EY664932

Overview
NameEY664932
Unique NameEY664932
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length769
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY664932 vs. ExPASy Swiss-Prot
Match: METK1_ACTCH (S-adenosylmethionine synthetase 1 OS=Actinidia chinensis GN=SAM1 PE=2 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 5.835e-11
Identity = 69/218 (31.65%), Postives = 90/218 (41.28%), Query Frame = 2
Query:   11 RAHMFGYXXXXXXXXXXXXXVLATKLGANLTEDEE*WDLGMADARWQ*HKGLSSTTMIM----GPWFLYRVHTELISTQHT*DLN**SDSRRSKATCHQSCHSRQLLR*QNYLAS*PHXXXXXXXXXXXXXXXXXRTIIIDTYSGWRAHCG*AVYEKMLPTQIETVLTSVGRPLTV-LVASGLYTRCIVNEYNASGMRDPKPLFVDS*GTSKIPDNEM 649
            + HMFGY             VLATKLGA LTE  +      +   W    G +  T+      G     RVHT LISTQH   +     +   K    +     Q L   N +                      R IIIDTY GW AH G A   K  PT+++     + R     +VASGL  RC+V    A G+ +P  +FVD+  T KI D ++
Sbjct:  123 QGHMFGYATDETPELMPLTHVLATKLGAKLTEVRK-----NSTCPWLRPDGKTQVTVEYRNEGGAMVPIRVHTVLISTQHDETVTNDQIANDLKKHVIKPVVPAQYLD-DNTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKD-PTKVDRSGAYIVRQAAKSVVASGLARRCLVQVSYAIGVAEPLSVFVDTYKTGKIADKDI 333          
BLAST of EY664932 vs. ExPASy Swiss-Prot
Match: METK1_TOBAC (S-adenosylmethionine synthetase 1 OS=Nicotiana tabacum GN=SAMS1 PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 7.621e-11
Identity = 69/218 (31.65%), Postives = 90/218 (41.28%), Query Frame = 2
Query:   11 RAHMFGYXXXXXXXXXXXXXVLATKLGANLTEDEE*WDLGMADARWQ*HKGLSSTTMIM----GPWFLYRVHTELISTQHT*DLN**SDSRRSKATCHQSCHSRQLLR*QNYLAS*PHXXXXXXXXXXXXXXXXXRTIIIDTYSGWRAHCG*AVYEKMLPTQIETVLTSVGRPLTV-LVASGLYTRCIVNEYNASGMRDPKPLFVDS*GTSKIPDNEM 649
            + HMFGY             V ATKLGA LTE  +          W    G +  T+      G     RVHT LISTQH   +     ++  K    +     Q L  +N +                      R IIIDTY GW AH G A   K  PT+++     + R     +VASGL  RCIV    A G+ +P  +FVD+  T  IPD ++
Sbjct:  123 QGHMFGYATDETPELMPLTHVWATKLGAKLTEVRK-----NKTCPWLRPDGKTQVTVEYKNDNGAMVPIRVHTVLISTQHDETVTNDQIAQDLKEHVIKPVIPSQYLD-ENTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKD-PTKVDRSGAYIVRQAAKSVVASGLARRCIVQVSYAIGVAEPLSVFVDTYKTGTIPDKDI 333          
The following BLAST results are available for this feature:
BLAST of EY664932 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 72
Match NameE-valueIdentityDescription
METK1_ACTCH5.835e-1131.65S-adenosylmethionine synthetase 1 OS=Actinidia chi... [more]
METK1_TOBAC7.621e-1131.65S-adenosylmethionine synthetase 1 OS=Nicotiana tab... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-072-B02-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY664932 ID=EY664932; Name=EY664932; organism=Citrus sinensis; type=EST; length=769bp
GCTGGCTTCCAGAGCTCACATGTTTGGTTACCCCACTGATGACACACCTG
ACACGCTGCCTACCACTGATGTGCTCGCAACAAAGCTGGGGGCTAACCTT
ACAGAAGATGAAGAATAGTGGGACCTGGGCATGGCTGATGCCAGATGGCA
ATAACACAAGGGACTGTCAAGCACTACAATGATAATGGGGCCATGGTTCC
TGTACCGTGTCCATACTGAGCTTATATCAACTCAGCACACATGAGACTTG
AACTAATGATCAGATAGCAGGAGATCTAAAGCCACATGTCATCAATCCTG
TCATTCCCGACAACTGCTGAGATAACAAAACTATCTGGCATCTTAACCAC
ATCTGGTCGCTATTGTATTAGTGGCCCTCACTGTGATATCTGTGCTCACT
GCCCGGACGATTATTATTGATACTTATAGCGGCTGGAGGGCACACTGCGG
ATGAGCTGTGTACGAAAAGATGCTACCAACGCAGATAGAAACTGTGCTTA
CATCAGTAGGCAGACCGCTAACAGTACTAGTGGCAAGTGGGCTATACACG
AGATGCATTGTCAATGAGTACAACGCTAGTGGTATGCGCGACCCAAAGCC
ACTTTTTGTAGATAGTTAAGGGACATCCAAGATCCCTGACAATGAAATGT
GGAAGAGTGTGACGAGAATATAGATCTTACGTCGGAGATGATTTCTATTA
TAACGATCTCAACAGGGACGTCACGGCAAGTTCATTGATACTTCGATGAT
CGGCACATCAGCTATATGA
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