EY664931

Overview
NameEY664931
Unique NameEY664931
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length767
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY664931 vs. ExPASy Swiss-Prot
Match: UBC31_ARATH (Probable ubiquitin carrier protein E2 31 OS=Arabidopsis thaliana GN=UBC31 PE=2 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 7.295e-22
Identity = 47/101 (46.53%), Postives = 64/101 (63.37%), Query Frame = 1
Query:   79 SIFTWIGTIEGGKGTMYEGLSYKLSLRFPLDYPFKPPQVKFETMCFHPNVDQYGNICLDILHDKWSSAYDCRTILLSIQSLLGEPNPESPLNSYAAALLNN 381
            +I+ W   I G  GT YEG  + LS++FP DYPFKPP+  F+T  +HPN++  G+IC++IL DKW+ A     +LLSI  LL +PNP+ PL      L  N
Sbjct:   35 NIYEWTAVIRGPDGTPYEGGMFNLSIKFPTDYPFKPPKFTFKTPIYHPNINDEGSICMNILKDKWTPALMVEKVLLSILLLLEKPNPDDPLVPEIGQLFKN 135          
BLAST of EY664931 vs. ExPASy Swiss-Prot
Match: UBC11_ARATH (Ubiquitin-conjugating enzyme E2 11 OS=Arabidopsis thaliana GN=UBC11 PE=2 SV=2)

HSP 1 Score: 104.375 bits (259), Expect = 7.295e-22
Identity = 49/98 (50.00%), Postives = 65/98 (66.33%), Query Frame = 1
Query:   58 SAFPEGESIFTWIGTIEGGKGTMYEGLSYKLSLRFPLDYPFKPPQVKFETMCFHPNVDQYGNICLDILHDKWSSAYDCRTILLSIQSLLGEPNPESPL 351
            SA P  E +F W  TI G   + Y G  + +S+ FP DYPFKPP+V F+T  +HPN++  G+ICLDIL ++WS A     +LLSI SLL +PNP+ PL
Sbjct:   22 SAGPVAEDMFHWQATIMGPPESPYAGGVFLVSIHFPPDYPFKPPKVSFKTKVYHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPL 119          
BLAST of EY664931 vs. ExPASy Swiss-Prot
Match: UB2E3_MOUSE (Ubiquitin-conjugating enzyme E2 E3 OS=Mus musculus GN=Ube2e3 PE=1 SV=2)

HSP 1 Score: 104.375 bits (259), Expect = 7.295e-22
Identity = 53/119 (44.54%), Postives = 74/119 (62.18%), Query Frame = 1
Query:   58 SAFPEGESIFTWIGTIEGGKGTMYEGLSYKLSLRFPLDYPFKPPQVKFETMCFHPNVDQYGNICLDILHDKWSSAYDCRTILLSIQSLLGEPNPESPL-NSYAAALLNNKEDYRKMVQK 411
            SA P+G++I+ W  TI G  G++YEG  + L + F  DYPFKPP+V F T  +H N++  G ICLDIL D WS A     +LLSI SLL + NP  PL  S A   L N+ ++ ++ ++
Sbjct:   82 SAGPKGDNIYEWRSTILGPPGSVYEGGVFFLDITFSSDYPFKPPKVTFRTRIYHCNINSQGVICLDILKDNWSPALTISKVLLSICSLLTDCNPADPLVGSIATQYLTNRAEHDRIARQ 200          
BLAST of EY664931 vs. ExPASy Swiss-Prot
Match: UB2E3_HUMAN (Ubiquitin-conjugating enzyme E2 E3 OS=Homo sapiens GN=UBE2E3 PE=1 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 7.295e-22
Identity = 53/119 (44.54%), Postives = 74/119 (62.18%), Query Frame = 1
Query:   58 SAFPEGESIFTWIGTIEGGKGTMYEGLSYKLSLRFPLDYPFKPPQVKFETMCFHPNVDQYGNICLDILHDKWSSAYDCRTILLSIQSLLGEPNPESPL-NSYAAALLNNKEDYRKMVQK 411
            SA P+G++I+ W  TI G  G++YEG  + L + F  DYPFKPP+V F T  +H N++  G ICLDIL D WS A     +LLSI SLL + NP  PL  S A   L N+ ++ ++ ++
Sbjct:   82 SAGPKGDNIYEWRSTILGPPGSVYEGGVFFLDITFSSDYPFKPPKVTFRTRIYHCNINSQGVICLDILKDNWSPALTISKVLLSICSLLTDCNPADPLVGSIATQYLTNRAEHDRIARQ 200          
BLAST of EY664931 vs. ExPASy Swiss-Prot
Match: UB2E3_BOVIN (Ubiquitin-conjugating enzyme E2 E3 OS=Bos taurus GN=UBE2E3 PE=2 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 7.295e-22
