EY664931

Overview
NameEY664931
Unique NameEY664931
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length767
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig5994 contig Csv1_Contig5994:206..972. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY664931 vs. ExPASy Swiss-Prot
Match: UBE2S_DROMO (Ubiquitin-conjugating enzyme E2 S OS=Drosophila mojavensis GN=GI11085 PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.167e-11
Identity = 38/96 (39.58%), Postives = 51/96 (53.12%), Query Frame = 1
Query:  103 IEGGKGTMYEGLSYKLSLRFPLDYPFKPPQVKFETMCFHPNVDQYGNICLDILHDKWSSAYDCRTILLSIQSLLGEPNPESPLNSYAAALLNNKED 390
            I+G  GT Y    +++ L    D+P  PP+  F T  FHPNV   G IC++ L   W      + ILL+I+ LL  PNPES LN  A  +L  + D
Sbjct:   50 IDGPAGTPYAVGIFRVKLTLSKDFPQTPPKAYFLTKIFHPNVAANGEICVNTLKKDWKPDLGIKHILLTIKCLLIVPNPESALNEEAGKMLLERYD 145          
BLAST of EY664931 vs. ExPASy Swiss-Prot
Match: UBE2S_DROWI (Ubiquitin-conjugating enzyme E2 S OS=Drosophila willistoni GN=GK16201 PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.525e-11
Identity = 38/96 (39.58%), Postives = 51/96 (53.12%), Query Frame = 1
Query:  103 IEGGKGTMYEGLSYKLSLRFPLDYPFKPPQVKFETMCFHPNVDQYGNICLDILHDKWSSAYDCRTILLSIQSLLGEPNPESPLNSYAAALLNNKED 390
            I+G  GT Y    +++ L    D+P  PP+  F T  FHPNV   G IC++ L   W      + ILL+I+ LL  PNPES LN  A  +L  + D
Sbjct:   50 IDGPAGTPYAIGVFRVKLTLSKDFPQTPPKAYFLTKIFHPNVAANGEICVNTLKKDWKPDLGIKHILLTIKCLLIVPNPESALNEEAGKMLLERYD 145          
BLAST of EY664931 vs. ExPASy Swiss-Prot
Match: UBE2S_DROPS (Ubiquitin-conjugating enzyme E2 S OS=Drosophila pseudoobscura pseudoobscura GN=GA22810 PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.525e-11
Identity = 38/96 (39.58%), Postives = 51/96 (53.12%), Query Frame = 1
Query:  103 IEGGKGTMYEGLSYKLSLRFPLDYPFKPPQVKFETMCFHPNVDQYGNICLDILHDKWSSAYDCRTILLSIQSLLGEPNPESPLNSYAAALLNNKED 390
            I+G  GT Y    +++ L    D+P  PP+  F T  FHPNV   G IC++ L   W      + ILL+I+ LL  PNPES LN  A  +L  + D
Sbjct:   50 IDGPAGTPYAVGIFRVKLTLSKDFPQTPPKAYFLTKIFHPNVAGNGEICVNTLKKDWKPDLGIKHILLTIKCLLIVPNPESALNEEAGKMLLERYD 145          
BLAST of EY664931 vs. ExPASy Swiss-Prot
Match: UBE2S_DROPE (Ubiquitin-conjugating enzyme E2 S OS=Drosophila persimilis GN=GL16001 PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.525e-11
Identity = 38/96 (39.58%), Postives = 51/96 (53.12%), Query Frame = 1
Query:  103 IEGGKGTMYEGLSYKLSLRFPLDYPFKPPQVKFETMCFHPNVDQYGNICLDILHDKWSSAYDCRTILLSIQSLLGEPNPESPLNSYAAALLNNKED 390
            I+G  GT Y    +++ L    D+P  PP+  F T  FHPNV   G IC++ L   W      + ILL+I+ LL  PNPES LN  A  +L  + D
Sbjct:   50 IDGPAGTPYAVGIFRVKLTLSKDFPQTPPKAYFLTKIFHPNVAGNGEICVNTLKKDWKPDLGIKHILLTIKCLLIVPNPESALNEEAGKMLLERYD 145          
BLAST of EY664931 vs. ExPASy Swiss-Prot
