis japonica GN=NCS1 PE=1 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 1.213e-20
Identity = 60/185 (32.43%), Postives = 103/185 (55.68%), Query Frame = 1
Query:    7 R*VVAEYCTSVRGLVLRLLEAISESLGLQRDFIDKALGK--HGQHMALNYYPPCPQPDLTYGLPGHTDPNLITVLLQ-DDVPGLQVLRNGKWLPVSPIPNTFIVNIGDQMQVLSNDRYKSVLHRALVNCDRERISIPTFYCPSPDAVIAPAKDLIDERHPAVYKNFTYAEYYQKFWNRGLDERCL 552
            R  + +Y   ++ + + L   ++++LGL+ + + K L    + +   L     C +     GL  H+D   +T+L+Q ++V GL + ++ KW+P+ PI   F+VNIGD ++++SN  YKS+ HRA++N D+ER+SI  F+ P     I P  DL+ E +   YK   Y +Y  +  N  LD + L
Sbjct:  166 RETMEKYSMELQKVAMCLTGMMAKNLGLESEILTKPLRTVFNREDELLPSMSSCGEG---LGLSPHSDATGLTLLIQVNEVNGLHIKKDEKWVPIKPILGAFVVNIGDVIEIMSNGIYKSIEHRAVINTDKERLSIAAFHDPEYGTKIGPLPDLVKE-NGVKYKTIDYEDYLIRSSNIKLDGKSL 346          
BLAST of EY664954 vs. ExPASy Swiss-Prot
Match: G2OX3_ARATH (Gibberellin 2-beta-dioxygenase 3 OS=Arabidopsis thaliana GN=GA2OX3 PE=2 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 3.528e-20
Identity = 61/192 (31.77%), Postives = 102/192 (53.12%), Query Frame = 1
Query:    7 R*VVAEYCTSVRGLVLRLLEAISESLGLQRDFIDKALGKHGQH---MALNYYPPCPQPDLT--YGLPGHTDPNLITVLLQDDVPGLQV-LRNGKWLPVSPIPNTFIVNIGDQMQVLSNDRYKSVLHRALVNCDRERISIPTFYCPSPDAVIAPAKDLIDERHPAVYKNFTYAEYYQKFWNRGLDERCLDLFK 564
            R  V EY   ++ +  + LE + E L ++       L K  +    + +N+YP   +  +    G   HTDP LI++L  +D  GLQ+ +++G W+ V+P  ++F V +GD +QV++N R+KSV HR + N  R RIS+  F  P     IAP   L+ ++   +Y  FT+++Y    +   L +  L LF+
Sbjct:  134 REAVEEYIKEMKRMSSKFLEMVEEELKIEPKEKLSRLVKVKESDSCLRMNHYPEKEETPVKEEIGFGEHTDPQLISLLRSNDTEGLQICVKDGTWVDVTPDHSSFFVLVGDTLQVMTNGRFKSVKHRVVTNTKRSRISMIYFAGPPLSEKIAPLSCLVPKQDDCLYNEFTWSQYKLSAYKTKLGDYRLGLFE 325          
BLAST of EY664954 vs. ExPASy Swiss-Prot
Match: G2OX7_ARATH (Gibberellin 2-beta-dioxygenase 7 OS=Arabidopsis thaliana GN=GA2OX7 PE=1 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 5.095e-19
Identity = 52/171 (30.41%), Postives = 84/171 (49.12%), Query Frame = 1
Query:    7 R*VVAEYCTSVRGLVLRLLEAISESLGLQRDFIDKALGKHGQHMALNYYPPCPQPDLTYGLPGHTDPNLITVLLQDDVPGLQVLRNGKWLPVSPIPNTFIVNIGDQMQVLSNDRYKSVLHRALVNCDRERISIPTFYCPSPDAVIAPAKDLIDERHPAVYKNFTYAEYYQK 519
            R +V  Y   +  +   + E + + + +  ++ +         + LN Y P       +GL  HTD + +T+L QD + GL++  NG+W+ V P      VNIGD  Q LSN  Y+SV HR +   + ER+SI  F CP  +  I    D     +P  Y+ F++ EY ++
Sbjct:  153 RTIVETYVQEIARVAQMICEILGKQVNVSSEYFENIFELENSFLRLNKYHPSVFGSEVFGLVPHTDTSFLTILSQDQIGGLELENNGQWISVKPCLEALTVNIGDMFQALSNGVYQSVRHRVISPANIERMSIAFFVCPYLETEI----DCFG--YPKKYRRFSFREYKEQ 317          
