EY664933

Overview
NameEY664933
Unique NameEY664933
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length536
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
EY664933_ssr297 microsatellite EY664933_ssr297:297..317. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig44 contig Csv1_Contig44:400..935. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY664933 vs. ExPASy Swiss-Prot
Match: PGK_ANASP (Phosphoglycerate kinase OS=Anabaena sp. (strain PCC 7120) GN=pgk PE=1 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 6.218e-22
Identity = 54/80 (67.50%), Postives = 58/80 (72.50%), Query Frame = 2
Query:   32 GPI*VFEFDKFAVGTEAIAKKLADLSGKGVTTIIGGGDSXXXXXXXXXXXXMSHISTGGGASLELLEGKELPGVVALDEA 271
            GP+ VFEFDKFA GTEAIA  LA++   G TTIIGGGDS            MSHISTGGGASLELLEGK LPG+ ALDEA
Sbjct:  321 GPMGVFEFDKFAAGTEAIAHTLAEIGKTGTTTIIGGGDSVAAVEKVGLADQMSHISTGGGASLELLEGKVLPGIAALDEA 400          
BLAST of EY664933 vs. ExPASy Swiss-Prot
Match: PGK_SYNJA (Phosphoglycerate kinase OS=Synechococcus sp. (strain JA-3-3Ab) GN=pgk PE=3 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 8.121e-22
Identity = 53/80 (66.25%), Postives = 59/80 (73.75%), Query Frame = 2
Query:   32 GPI*VFEFDKFAVGTEAIAKKLADLSGKGVTTIIGGGDSXXXXXXXXXXXXMSHISTGGGASLELLEGKELPGVVALDEA 271
            GP+ VFEFD+FA GTEAIA+ LADL+  G  TIIGGGDS            M+HISTGGGASLELLEGKELPG+ AL EA
Sbjct:  333 GPMGVFEFDRFAAGTEAIARTLADLTQAGAITIIGGGDSVAAVEKVGLADKMTHISTGGGASLELLEGKELPGIAALSEA 412          
BLAST of EY664933 vs. ExPASy Swiss-Prot
Match: PGK_SYNS9 (Phosphoglycerate kinase OS=Synechococcus sp. (strain CC9902) GN=pgk PE=3 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 1.061e-21
Identity = 54/80 (67.50%), Postives = 57/80 (71.25%), Query Frame = 2
Query:   32 GPI*VFEFDKFAVGTEAIAKKLADLSGKGVTTIIGGGDSXXXXXXXXXXXXMSHISTGGGASLELLEGKELPGVVALDEA 271
            GP+ VFEFDKFA GT AIA  LA++ GKG  TIIGGGDS            MSHISTGGGASLELLEGK LPGV ALD A
Sbjct:  322 GPMGVFEFDKFAAGTNAIATTLAEIGGKGCCTIIGGGDSVAAVEKAGLAEKMSHISTGGGASLELLEGKVLPGVAALDNA 401          
BLAST of EY664933 vs. ExPASy Swiss-Prot
Match: PGK_SYNJB (Phosphoglycerate kinase OS=Synechococcus sp. GN=pgk PE=3 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 1.061e-21
Identity = 53/80 (66.25%), Postives = 60/80 (75.00%), Query Frame = 2
Query:   32 GPI*VFEFDKFAVGTEAIAKKLADLSGKGVTTIIGGGDSXXXXXXXXXXXXMSHISTGGGASLELLEGKELPGVVALDEA 271
            GP+ VFEFD+FA+GTEAIA+ LADL+  G TTIIGGGDS            M+HISTGGGASLELLEGK LPG+ AL EA
Sbjct:  333 GPMGVFEFDRFALGTEAIARTLADLTQAGATTIIGGGDSVAAVEKVGLADKMTHISTGGGASLELLEGKVLPGIAALTEA 412          
