CX043370

Overview
NameCX043370
Unique NameCX043370
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length807
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX043370 vs. ExPASy Swiss-Prot
Match: S35E1_DROME (Solute carrier family 35 member E1 homolog OS=Drosophila melanogaster GN=CG14621 PE=2 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 3.805e-24
Identity = 59/199 (29.65%), Postives = 113/199 (56.78%), Query Frame = 1
Query:  169 WYFLNVIFNILNKRIYNYFPYPYFVSVIHLLVGVVYC---LVSWAVGLPKRAPIDSKLLKLLIPVAVCHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASLTELSFNWTGFISAMISNISFTYRSIYSKKAM--TDMDSTNIYAYISIIALFVCIPPAIIVEGPQLIKH 750
            WY ++   N++ K + N FP+P  V+++ L    +Y       W +   +  P      +L++P+A+   L  VTS++S   V VS+ HT+KA  P F    ++   G++ P  ++LSL P++ GV +A++TE+SF+  G ISA+IS + F+ ++I+SKK +  T++    +   +  ++LF+ +P  + ++   + +H
Sbjct:   21 WYVISSSNNVIGKMVLNEFPFPMTVTLVQLCSITLYSGPFFNLWRIRKYQDIP-RPYYYRLIVPLALGKLLASVTSHISLWKVPVSYAHTVKATMPLFTVVLTRVFFGEKQPTLVYLSLLPIITGVGIATVTEISFDMMGLISALISTMGFSMQNIFSKKVLKDTNIHHLRLLHLLGKLSLFIFLPLWLYMDSFAVFRH 218          
BLAST of CX043370 vs. ExPASy Swiss-Prot
Match: S35E1_HUMAN (Solute carrier family 35 member E1 OS=Homo sapiens GN=SLC35E1 PE=1 SV=2)

HSP 1 Score: 100.523 bits (249), Expect = 1.146e-20
Identity = 71/240 (29.58%), Postives = 121/240 (50.42%), Query Frame = 1
Query:   67 ASSPAEGSDSAGEAAPVRFFDRYPALVTGFFFFMWYFLNVIFNILNKRIYNYFPYPYFVSVIHLLV---GVVYCLVSWAVGL--------PKRAPIDSKLL------KLLIPVAVCHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASLTELSFNWTGFISAMISNISFTYRSIYSKKAMTD--MDSTNIYAYISIIALFVCIPPAIIVE 729
            A   A G  +A  +   R   R  AL       +WY L+   N++NK I + FP+P  VS+ H+L    G+   L +W V          P   P    LL      + ++P+A       V+++VS   V VS+ HT+KA  P +    S+ I+ ++    ++LSL P++ GV +A++TELSF+  G +SA+ + + F+ ++I+SKK + D  +    +   +   A+F  IP  ++V+
Sbjct:    8 AGHGAGGPGAASSSGGAREGARVAALC-----LLWYALSAGGNVVNKVILSAFPFPVTVSLCHILALCAGLPPLLRAWRVPPAPPVSGPGPSPHPSSGPLLPPRFYPRYVLPLAFGKYFASVSAHVSIWKVPVSYAHTVKATMPIWVVLLSRIIMKEKQSTKVYLSLIPIISGVLLATVTELSFDMWGLVSALAATLCFSLQNIFSKKVLRDSRIHHLRLLNILGCHAVFFMIPTWVLVD 242          
BLAST of CX043370 vs. ExPASy Swiss-Prot
Match: S35E1_RAT (Solute carrier family 35 member E1 OS=Rattus norvegicus GN=Slc35e1 PE=3 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 1.954e-20
Identity = 63/207 (30.43%), Postives = 111/207 (53.62%), Query Frame = 1