Match: UBC18_ARATH (Probable ubiquitin carrier protein E2 18 OS=Arabidopsis thaliana GN=UBC18 PE=2 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.525e-11
Identity = 34/96 (35.42%), Postives = 54/96 (56.25%), Query Frame = 1
Query:   76 ESIFTWIGTIEGGKGTMYEGLSYKLSLRFPLDYPFKPPQVKFETMC-FHPNVDQYGNICLDILHDKWSSAYDCRTILLSIQSLL-GEPNPESPLNS 357
            +++  W+  + G  GT+Y   +Y L + FP  YP + PQV F      HP++   G+ICLDIL+D WS A    ++ +SI S+L   P  + P ++
Sbjct:   41 DNLQKWVIEVTGAPGTLYANETYNLQVEFPQHYPMEAPQVIFVPPAPLHPHIYSNGHICLDILYDSWSPAMTVSSVCISILSMLSSSPEKQRPTDN 136          
BLAST of EY664931 vs. ExPASy Swiss-Prot
Match: UBC17_ARATH (Probable ubiquitin carrier protein E2 17 OS=Arabidopsis thaliana GN=UBC17 PE=2 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.525e-11
Identity = 34/84 (40.48%), Postives = 51/84 (60.71%), Query Frame = 1
Query:   76 ESIFTWIGTIEGGKGTMYEGLSYKLSLRFPLDYPFKPPQVKFETMC-FHPNVDQYGNICLDILHDKWSSAYDCRTILLSIQSLL 324
            +++  WI  + G  GT+Y   +Y+L + FP  YP + PQV F+     HP++   G+ICLD+L+D WS A    +I LSI S+L
Sbjct:   41 DNLQRWIIEVHGVPGTLYANETYQLQVEFPEHYPMEAPQVIFQHPAPLHPHIYSNGHICLDVLYDSWSPAMRLSSICLSILSML 124          
BLAST of EY664931 vs. ExPASy Swiss-Prot
Match: UBC12_KLULA (NEDD8-conjugating enzyme UBC12 OS=Kluyveromyces lactis GN=UBC12 PE=3 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.991e-11
Identity = 33/83 (39.76%), Postives = 48/83 (57.83%), Query Frame = 1
Query:  127 YEGLSYKLSLRFPLDYPFKPPQVKFETMCFHPNVDQYGNICLDILHDKWSSAYDCRTILLSIQSLLGEPNPESPLNSYAAALL 375
            Y G +Y  ++     YP +PP VK     +HPN+D  GN+CL++L + W+ A D ++I++ I  L  EPN   PLN  AA  L
Sbjct:   72 YAGGTYYFNVFIKDTYPMEPPVVKCMHRIYHPNIDIDGNVCLNLLREDWTPALDIQSIIIGILFLFHEPNGRDPLNKDAAKTL 154          
BLAST of EY664931 vs. ExPASy Swiss-Prot
Match: UB2L6_BOVIN (Ubiquitin/ISG15-conjugating enzyme E2 L6 OS=Bos taurus GN=UBE2L6 PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 2.601e-11
Identity = 34/97 (35.05%), Postives = 56/97 (57.73%), Query Frame = 1
Query:  127 YEGLSYKLSLRFPLDYPFKPPQVKFETMCFHPNVDQYGNICLDILHDK-WSSAYDCRTILLSIQSLLGEPNPESPLN-SYAAALLNNKEDYRKMVQK 411
            Y   +++L + FP +YPF+PP VKF T  +HPNVD+ G +CL I+  K W ++     +L ++  L+ +P P  P+    A  L  + E + +M Q+
Sbjct:   46 YNLKAFRLCISFPREYPFQPPTVKFTTRIYHPNVDRDGRVCLPIISKKNWKASTRTCQVLEALNMLVNQPEPGQPVRLELAEQLTQDPELFDQMAQE 142          
BLAST of EY664931 vs. ExPASy Swiss-Prot
Match: UBC15_ARATH (Ubiquitin-conjugating enzyme 15 OS=Arabidopsis thaliana GN=UBC15 PE=2 SV=2)

HSP 1 Score: 68.5514 bits (166), Expect = 4.436e-11
Identity = 34/96 (35.42%), Postives = 55/96 (57.29%), Query Frame = 1
Query:   76 ESIFTWIGTIEGGKGTMYEGLSYKLSLRFPLDYPFKPPQVKFETMC-FHPNVDQYGNICLDILHDKWSSAYDCRTILLSIQSLL-GEPNPESPLNS 357
            +++  W   + G  GT+Y   +Y+L + FP  YP + PQV F +    HP++   G+ICLDIL+D WS A    ++ +SI S+L   P  + P ++