Identity = 53/119 (44.54%), Postives = 74/119 (62.18%), Query Frame = 1
Query:   58 SAFPEGESIFTWIGTIEGGKGTMYEGLSYKLSLRFPLDYPFKPPQVKFETMCFHPNVDQYGNICLDILHDKWSSAYDCRTILLSIQSLLGEPNPESPL-NSYAAALLNNKEDYRKMVQK 411
            SA P+G++I+ W  TI G  G++YEG  + L + F  DYPFKPP+V F T  +H N++  G ICLDIL D WS A     +LLSI SLL + NP  PL  S A   L N+ ++ ++ ++
Sbjct:   82 SAGPKGDNIYEWRSTILGPPGSVYEGGVFFLDITFSSDYPFKPPKVTFRTRIYHCNINSQGVICLDILKDNWSPALTISKVLLSICSLLTDCNPADPLVGSIATQYLTNRAEHDRIARQ 200          
BLAST of EY664931 vs. ExPASy Swiss-Prot
Match: UBC8_ARATH (Ubiquitin-conjugating enzyme E2 8 OS=Arabidopsis thaliana GN=UBC8 PE=1 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 9.528e-22
Identity = 49/98 (50.00%), Postives = 64/98 (65.31%), Query Frame = 1
Query:   58 SAFPEGESIFTWIGTIEGGKGTMYEGLSYKLSLRFPLDYPFKPPQVKFETMCFHPNVDQYGNICLDILHDKWSSAYDCRTILLSIQSLLGEPNPESPL 351
            SA P  E +F W  TI G   + Y G  + +++ FP DYPFKPP+V F T  FHPN++  G+ICLDIL ++WS A     +LLSI SLL +PNP+ PL
Sbjct:   22 SAGPVAEDMFHWQATIMGPAESPYSGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPL 119          
BLAST of EY664931 vs. ExPASy Swiss-Prot
Match: UBC4_YEAST (Ubiquitin-conjugating enzyme E2 4 OS=Saccharomyces cerevisiae GN=UBC4 PE=1 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 9.528e-22
Identity = 48/98 (48.98%), Postives = 64/98 (65.31%), Query Frame = 1
Query:   58 SAFPEGESIFTWIGTIEGGKGTMYEGLSYKLSLRFPLDYPFKPPQVKFETMCFHPNVDQYGNICLDILHDKWSSAYDCRTILLSIQSLLGEPNPESPL 351
            SA P G+ ++ W  +I G   + Y G  + LS+ FP DYPFKPP++ F T  +HPN++  GNICLDIL D+WS A     +LLSI SLL + NP+ PL
Sbjct:   23 SAGPVGDDLYHWQASIMGPADSPYAGGVFFLSIHFPTDYPFKPPKISFTTKIYHPNINANGNICLDILKDQWSPALTLSKVLLSICSLLTDANPDDPL 120          
BLAST of EY664931 vs. ExPASy Swiss-Prot
Match: UBC2_DEBHA (Ubiquitin-conjugating enzyme E2 2 OS=Debaryomyces hansenii GN=UBC2 PE=3 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 9.528e-22
Identity = 56/128 (43.75%), Postives = 76/128 (59.38%), Query Frame = 1
Query:   31 MMSGGDLGVSAFPEGESIFTWIGTIEGGKGTMYEGLSYKLSLRFPLDYPFKPPQVKFETMCFHPNVDQYGNICLDILHDKWSSAYDCRTILLSIQSLLGEPNPESPLNSYAAALL-NNKEDYRKMVQK 411
            M      GVSA P  +++ +W   I G   T +E  +++L L+F   YP KPP VKF +  FHPNV   G +CLDIL ++WS  YD  +IL SIQSLL +PN  SP N  AA L  +++  Y K V++
Sbjct:   16 MQQDAPSGVSASPLPDNVMSWNAVIIGPADTPFEDGTFRLILQFDEQYPNKPPSVKFISEMFHPNVYASGELCLDILQNRWSPTYDVSSILTSIQSLLNDPNISSPANVEAANLYKDHRSQYIKRVRE 143          
BLAST of EY664931 vs. ExPASy Swiss-Prot
Match: UBC10_ARATH (Ubiquitin-conjugating enzyme E2 10 OS=Arabidopsis thaliana GN=UBC10 PE=1 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 9.528e-22
Identity = 49/98 (50.00%), Postives = 64/98 (65.31%), Query Frame = 1
Query:   58 SAFPEGESIFTWIGTIEGGKGTMYEGLSYKLSLRFPLDYPFKPPQVKFETMCFHPNVDQYGNICLDILHDKWSSAYDCRTILLSIQSLLGEPNPESPL 351
            SA P  E +F W  TI G   + Y G  + +++ FP DYPFKPP+V F T  FHPN++  G+ICLDIL ++WS A     +LLSI SLL +PNP+ PL
