EY664933

Overview
NameEY664933
Unique NameEY664933
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length536
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
EY664933_ssr297 microsatellite EY664933_ssr297:297..317. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig44 contig Csv1_Contig44:400..935. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY664933 vs. ExPASy Swiss-Prot
Match: PGK_SYNP2 (Phosphoglycerate kinase OS=Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) GN=pgk PE=3 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 7.345e-23
Identity = 56/80 (70.00%), Postives = 60/80 (75.00%), Query Frame = 2
Query:   32 GPI*VFEFDKFAVGTEAIAKKLADLSGKGVTTIIGGGDSXXXXXXXXXXXXMSHISTGGGASLELLEGKELPGVVALDEA 271
            GP+ VFEFDKFAVGTEAIAK LA  +  G  TIIGGGDS            MSHISTGGGASLELLEGKELPG+VALD+A
Sbjct:  319 GPMGVFEFDKFAVGTEAIAKTLAGATETGTVTIIGGGDSVAAVEKVGVADKMSHISTGGGASLELLEGKELPGIVALDDA 398          
BLAST of EY664933 vs. ExPASy Swiss-Prot
Match: PGK_SYNE7 (Phosphoglycerate kinase OS=Synechococcus elongatus (strain PCC 7942) GN=pgk PE=3 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 7.345e-23
Identity = 56/80 (70.00%), Postives = 61/80 (76.25%), Query Frame = 2
Query:   32 GPI*VFEFDKFAVGTEAIAKKLADLSGKGVTTIIGGGDSXXXXXXXXXXXXMSHISTGGGASLELLEGKELPGVVALDEA 271
            GP+ VFEFD+FAVGTEAIA+ LA L+ KG TTIIGGGDS            MSHISTGGGASLELLEGK LPGV ALD+A
Sbjct:  322 GPMGVFEFDQFAVGTEAIARSLAGLTRKGATTIIGGGDSVAAVEKVGVASEMSHISTGGGASLELLEGKVLPGVAALDDA 401          
BLAST of EY664933 vs. ExPASy Swiss-Prot
Match: PGK_SYNS3 (Phosphoglycerate kinase OS=Synechococcus sp. (strain CC9311) GN=pgk PE=3 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 1.253e-22
Identity = 56/80 (70.00%), Postives = 59/80 (73.75%), Query Frame = 2
Query:   32 GPI*VFEFDKFAVGTEAIAKKLADLSGKGVTTIIGGGDSXXXXXXXXXXXXMSHISTGGGASLELLEGKELPGVVALDEA 271
            GP+ VFEFDKFA GT AIA  LA+LSGKG  TIIGGGDS            MSHISTGGGASLELLEGK LPGV ALD+A
Sbjct:  322 GPMGVFEFDKFAAGTNAIATTLAELSGKGCCTIIGGGDSVAAVEKAGLAEKMSHISTGGGASLELLEGKVLPGVAALDDA 401          
BLAST of EY664933 vs. ExPASy Swiss-Prot
Match: PGK_MICAN (Phosphoglycerate kinase OS=Microcystis aeruginosa (strain NIES-843) GN=pgk PE=3 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 1.253e-22
Identity = 55/80 (68.75%), Postives = 59/80 (73.75%), Query Frame = 2
Query:   32 GPI*VFEFDKFAVGTEAIAKKLADLSGKGVTTIIGGGDSXXXXXXXXXXXXMSHISTGGGASLELLEGKELPGVVALDEA 271
            GP+ VFEFDKFA GT+AIA  LADL+  G TTIIGGGDS            MSHISTGGGASLELLEGK LPG+ ALDEA
Sbjct:  323 GPMGVFEFDKFAAGTDAIAHTLADLTATGTTTIIGGGDSVAAVEKVGVAEKMSHISTGGGASLELLEGKVLPGIAALDEA 402          