BLAST of EY664933 vs. ExPASy Swiss-Prot
Match: PGK_SYNY3 (Phosphoglycerate kinase OS=Synechocystis sp. (strain PCC 6803) GN=pgk PE=3 SV=2)

HSP 1 Score: 102.449 bits (254), Expect = 1.385e-21
Identity = 53/79 (67.09%), Postives = 58/79 (73.42%), Query Frame = 2
Query:   32 GPI*VFEFDKFAVGTEAIAKKLADLSGKGVTTIIGGGDSXXXXXXXXXXXXMSHISTGGGASLELLEGKELPGVVALDE 268
            GP+ VFEFDKFAVGTEAIA  LA+L+  G  TIIGGGDS            MSHISTGGGASLELLEGK LPG+ ALD+
Sbjct:  322 GPMGVFEFDKFAVGTEAIACSLAELTASGTVTIIGGGDSVAAVEKVGVAEKMSHISTGGGASLELLEGKVLPGIAALDD 400          
BLAST of EY664933 vs. ExPASy Swiss-Prot
Match: PGK_SYNPX (Phosphoglycerate kinase OS=Synechococcus sp. (strain WH8102) GN=pgk PE=3 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 1.385e-21
Identity = 54/80 (67.50%), Postives = 59/80 (73.75%), Query Frame = 2
Query:   32 GPI*VFEFDKFAVGTEAIAKKLADLSGKGVTTIIGGGDSXXXXXXXXXXXXMSHISTGGGASLELLEGKELPGVVALDEA 271
            GP+ VFEF+KFA GT AIA  LA+LSGKG  TIIGGGDS            MSHISTGGGASLELLEGK LPGV AL++A
Sbjct:  322 GPMGVFEFEKFATGTNAIATTLAELSGKGCCTIIGGGDSVAAVEKAGLADKMSHISTGGGASLELLEGKVLPGVAALNDA 401          
BLAST of EY664933 vs. ExPASy Swiss-Prot
Match: PGK_NOSP7 (Phosphoglycerate kinase OS=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) GN=pgk PE=3 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 1.385e-21
Identity = 53/80 (66.25%), Postives = 58/80 (72.50%), Query Frame = 2
Query:   32 GPI*VFEFDKFAVGTEAIAKKLADLSGKGVTTIIGGGDSXXXXXXXXXXXXMSHISTGGGASLELLEGKELPGVVALDEA 271
            GP+ VFEFDKFA GTEAIA  LA++   G TTIIGGGDS            MSHISTGGGASLELLEGK LPG+ ALD+A
Sbjct:  321 GPMGVFEFDKFAAGTEAIAHTLAEIGKTGTTTIIGGGDSVAAVEKVGLADQMSHISTGGGASLELLEGKVLPGIAALDDA 400          
BLAST of EY664933 vs. ExPASy Swiss-Prot
Match: PGK_SYNPW (Phosphoglycerate kinase OS=Synechococcus sp. (strain WH7803) GN=pgk PE=3 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 6.874e-21
Identity = 53/80 (66.25%), Postives = 58/80 (72.50%), Query Frame = 2
Query:   32 GPI*VFEFDKFAVGTEAIAKKLADLSGKGVTTIIGGGDSXXXXXXXXXXXXMSHISTGGGASLELLEGKELPGVVALDEA 271
            GP+ VFEF+KFA GT AIA  LA+LS KG  TIIGGGDS            MSHISTGGGASLELLEGK LPGV AL++A
Sbjct:  322 GPMGVFEFEKFATGTNAIATTLAELSAKGCCTIIGGGDSVAAVEKAGLAEKMSHISTGGGASLELLEGKVLPGVAALNDA 401          
BLAST of EY664933 vs. ExPASy Swiss-Prot
Match: PGK_PROMT (Phosphoglycerate kinase OS=Prochlorococcus marinus (strain NATL2A) GN=pgk PE=3 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 1.531e-20
Identity = 53/80 (66.25%), Postives = 58/80 (72.50%), Query Frame = 2
Query:   32 GPI*VFEFDKFAVGTEAIAKKLADLSGKGVTTIIGGGDSXXXXXXXXXXXXMSHISTGGGASLELLEGKELPGVVALDEA 271
