EY664931

Overview
NameEY664931
Unique NameEY664931
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length767
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig5994 contig Csv1_Contig5994:206..972. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY664931 vs. ExPASy Swiss-Prot
Match: UBC1_COLGL (Ubiquitin-conjugating enzyme E2-16 kDa OS=Colletotrichum gloeosporioides GN=UBC1 PE=2 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 5.052e-23
Identity = 50/98 (51.02%), Postives = 65/98 (66.33%), Query Frame = 1
Query:   58 SAFPEGESIFTWIGTIEGGKGTMYEGLSYKLSLRFPLDYPFKPPQVKFETMCFHPNVDQYGNICLDILHDKWSSAYDCRTILLSIQSLLGEPNPESPL 351
            SA P GE +F W  TI G   + Y G  + L++ FP DYPFKPP+V F T  +HPN++  G+ICLDIL D+WS A     +LLSI S+L +PNP+ PL
Sbjct:   22 SAGPVGEDLFHWQATIMGPGDSPYSGGVFFLAIHFPTDYPFKPPKVNFTTRIYHPNINSNGSICLDILRDQWSPALTISKVLLSICSMLTDPNPDEPL 119          
BLAST of EY664931 vs. ExPASy Swiss-Prot
Match: UB2D3_RAT (Ubiquitin-conjugating enzyme E2 D3 OS=Rattus norvegicus GN=Ube2d3 PE=2 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 5.052e-23
Identity = 51/120 (42.50%), Postives = 72/120 (60.00%), Query Frame = 1
Query:   58 SAFPEGESIFTWIGTIEGGKGTMYEGLSYKLSLRFPLDYPFKPPQVKFETMCFHPNVDQYGNICLDILHDKWSSAYDCRTILLSIQSLLGEPNPESPLNSYAAALLNNKEDYRKMVQKQY 417
            SA P G+ +F W  TI G   + Y+G  + L++ FP DYPFKPP+V F T  +HPN++  G+ICLDIL  +WS A     +LLSI SLL +PNP+ PL    A +     D    + +++
Sbjct:   22 SAGPVGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSICLDILRSQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDRDKYNRISREW 141          
BLAST of EY664931 vs. ExPASy Swiss-Prot
Match: UB2D3_PONAB (Ubiquitin-conjugating enzyme E2 D3 OS=Pongo abelii GN=UBE2D3 PE=2 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 5.052e-23
Identity = 51/120 (42.50%), Postives = 72/120 (60.00%), Query Frame = 1
Query:   58 SAFPEGESIFTWIGTIEGGKGTMYEGLSYKLSLRFPLDYPFKPPQVKFETMCFHPNVDQYGNICLDILHDKWSSAYDCRTILLSIQSLLGEPNPESPLNSYAAALLNNKEDYRKMVQKQY 417
            SA P G+ +F W  TI G   + Y+G  + L++ FP DYPFKPP+V F T  +HPN++  G+ICLDIL  +WS A     +LLSI SLL +PNP+ PL    A +     D    + +++
Sbjct:   22 SAGPVGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSICLDILRSQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDRDKYNRISREW 141          
BLAST of EY664931 vs. ExPASy Swiss-Prot
Match: UB2D3_MOUSE (Ubiquitin-conjugating enzyme E2 D3 OS=Mus musculus GN=Ube2d3 PE=2 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 5.052e-23
Identity = 51/120 (42.50%), Postives = 72/120 (60.00%), Query Frame = 1
Query:   58 SAFPEGESIFTWIGTIEGGKGTMYEGLSYKLSLRFPLDYPFKPPQVKFETMCFHPNVDQYGNICLDILHDKWSSAYDCRTILLSIQSLLGEPNPESPLNSYAAALLNNKEDYRKMVQKQY 417
            SA P G+ +F W  TI G   + Y+G  + L++ FP DYPFKPP+V F T  +HPN++  G+ICLDIL  +WS A     +LLSI SLL +PNP+ PL    A +     D    + +++
Sbjct:   22 SAGPVGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSICLDILRSQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDRDKYNRISREW 141          
BLAST of EY664931 vs. ExPASy Swiss-Prot