BLAST of EY664933 vs. ExPASy Swiss-Prot
Match: PGK_CYAP7 (Phosphoglycerate kinase OS=Cyanothece sp. (strain PCC 7424) GN=pgk PE=3 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 1.253e-22
Identity = 56/80 (70.00%), Postives = 59/80 (73.75%), Query Frame = 2
Query:   32 GPI*VFEFDKFAVGTEAIAKKLADLSGKGVTTIIGGGDSXXXXXXXXXXXXMSHISTGGGASLELLEGKELPGVVALDEA 271
            GP+ VFEFDKFA GTEAIA  L  L+GKG TTIIGGGDS            MSHISTGGGASLELLEGK LPG+ ALDEA
Sbjct:  322 GPMGVFEFDKFAKGTEAIAYTLETLTGKGATTIIGGGDSVAAVEKVGVADKMSHISTGGGASLELLEGKVLPGIAALDEA 401          
BLAST of EY664933 vs. ExPASy Swiss-Prot
Match: PGK_CYAP8 (Phosphoglycerate kinase OS=Cyanothece sp. (strain PCC 8801) GN=pgk PE=3 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 1.636e-22
Identity = 55/79 (69.62%), Postives = 59/79 (74.68%), Query Frame = 2
Query:   32 GPI*VFEFDKFAVGTEAIAKKLADLSGKGVTTIIGGGDSXXXXXXXXXXXXMSHISTGGGASLELLEGKELPGVVALDE 268
            GP+ VFEFDKFA GTEAIA  LA+L+GKG  TIIGGGDS            MSHISTGGGASLELLEGK LPG+ ALDE
Sbjct:  321 GPMGVFEFDKFAKGTEAIAHTLAELTGKGTITIIGGGDSVAAVEKVGVADKMSHISTGGGASLELLEGKVLPGIAALDE 399          
BLAST of EY664933 vs. ExPASy Swiss-Prot
Match: PGK_SYNSC (Phosphoglycerate kinase OS=Synechococcus sp. (strain CC9605) GN=pgk PE=3 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 2.137e-22
Identity = 56/80 (70.00%), Postives = 58/80 (72.50%), Query Frame = 2
Query:   32 GPI*VFEFDKFAVGTEAIAKKLADLSGKGVTTIIGGGDSXXXXXXXXXXXXMSHISTGGGASLELLEGKELPGVVALDEA 271
            GP+ VFEFDKFA GT +IA  LADLSGKG  TIIGGGDS            MSHISTGGGASLELLEGK LPGV ALD A
Sbjct:  322 GPMGVFEFDKFATGTNSIATTLADLSGKGCCTIIGGGDSVAAVEKAGLAEKMSHISTGGGASLELLEGKVLPGVAALDAA 401          
BLAST of EY664933 vs. ExPASy Swiss-Prot
Match: PGK_SYNR3 (Phosphoglycerate kinase OS=Synechococcus sp. (strain RCC307) GN=pgk PE=3 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 2.791e-22
Identity = 56/80 (70.00%), Postives = 58/80 (72.50%), Query Frame = 2
Query:   32 GPI*VFEFDKFAVGTEAIAKKLADLSGKGVTTIIGGGDSXXXXXXXXXXXXMSHISTGGGASLELLEGKELPGVVALDEA 271
            GP+ VFEFDKFA GT AIA  LA+LS KG  TIIGGGDS            MSHISTGGGASLELLEGK LPGV ALDEA
Sbjct:  322 GPMGVFEFDKFAAGTNAIATTLAELSAKGCCTIIGGGDSVAAVEKAGLAAQMSHISTGGGASLELLEGKVLPGVAALDEA 401          
BLAST of EY664933 vs. ExPASy Swiss-Prot
Match: PGK_THEEB (Phosphoglycerate kinase OS=Thermosynechococcus elongatus (strain BP-1) GN=pgk PE=3 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 3.645e-22
Identity = 53/80 (66.25%), Postives = 62/80 (77.50%), Query Frame = 2
Query:   32 GPI*VFEFDKFAVGTEAIAKKLADLSGKGVTTIIGGGDSXXXXXXXXXXXXMSHISTGGGASLELLEGKELPGVVALDEA 271