Query:  166 MWYFLNVIFNILNKRIYNYFPYPYFVSVIHLLV---GVVYCLVSWAVGL--------PKRAPIDSKLL------KLLIPVAVCHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASLTELSFNWTGFISAMISNISFTYRSIYSKKAMTD--MDSTNIYAYISIIALFVCIPPAIIVE 729
            +WY L+   N++NK I + FP+P  VS+ H+L    G+   L +W V          P   P    LL      + ++P+A       V+++VS   V VS+ HT+KA  P +    S+ I+ ++    ++LSL P++ GV +A++TELSF+  G +SA+ + + F+ ++I+SKK + D  +    +   +   A+F  IP  ++V+
Sbjct:   36 LWYALSAGGNVVNKVILSAFPFPVTVSLCHILALCAGLPPLLRAWRVPPAPPVSGPGPSPHPASGPLLPPRFYPRYVLPLAFGKYFASVSAHVSIWKVPVSYAHTVKATMPIWVVLLSRIIMKEKQSTKVYLSLVPIISGVLLATVTELSFDVWGLVSALAATLCFSLQNIFSKKVLRDSRIHHLRLLNILGCHAVFFMIPTWVLVD 242          
BLAST of CX043370 vs. ExPASy Swiss-Prot
Match: S35E1_MOUSE (Solute carrier family 35 member E1 OS=Mus musculus GN=Slc35e1 PE=1 SV=2)

HSP 1 Score: 98.9821 bits (245), Expect = 3.334e-20
Identity = 63/207 (30.43%), Postives = 111/207 (53.62%), Query Frame = 1
Query:  166 MWYFLNVIFNILNKRIYNYFPYPYFVSVIHLLV---GVVYCLVSWAVGL--------PKRAPIDSKLL------KLLIPVAVCHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASLTELSFNWTGFISAMISNISFTYRSIYSKKAMTD--MDSTNIYAYISIIALFVCIPPAIIVE 729
            +WY L+   N++NK I + FP+P  VS+ H+L    G+   L +W V          P   P    LL      + ++P+A       V+++VS   V VS+ HT+KA  P +    S+ I+ ++    ++LSL P++ GV +A++TELSF+  G +SA+ + + F+ ++I+SKK + D  +    +   +   A+F  IP  ++V+
Sbjct:   36 LWYALSAGGNVVNKVILSAFPFPVTVSLCHILALCAGLPPLLRAWRVPPAPPVSGPGPGPHPASGPLLPPRFYPRYVLPLAFGKYFASVSAHVSIWKVPVSYAHTVKATMPIWVVLLSRIIMKEKQSTKVYLSLVPIISGVLLATVTELSFDVWGLVSALAATLCFSLQNIFSKKVLRDSRIHHLRLLNILGCHAVFFMIPTWVLVD 242          
BLAST of CX043370 vs. ExPASy Swiss-Prot
Match: S35E2_HUMAN (Solute carrier family 35 member E2 OS=Homo sapiens GN=SLC35E2 PE=2 SV=2)

HSP 1 Score: 75.8702 bits (185), Expect = 3.022e-13
Identity = 60/226 (26.55%), Postives = 109/226 (48.23%), Query Frame = 1
Query:  157 FFFMWYFLNVIFNILNKRIYNYFP-YPYFVSVIHLL----VGVVYCLVSWAVGLPK-RAPIDSKLLKLLIPVAVCHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASLTELSFNWTGFISAMISNISFTYRSIYSKKAMTD----MDSTNIYAYISIIALFVCIPPAI-IVEGPQLIKHGLSDAISKVGMVKFISD 801
            +  +W+F +     LNK I +     P  +  + +L    +G V  LV   +   K R       L  ++ V +      V   VS   VAVSF  T+K+  P F    S+ ILG+   L + LSL PV+ G+++ + TE+SFN  GF +A+ +NI    ++++SKK ++       +  +  Y S  A+ + +P  +   + P + + G S + ++  ++  ++D
Sbjct:   78 YLTLWFFFSFCTLFLNKYILSLLGGEPSMLGAVQMLSTTVIGCVKTLVPCCLYQHKARLSYPPNFLMTMLFVGLMRFATVVLGLVSLKNVAVSFAETVKSSAPIFTVIMSRMILGEYTGLLVNLSLIPVMGGLALCTATEISFNVLGFSAALSTNIMDCLQNVFSKKLLSGDKYRFSAPELQFYTSAAAVAMLVPARVFFTDVPVIGRSGKSFSYNQDVVLLLLTD 303          