Match: UB2D3_MACFA (Ubiquitin-conjugating enzyme E2 D3 OS=Macaca fascicularis GN=UBE2D3 PE=2 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 5.052e-23
Identity = 51/120 (42.50%), Postives = 72/120 (60.00%), Query Frame = 1
Query:   58 SAFPEGESIFTWIGTIEGGKGTMYEGLSYKLSLRFPLDYPFKPPQVKFETMCFHPNVDQYGNICLDILHDKWSSAYDCRTILLSIQSLLGEPNPESPLNSYAAALLNNKEDYRKMVQKQY 417
            SA P G+ +F W  TI G   + Y+G  + L++ FP DYPFKPP+V F T  +HPN++  G+ICLDIL  +WS A     +LLSI SLL +PNP+ PL    A +     D    + +++
Sbjct:   22 SAGPVGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSICLDILRSQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDRDKYNRISREW 141          
BLAST of EY664931 vs. ExPASy Swiss-Prot
Match: UB2D3_HUMAN (Ubiquitin-conjugating enzyme E2 D3 OS=Homo sapiens GN=UBE2D3 PE=1 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 5.052e-23
Identity = 51/120 (42.50%), Postives = 72/120 (60.00%), Query Frame = 1
Query:   58 SAFPEGESIFTWIGTIEGGKGTMYEGLSYKLSLRFPLDYPFKPPQVKFETMCFHPNVDQYGNICLDILHDKWSSAYDCRTILLSIQSLLGEPNPESPLNSYAAALLNNKEDYRKMVQKQY 417
            SA P G+ +F W  TI G   + Y+G  + L++ FP DYPFKPP+V F T  +HPN++  G+ICLDIL  +WS A     +LLSI SLL +PNP+ PL    A +     D    + +++
Sbjct:   22 SAGPVGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSICLDILRSQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDRDKYNRISREW 141          
BLAST of EY664931 vs. ExPASy Swiss-Prot
Match: UB2D2_PIG (Ubiquitin-conjugating enzyme E2 D2 OS=Sus scrofa GN=UBE2D2 PE=2 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 5.052e-23
Identity = 51/120 (42.50%), Postives = 72/120 (60.00%), Query Frame = 1
Query:   58 SAFPEGESIFTWIGTIEGGKGTMYEGLSYKLSLRFPLDYPFKPPQVKFETMCFHPNVDQYGNICLDILHDKWSSAYDCRTILLSIQSLLGEPNPESPLNSYAAALLNNKEDYRKMVQKQY 417
            SA P G+ +F W  TI G   + Y+G  + L++ FP DYPFKPP+V F T  +HPN++  G+ICLDIL  +WS A     +LLSI SLL +PNP+ PL    A +     D    + +++
Sbjct:   22 SAGPVGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSICLDILRSQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDRDKYNRISREW 141          
BLAST of EY664931 vs. ExPASy Swiss-Prot
Match: UBCD1_DROME (Ubiquitin-conjugating enzyme E2-17 kDa OS=Drosophila melanogaster GN=eff PE=1 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 8.618e-23
Identity = 52/119 (43.70%), Postives = 75/119 (63.03%), Query Frame = 1
Query:   58 SAFPEGESIFTWIGTIEGGKGTMYEGLSYKLSLRFPLDYPFKPPQVKFETMCFHPNVDQYGNICLDILHDKWSSAYDCRTILLSIQSLLGEPNPESPLNSYAAALL-NNKEDYRKMVQK 411
            SA P G+ +F W  TI G   + Y+G  + L++ FP DYPFKPP+V F T  +HPN++  G+ICLDIL  +WS A     +LLSI SLL +PNP+ PL    A +   ++E Y ++ ++
Sbjct:   22 SAGPVGDDLFHWQATIMGPPDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSICLDILRSQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDREKYNELARE 140          
BLAST of EY664931 vs. ExPASy Swiss-Prot
Match: UBC2_EMENI (Ubiquitin-conjugating enzyme E2 2 OS=Emericella nidulans GN=uvsJ PE=3 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 8.618e-23
Identity = 56/128 (43.75%), Postives = 77/128 (60.16%), Query Frame = 1
Query:   31 MMSGGDLGVSAFPEGESIFTWIGTIEGGKGTMYEGLSYKLSLRFPLDYPFKPPQVKFETMCFHPNVDQYGNICLDILHDKWSSAYDCRTILLSIQSLLGEPNPESPLNSYAAALL-NNKEDYRKMVQK 411