Sbjct:   41 DNLQKWTIDVTGAPGTLYANETYQLQVEFPEHYPMEAPQVVFVSPAPSHPHIYSNGHICLDILYDSWSPAMTVNSVCISILSMLSSSPAKQRPADN 136          
BLAST of EY664931 vs. ExPASy Swiss-Prot
Match: UBC16_ARATH (Probable ubiquitin carrier protein E2 16 OS=Arabidopsis thaliana GN=UBC16 PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 7.567e-11
Identity = 34/84 (40.48%), Postives = 50/84 (59.52%), Query Frame = 1
Query:   76 ESIFTWIGTIEGGKGTMYEGLSYKLSLRFPLDYPFKPPQVKF-ETMCFHPNVDQYGNICLDILHDKWSSAYDCRTILLSIQSLL 324
            +++  WI  + G  GT+Y   +Y+L + FP  YP + PQV F      HP++   G+ICLDIL+D WS A    +I +SI S+L
Sbjct:   41 DNLQRWIIEVIGAPGTLYANDTYQLQVDFPEHYPMESPQVIFLHPAPLHPHIYSNGHICLDILYDSWSPAMTVSSICISILSML 124          
The following BLAST results are available for this feature:
BLAST of EY664931 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 230
Match NameE-valueIdentityDescription
UBE2S_DROMO1.167e-1139.58Ubiquitin-conjugating enzyme E2 S OS=Drosophila mo... [more]
UBE2S_DROWI1.525e-1139.58Ubiquitin-conjugating enzyme E2 S OS=Drosophila wi... [more]
UBE2S_DROPS1.525e-1139.58Ubiquitin-conjugating enzyme E2 S OS=Drosophila ps... [more]
UBE2S_DROPE1.525e-1139.58Ubiquitin-conjugating enzyme E2 S OS=Drosophila pe... [more]
UBC18_ARATH1.525e-1135.42Probable ubiquitin carrier protein E2 18 OS=Arabid... [more]
UBC17_ARATH1.525e-1140.48Probable ubiquitin carrier protein E2 17 OS=Arabid... [more]
UBC12_KLULA1.991e-1139.76NEDD8-conjugating enzyme UBC12 OS=Kluyveromyces la... [more]
UB2L6_BOVIN2.601e-1135.05Ubiquitin/ISG15-conjugating enzyme E2 L6 OS=Bos ta... [more]
UBC15_ARATH4.436e-1135.42Ubiquitin-conjugating enzyme 15 OS=Arabidopsis tha... [more]
UBC16_ARATH7.567e-1140.48Probable ubiquitin carrier protein E2 16 OS=Arabid... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-072-B01-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY664931 ID=EY664931; Name=EY664931; organism=Citrus sinensis; type=EST; length=767bp
CAAAGGCTTTATTAAGAATTGATGTCTCTTATGATGAGTGGAGGTGATCT
TGGGGTCTCGGCCTTTCCTGAAGGCGAGAGCATTTTCACTTGGATTGGCA
CAATCGAGGGTGGAAAGGGAACTATGTATGAGGGTTTATCATACAAACTT
TCTTTGCGTTTTCCTCTGGATTATCCTTTCAAGCCACCCCAAGTCAAGTT
TGAAACTATGTGCTTCCATCCAAATGTTGATCAGTATGGCAACATATGCC
TAGACATCCTTCATGACAAGTGGTCTTCAGCGTATGATTGCAGAACGATT
CTTTTGTCCATTCAAAGTTTACTGGGAGAGCCTAATCCAGAGAGCCCTCT
CAACAGCTATGCTGCAGCTCTGTTGAACAATAAGGAAGATTACAGAAAAA
TGGTCCAGAAACAGTACTTTGCTGGAGAATTTGAGAGCTAATTTGAACAG
CAAAACAGATACAAAATCGGATGTTAGGCTTCCACATTATTTCTCTGTAA
AGCTCAAGGGGAAGGGCTTGTTTCAGTTTGGAACTTGTTTCAATGAAAAC
TGATCTACATAAGTCTCATCATTGTCAGTACAGNTATTTACATTATACCC
AAAGGAATGGTACTCANGCTCTCGATAATTTCTCATTGTATAGCAAAAAT
AAAGTTACACCGTGTTGTAATTTTGTTTNGATCAAATGAAAGGNACTNCT
TTCTCATATGCAATTGGAGTGATACACTTCTGTTGGNTCNTATAAAAAAA
TNNAANATAAATAAAAA
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