BLAST of CX043370 vs. ExPASy Swiss-Prot
Match: S35E2_MOUSE (Solute carrier family 35 member E2 OS=Mus musculus GN=Slc35e2 PE=2 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 8.793e-13
Identity = 60/226 (26.55%), Postives = 108/226 (47.79%), Query Frame = 1
Query:  157 FFFMWYFLNVIFNILNKRIYNYFP-YPYFVSVIHLL----VGVVYCLVSWAVGLPK-RAPIDSKLLKLLIPVAVCHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASLTELSFNWTGFISAMISNISFTYRSIYSKKAMTD----MDSTNIYAYISIIALFVCIPP-AIIVEGPQLIKHGLSDAISKVGMVKFISD 801
            +  +W+F +     LNK I +     P  +  + +L    +G V   V   +   K R       +  ++ V +      V   VS   VAVSF  T+K+  P F    S+ ILG+   L + LSL PV+ G+++ + TE+SFN  GF +A+ +NI    ++++SKK ++       +  +  Y S  A+ + IP     ++ P + + G S + S+  ++  ++D
Sbjct:   78 YLTLWFFFSFCTLFLNKYILSLLEGEPSMLGAVQMLSTTLIGCVKIFVPCCLYQHKTRLSYPPNFIMTMLFVGLMRFATVVLGLVSLKNVAVSFAETVKSSAPIFTVIMSRMILGEYTGLLVNLSLIPVMGGLALCTATEISFNILGFSAALSTNIMDCLQNVFSKKLLSGDKYRFSAPELQFYTSAAAVALLIPAWTFFMDIPVIGRSGKSFSYSQDIVLLLLTD 303          
BLAST of CX043370 vs. ExPASy Swiss-Prot
Match: S35D2_HUMAN (UDP-N-acetylglucosamine/UDP-glucose/GDP-mannose transporter OS=Homo sapiens GN=SLC35D2 PE=1 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 7.444e-12
Identity = 53/220 (24.09%), Postives = 96/220 (43.64%), Query Frame = 1
Query:   64 TASSPAEGSDSAGEAAPVRFFDRYPALVTGFFFFMWYFLNVIFNILNKRIYNYFPYPYFVSVIHLLVGVVYCLVSWAVGLPKRAPIDSKLLKLLIPVAVCHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASLTELSFNWTGFISAMISNISFTYRSIYSKKAMTDMDSTNIYAYISIIALFVCIPPAII 723
            TA   AE   + GE    R   R   L++  F+    FL V+ N      Y  FP P F+ +  +   ++   VS    +      D K+   L P+ + +   H++   S + +++     ++             ILG+Q  L + LS+  +++G  +A+ ++L+FN  G+I   +++I      +Y+K+ M D      Y  +   A F+ IP  II
Sbjct:    2 TAGGQAEAEGAGGEPGAARLPSRVARLLSALFYGTCSFLIVLVNKALLTTYG-FPSPIFLGIGQMAATIMILYVSKLNKIIHFPDFDKKIPVKLFPLPLLYVGNHISGLSSTSKLSLPMFTVLRKFTIPLTLLLETIILGKQYSLNIILSVFAIILGAFIAAGSDLAFNLEGYIFVFLNDIFTAANGVYTKQKM-DPKELGKYGVLFYNACFMIIPTLII 219          
BLAST of CX043370 vs. ExPASy Swiss-Prot
Match: YG1B_SCHPO (Putative transporter C83.11 OS=Schizosaccharomyces pombe GN=SPBC83.11 PE=1 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 8.230e-11
Identity = 42/145 (28.97%), Postives = 68/145 (46.90%), Query Frame = 1
Query:  331 LLKLLIPVAVCHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASLTELSFNWTGFISAMISNISFTYRSIYSKKAMTDMDS-----------TNIYAYISIIALFVCIPPAIIVEG 732