            GP+ VFEF+KFA GT AIA  LA+LS +G  TIIGGGDS            MSHISTGGGASLELLEGK LPGV ALD+A
Sbjct:  322 GPMGVFEFEKFANGTNAIANTLAELSAQGCCTIIGGGDSVAAVEKAGLAKKMSHISTGGGASLELLEGKVLPGVSALDDA 401          
BLAST of EY664933 vs. ExPASy Swiss-Prot
Match: PGK_PROM1 (Phosphoglycerate kinase OS=Prochlorococcus marinus (strain NATL1A) GN=pgk PE=3 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 1.531e-20
Identity = 53/80 (66.25%), Postives = 58/80 (72.50%), Query Frame = 2
Query:   32 GPI*VFEFDKFAVGTEAIAKKLADLSGKGVTTIIGGGDSXXXXXXXXXXXXMSHISTGGGASLELLEGKELPGVVALDEA 271
            GP+ VFEF+KFA GT AIA  LA+LS +G  TIIGGGDS            MSHISTGGGASLELLEGK LPGV ALD+A
Sbjct:  322 GPMGVFEFEKFANGTNAIANTLAELSAQGCCTIIGGGDSVAAVEKAGLAKNMSHISTGGGASLELLEGKVLPGVSALDDA 401          
The following BLAST results are available for this feature:
BLAST of EY664933 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 423
Match NameE-valueIdentityDescription
PGK_ANASP6.218e-2267.50Phosphoglycerate kinase OS=Anabaena sp. (strain PC... [more]
PGK_SYNJA8.121e-2266.25Phosphoglycerate kinase OS=Synechococcus sp. (stra... [more]
PGK_SYNS91.061e-2167.50Phosphoglycerate kinase OS=Synechococcus sp. (stra... [more]
PGK_SYNJB1.061e-2166.25Phosphoglycerate kinase OS=Synechococcus sp. GN=pg... [more]
PGK_SYNY31.385e-2167.09Phosphoglycerate kinase OS=Synechocystis sp. (stra... [more]
PGK_SYNPX1.385e-2167.50Phosphoglycerate kinase OS=Synechococcus sp. (stra... [more]
PGK_NOSP71.385e-2166.25Phosphoglycerate kinase OS=Nostoc punctiforme (str... [more]
PGK_SYNPW6.874e-2166.25Phosphoglycerate kinase OS=Synechococcus sp. (stra... [more]
PGK_PROMT1.531e-2066.25Phosphoglycerate kinase OS=Prochlorococcus marinus... [more]
PGK_PROM11.531e-2066.25Phosphoglycerate kinase OS=Prochlorococcus marinus... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-072-B04-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY664933 ID=EY664933; Name=EY664933; organism=Citrus sinensis; type=EST; length=536bp
TCCGNATTCCACAGCCCGACCCACGCGTCCGGGCCCAATTTGAGTGTTTG
AGTTTGACAAGTTCGCCGTTGGAACAGAGGCAATCGCAAAGAAGCTAGCA
GACCTCAGTGGCAAGGGCGTAACAACAATCATTGGAGGTGGAGACTCTGT
AGCCGCCGTTGAAAAAGTTGGAGTTGCCGGTGTCATGAGCCACATATCAA
CTGGTGGTGGTGCCAGTTTGGAGTTGTTGGAAGGCAAAGAGCTTCCAGGT
GTCGTTGCTCTTGATGAAGCTACACCAGTTGCCGTGTAAGATCAAAATTA
TTATTATTATTATTATTCTTTTTGGCCCACTTTTCAATGTGATTTATGTT
TGTAAACGAGAAATGAAAACCTTGTAGGAAGATATGAGTTCATCTTGTAA
ATTTTCACCTTTGTGATCAATGTATGGTCCCATTCTTGCTGAAATTGCTA
CCAATCACTGTATGGATAGGGCAAGCAGAGCCACCCAATCTTTTTCAAAT
AAATTGGCTATTTTCCTCAGTAAAAAAAAAAAAAAA
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