Sbjct:   22 SAGPVAEDMFHWQATIMGPSESPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPL 119          
BLAST of EY664931 vs. ExPASy Swiss-Prot
Match: UBC2_NEUCR (Ubiquitin-conjugating enzyme E2 2 OS=Neurospora crassa GN=mus-8 PE=3 SV=3)

HSP 1 Score: 103.605 bits (257), Expect = 1.244e-21
Identity = 54/128 (42.19%), Postives = 76/128 (59.38%), Query Frame = 1
Query:   31 MMSGGDLGVSAFPEGESIFTWIGTIEGGKGTMYEGLSYKLSLRFPLDYPFKPPQVKFETMCFHPNVDQYGNICLDILHDKWSSAYDCRTILLSIQSLLGEPNPESPLNSYAAALL-NNKEDYRKMVQK 411
            M +    GVSA P  +++ TW   I G   T +E  +++L + F   YP KPP VKF +  FHPNV   G +CLDIL ++WS  YD   +L SIQSLL +PN  S  N  A+ L  +N+++Y K V++
Sbjct:   16 MQTDPPAGVSASPVPDNVMTWNAVIIGPADTPFEDGTFRLVMHFEEQYPNKPPSVKFISEMFHPNVYATGELCLDILQNRWSPTYDVAAVLTSIQSLLNDPNTGSRANVEASNLYKDNRKEYHKRVRE 143          
The following BLAST results are available for this feature:
BLAST of EY664931 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 230
Match NameE-valueIdentityDescription
UBC31_ARATH7.295e-2246.53Probable ubiquitin carrier protein E2 31 OS=Arabid... [more]
UBC11_ARATH7.295e-2250.00Ubiquitin-conjugating enzyme E2 11 OS=Arabidopsis ... [more]
UB2E3_MOUSE7.295e-2244.54Ubiquitin-conjugating enzyme E2 E3 OS=Mus musculus... [more]
UB2E3_HUMAN7.295e-2244.54Ubiquitin-conjugating enzyme E2 E3 OS=Homo sapiens... [more]
UB2E3_BOVIN7.295e-2244.54Ubiquitin-conjugating enzyme E2 E3 OS=Bos taurus G... [more]
UBC8_ARATH9.528e-2250.00Ubiquitin-conjugating enzyme E2 8 OS=Arabidopsis t... [more]
UBC4_YEAST9.528e-2248.98Ubiquitin-conjugating enzyme E2 4 OS=Saccharomyces... [more]
UBC2_DEBHA9.528e-2243.75Ubiquitin-conjugating enzyme E2 2 OS=Debaryomyces ... [more]
UBC10_ARATH9.528e-2250.00Ubiquitin-conjugating enzyme E2 10 OS=Arabidopsis ... [more]
UBC2_NEUCR1.244e-2142.19Ubiquitin-conjugating enzyme E2 2 OS=Neurospora cr... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-072-B01-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY664931 ID=EY664931; Name=EY664931; organism=Citrus sinensis; type=EST; length=767bp
CAAAGGCTTTATTAAGAATTGATGTCTCTTATGATGAGTGGAGGTGATCT
TGGGGTCTCGGCCTTTCCTGAAGGCGAGAGCATTTTCACTTGGATTGGCA
CAATCGAGGGTGGAAAGGGAACTATGTATGAGGGTTTATCATACAAACTT
TCTTTGCGTTTTCCTCTGGATTATCCTTTCAAGCCACCCCAAGTCAAGTT
TGAAACTATGTGCTTCCATCCAAATGTTGATCAGTATGGCAACATATGCC
TAGACATCCTTCATGACAAGTGGTCTTCAGCGTATGATTGCAGAACGATT
CTTTTGTCCATTCAAAGTTTACTGGGAGAGCCTAATCCAGAGAGCCCTCT
CAACAGCTATGCTGCAGCTCTGTTGAACAATAAGGAAGATTACAGAAAAA
TGGTCCAGAAACAGTACTTTGCTGGAGAATTTGAGAGCTAATTTGAACAG
CAAAACAGATACAAAATCGGATGTTAGGCTTCCACATTATTTCTCTGTAA
AGCTCAAGGGGAAGGGCTTGTTTCAGTTTGGAACTTGTTTCAATGAAAAC
TGATCTACATAAGTCTCATCATTGTCAGTACAGNTATTTACATTATACCC
AAAGGAATGGTACTCANGCTCTCGATAATTTCTCATTGTATAGCAAAAAT
AAAGTTACACCGTGTTGTAATTTTGTTTNGATCAAATGAAAGGNACTNCT
TTCTCATATGCAATTGGAGTGATACACTTCTGTTGGNTCNTATAAAAAAA
TNNAANATAAATAAAAA
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