            +L   +P+++    GHV  +++   + VS  HT+KAL P F   A +F+         + SL P+  GV++A   ELS +  G + A+IS   F  ++I+  K   +  S            N+  Y S +A  V IP  +  EG
Sbjct:   69 VLYTTLPLSIFQIGGHVFGSLATTKIPVSTVHTVKALSPLFTVLAYRFMFRHVYSAMTYFSLVPLTFGVTLACSFELSADIVGLLYALISTCIFVSQNIFGSKIFMEAKSHSTHTKKHYNKLNLLLYSSGVAFIVMIPVWLYQEG 213          
The following BLAST results are available for this feature:
BLAST of CX043370 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 18
Match NameE-valueIdentityDescription
S35E1_DROME3.805e-2429.65Solute carrier family 35 member E1 homolog OS=Dros... [more]
S35E1_HUMAN1.146e-2029.58Solute carrier family 35 member E1 OS=Homo sapiens... [more]
S35E1_RAT1.954e-2030.43Solute carrier family 35 member E1 OS=Rattus norve... [more]
S35E1_MOUSE3.334e-2030.43Solute carrier family 35 member E1 OS=Mus musculus... [more]
S35E2_HUMAN3.022e-1326.55Solute carrier family 35 member E2 OS=Homo sapiens... [more]
S35E2_MOUSE8.793e-1326.55Solute carrier family 35 member E2 OS=Mus musculus... [more]
S35D2_HUMAN7.444e-1224.09UDP-N-acetylglucosamine/UDP-glucose/GDP-mannose tr... [more]
YG1B_SCHPO8.230e-1128.97Putative transporter C83.11 OS=Schizosaccharomyces... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS07_10F04_b Parent Washington Navel Orange Thrip-Challenged Flavedo cDNA Library UCRCS07 Citrus sinensis cDNA clone UCRCS07-10F04-L8-1-7.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX043370 ID=CX043370; Name=CX043370; organism=Citrus sinensis; type=EST; length=807bp
AGCTCCAATGCTCCGGCTGGTCTTTTCGCCGGAAAGAAGGAGATTCTCCG
TCCAATCCTCGCCACCGCTTCTTCTCCTGCCGAAGGAAGCGATTCCGCCG
GAGAAGCTGCTCCGGTCAGATTCTTTGACAGGTATCCGGCCCTCGTGACC
GGGTTCTTCTTCTTCATGTGGTACTTCCTGAACGTGATATTCAACATTCT
TAACAAGAGGATTTACAATTACTTCCCATATCCTTATTTTGTGTCCGTTA
TTCATTTGTTGGTTGGGGTGGTTTACTGTTTGGTGAGCTGGGCTGTGGGC
CTTCCCAAGCGAGCTCCTATTGATTCAAAACTCCTGAAGCTCTTAATCCC
TGTTGCTGTGTGTCATGCATTGGGCCATGTTACCAGCAACGTGTCTTTTG
CAGCAGTTGCTGTCTCCTTTACCCATACCATCAAAGCTCTTGAGCCCTTC
TTCAACGCTGCTGCTTCACAATTCATTCTAGGCCAACAGTTACCTCTGAC
TCTGTGGCTGTCTCTTGCTCCTGTGGTTATTGGAGTGTCAATGGCATCAT
TGACTGAGCTGTCGTTCAATTGGACGGGCTTCATTAGTGCTATGATTTCC
AACATATCGTTTACTTACAGGAGTATCTACTCCAAGAAAGCCATGACTGA
TATGGACAGTACTAATATTTATGCCTATATTTCCATCATTGCGCTCTTTG
TCTGTATTCCACCAGCCATCATTGTTGAGGGACCTCAACTGATTAAGCAT
GGCTTAAGTGATGCAATTTCCAAAGTGGGCATGGTCAAGTTCATTTCAGA
TCTTTTT
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