            M +    GVSA P  +++ TW   I G   T +E  +++L + F   YP KPP VKF +  FHPNV   G +CLDIL ++WS  YD   IL SIQSLL +PN  SP N  A+ L  +N+++Y K V++
Sbjct:   16 MQTDPPAGVSASPVADNVMTWNAVIIGPADTPFEDGTFRLVMHFEEQYPNKPPGVKFISQMFHPNVYGTGELCLDILQNRWSPTYDVAAILTSIQSLLNDPNTSSPANVEASNLYRDNRKEYIKRVRE 143          
BLAST of EY664931 vs. ExPASy Swiss-Prot
Match: UBC2_ASPFU (Ubiquitin-conjugating enzyme E2 2 OS=Aspergillus fumigatus GN=ubc2 PE=3 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 8.618e-23
Identity = 56/128 (43.75%), Postives = 77/128 (60.16%), Query Frame = 1
Query:   31 MMSGGDLGVSAFPEGESIFTWIGTIEGGKGTMYEGLSYKLSLRFPLDYPFKPPQVKFETMCFHPNVDQYGNICLDILHDKWSSAYDCRTILLSIQSLLGEPNPESPLNSYAAALL-NNKEDYRKMVQK 411
            M +    GVSA P  +++ TW   I G   T +E  +++L + F   YP KPP VKF +  FHPNV   G +CLDIL ++WS  YD   IL SIQSLL +PN  SP N  A+ L  +N+++Y K V++
Sbjct:   16 MQTDPPAGVSASPVADNVMTWNAVIIGPADTPFEDGTFRLVMHFEEQYPNKPPGVKFISQMFHPNVYGTGELCLDILQNRWSPTYDVAAILTSIQSLLNDPNTSSPANVEASNLYKDNRKEYIKRVRE 143          
The following BLAST results are available for this feature:
BLAST of EY664931 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 230
Match NameE-valueIdentityDescription
UBC1_COLGL5.052e-2351.02Ubiquitin-conjugating enzyme E2-16 kDa OS=Colletot... [more]
UB2D3_RAT5.052e-2342.50Ubiquitin-conjugating enzyme E2 D3 OS=Rattus norve... [more]
UB2D3_PONAB5.052e-2342.50Ubiquitin-conjugating enzyme E2 D3 OS=Pongo abelii... [more]
UB2D3_MOUSE5.052e-2342.50Ubiquitin-conjugating enzyme E2 D3 OS=Mus musculus... [more]
UB2D3_MACFA5.052e-2342.50Ubiquitin-conjugating enzyme E2 D3 OS=Macaca fasci... [more]
UB2D3_HUMAN5.052e-2342.50Ubiquitin-conjugating enzyme E2 D3 OS=Homo sapiens... [more]
UB2D2_PIG5.052e-2342.50Ubiquitin-conjugating enzyme E2 D2 OS=Sus scrofa G... [more]
UBCD1_DROME8.618e-2343.70Ubiquitin-conjugating enzyme E2-17 kDa OS=Drosophi... [more]
UBC2_EMENI8.618e-2343.75Ubiquitin-conjugating enzyme E2 2 OS=Emericella ni... [more]
UBC2_ASPFU8.618e-2343.75Ubiquitin-conjugating enzyme E2 2 OS=Aspergillus f... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-072-B01-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY664931 ID=EY664931; Name=EY664931; organism=Citrus sinensis; type=EST; length=767bp
CAAAGGCTTTATTAAGAATTGATGTCTCTTATGATGAGTGGAGGTGATCT
TGGGGTCTCGGCCTTTCCTGAAGGCGAGAGCATTTTCACTTGGATTGGCA
CAATCGAGGGTGGAAAGGGAACTATGTATGAGGGTTTATCATACAAACTT
TCTTTGCGTTTTCCTCTGGATTATCCTTTCAAGCCACCCCAAGTCAAGTT
TGAAACTATGTGCTTCCATCCAAATGTTGATCAGTATGGCAACATATGCC
TAGACATCCTTCATGACAAGTGGTCTTCAGCGTATGATTGCAGAACGATT
CTTTTGTCCATTCAAAGTTTACTGGGAGAGCCTAATCCAGAGAGCCCTCT
CAACAGCTATGCTGCAGCTCTGTTGAACAATAAGGAAGATTACAGAAAAA
TGGTCCAGAAACAGTACTTTGCTGGAGAATTTGAGAGCTAATTTGAACAG
CAAAACAGATACAAAATCGGATGTTAGGCTTCCACATTATTTCTCTGTAA
AGCTCAAGGGGAAGGGCTTGTTTCAGTTTGGAACTTGTTTCAATGAAAAC
TGATCTACATAAGTCTCATCATTGTCAGTACAGNTATTTACATTATACCC
AAAGGAATGGTACTCANGCTCTCGATAATTTCTCATTGTATAGCAAAAAT
AAAGTTACACCGTGTTGTAATTTTGTTTNGATCAAATGAAAGGNACTNCT
TTCTCATATGCAATTGGAGTGATACACTTCTGTTGGNTCNTATAAAAAAA
TNNAANATAAATAAAAA
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