BLAST of EY664954 vs. ExPASy Swiss-Prot
Match: ISP7_SCHPO (Sexual differentiation process protein isp7 OS=Schizosaccharomyces pombe GN=isp7 PE=2 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.534e-15
Identity = 51/153 (33.33%), Postives = 79/153 (51.63%), Query Frame = 1
Query:    7 R*VVAEYCTSVRGLVLRLLEAISESLGLQRDFIDKALGKHGQHMALNYYPPCPQPDLTYGLPGHTDPNLITVLLQDDVPGLQVLR--NGKWLPVSPIPNTFIVNIGDQMQVLSNDRYKSVLHRALVNCDRERISIPTFYCPSPDAVIAPAKDL 459
            R  + +Y   +      ++  ++ESL L  D  D+        + L  YP  P      G+  HTD + +T++ QD+V GL++L   +  +L VSP P   I N+GD M +L+N+RYKS +HR   N   +R +IP F   + D V+AP   L
Sbjct:  216 RKALVKYHDQMLAFANHVMSLLAESLELSPDAFDEFCSDPTTSIRLLRYPSSPN---RLGVQEHTDADALTLMSQDNVKGLEILDPVSNCFLSVSPAPGALIANLGDIMAILTNNRYKSSMHRVCNNSGSDRYTIPFFLQGNIDYVVAPLPGL 365          
The following BLAST results are available for this feature:
BLAST of EY664954 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 85
Match NameE-valueIdentityDescription
G2OX1_PEA9.285e-2131.31Gibberellin 2-beta-dioxygenase 1 OS=Pisum sativum ... [more]
NCS1_COPJA1.213e-2032.43S-norcoclaurine synthase 1 OS=Coptis japonica GN=N... [more]
G2OX3_ARATH3.528e-2031.77Gibberellin 2-beta-dioxygenase 3 OS=Arabidopsis th... [more]
G2OX7_ARATH5.095e-1930.41Gibberellin 2-beta-dioxygenase 7 OS=Arabidopsis th... [more]
ISP7_SCHPO1.534e-1533.33Sexual differentiation process protein isp7 OS=Sch... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-072-D03-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY664954 ID=EY664954; Name=EY664954; organism=Citrus sinensis; type=EST; length=835bp
CTTGAAAGGTAAGTTGTGGCTGAGTACTGTACAAGTGTAAGAGGGTTAGT
GCTGAGGCTACTTGAGGCCATATCTGAGAGCTTGGGGCTTCAAAGGGATT
TTATAGACAAGGCATTAGGCAAACACGGGCAACATATGGCTTTGAACTAC
TATCCACCCTGTCCTCAGCCCGATCTAACTTATGGATTGCCAGGACACAC
TGATCCAAATTTAATAACTGTTCTTCTTCAGGATGATGTCCCTGGATTGC
AGGTACTTAGAAATGGGAAATGGCTTCCTGTCAGTCCTATTCCCAACACC
TTCATTGTCAACATCGGCGATCAGATGCAGGTTCTTAGCAATGATCGATA
CAAGAGTGTGCTCCATCGAGCTCTGGTGAATTGCGACAGGGAGCGCATAT
CCATTCCAACGTTCTATTGTCCGTCACCTGATGCTGTGATAGCTCCTGCT
AAGGATTTGATCGATGAACGTCACCCGGCTGTCTATAAAAATTTCACGTA
TGCTGAATATTACCAGAAATTTTGGAACAGGGGACTTGACGAACGTTGCT
TGGACCTGTTCAAAGCTTCAACTGCTTGATCTTGTCATTAATTATGTCTT
TGAAGATCAAATAGCTGAACGCTGCTTTCGACATGTTCAAAGCTTCATGC
TGCTTGATCTTATCATTATTATGTAGTTGGAGATCAAATTTCATTAGCTC
TAAATAATAATTGATCATATTTCAATCTGTATCAAACAACTNGCTANGTA
TAATTGNACTTCTAAATCTACTTTGTTTTAACCGTTTCAGATAATGATAT
TTTATATTTGCTGCTGAAAAAAAAAAAAAAAAGGG
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