            GP+ VFEFD+FA GTEAIA+ LA+L+ +GV TIIGGGDS            MSHISTGGGASLELLEGK+LPG+ ALD+A
Sbjct:  321 GPMGVFEFDQFAKGTEAIARYLAELTSQGVCTIIGGGDSVAAVEKVGVADRMSHISTGGGASLELLEGKQLPGIAALDDA 400          
BLAST of EY664933 vs. ExPASy Swiss-Prot
Match: PGK_ANAVT (Phosphoglycerate kinase OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=pgk PE=3 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 6.218e-22
Identity = 54/80 (67.50%), Postives = 58/80 (72.50%), Query Frame = 2
Query:   32 GPI*VFEFDKFAVGTEAIAKKLADLSGKGVTTIIGGGDSXXXXXXXXXXXXMSHISTGGGASLELLEGKELPGVVALDEA 271
            GP+ VFEFDKFA GTEAIA  LA++   G TTIIGGGDS            MSHISTGGGASLELLEGK LPG+ ALDEA
Sbjct:  321 GPMGVFEFDKFAAGTEAIAHTLAEIGKTGTTTIIGGGDSVAAVEKVGLADQMSHISTGGGASLELLEGKVLPGIAALDEA 400          
The following BLAST results are available for this feature:
BLAST of EY664933 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 423
Match NameE-valueIdentityDescription
PGK_SYNP27.345e-2370.00Phosphoglycerate kinase OS=Synechococcus sp. (stra... [more]
PGK_SYNE77.345e-2370.00Phosphoglycerate kinase OS=Synechococcus elongatus... [more]
PGK_SYNS31.253e-2270.00Phosphoglycerate kinase OS=Synechococcus sp. (stra... [more]
PGK_MICAN1.253e-2268.75Phosphoglycerate kinase OS=Microcystis aeruginosa ... [more]
PGK_CYAP71.253e-2270.00Phosphoglycerate kinase OS=Cyanothece sp. (strain ... [more]
PGK_CYAP81.636e-2269.62Phosphoglycerate kinase OS=Cyanothece sp. (strain ... [more]
PGK_SYNSC2.137e-2270.00Phosphoglycerate kinase OS=Synechococcus sp. (stra... [more]
PGK_SYNR32.791e-2270.00Phosphoglycerate kinase OS=Synechococcus sp. (stra... [more]
PGK_THEEB3.645e-2266.25Phosphoglycerate kinase OS=Thermosynechococcus elo... [more]
PGK_ANAVT6.218e-2267.50Phosphoglycerate kinase OS=Anabaena variabilis (st... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-072-B04-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY664933 ID=EY664933; Name=EY664933; organism=Citrus sinensis; type=EST; length=536bp
TCCGNATTCCACAGCCCGACCCACGCGTCCGGGCCCAATTTGAGTGTTTG
AGTTTGACAAGTTCGCCGTTGGAACAGAGGCAATCGCAAAGAAGCTAGCA
GACCTCAGTGGCAAGGGCGTAACAACAATCATTGGAGGTGGAGACTCTGT
AGCCGCCGTTGAAAAAGTTGGAGTTGCCGGTGTCATGAGCCACATATCAA
CTGGTGGTGGTGCCAGTTTGGAGTTGTTGGAAGGCAAAGAGCTTCCAGGT
GTCGTTGCTCTTGATGAAGCTACACCAGTTGCCGTGTAAGATCAAAATTA
TTATTATTATTATTATTCTTTTTGGCCCACTTTTCAATGTGATTTATGTT
TGTAAACGAGAAATGAAAACCTTGTAGGAAGATATGAGTTCATCTTGTAA
ATTTTCACCTTTGTGATCAATGTATGGTCCCATTCTTGCTGAAATTGCTA
CCAATCACTGTATGGATAGGGCAAGCAGAGCCACCCAATCTTTTTCAAAT
AAATTGGCTATTTTCCTCAGTAAAAAAAAAAAAAAA
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