EY664927

Overview
NameEY664927
Unique NameEY664927
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length691
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
EY664927_ssr396 microsatellite EY664927_ssr396:396..407. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig8839 contig Csv1_Contig8839:222..912. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY664927 vs. ExPASy Swiss-Prot
Match: HSP7C_ORYLA (Heat shock cognate 71 kDa protein OS=Oryzias latipes GN=hsc70 PE=2 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 5.268e-26
Identity = 54/114 (47.37%), Postives = 79/114 (69.30%), Query Frame = 3
Query:   36 KGRLCQRDLERMVREAEEFAEEDKKVKEKIDARNSLETYVYNMKNQINDNVFLADKLESDEKDKIETAVKEALEWLDDNHSAEKEDYEEKLKEVEAVCNPIITAVYQRSGGAPG 377
            KGRL + D+ERMV+EAE++  ED   ++K+ A+N LE+Y +NMK+ + D   LA K+  ++K KI     E + WLD N +AE+++Y  + KE+E VCNPIIT +YQ +GG PG
Sbjct:  505 KGRLSKEDIERMVQEAEKYKAEDDVQRDKVSAKNGLESYAFNMKSTVEDEK-LAGKISDEDKQKILDKCNEVISWLDKNQTAERDEYVHQQKELEKVCNPIITKLYQSAGGMPG 617          
BLAST of EY664927 vs. ExPASy Swiss-Prot
Match: HSP7C_ICTPU (Heat shock cognate 71 kDa protein OS=Ictalurus punctatus GN=hsc70 PE=2 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 5.268e-26
Identity = 54/114 (47.37%), Postives = 78/114 (68.42%), Query Frame = 3
Query:   36 KGRLCQRDLERMVREAEEFAEEDKKVKEKIDARNSLETYVYNMKNQINDNVFLADKLESDEKDKIETAVKEALEWLDDNHSAEKEDYEEKLKEVEAVCNPIITAVYQRSGGAPG 377
            KGRL + D+ERMV+EAE++  ED   ++K+ A+N LE+Y +NMK+ + D   L  K+  ++K KI     E + WLD N +AEK++YE + K++E VCNPIIT +YQ  GG PG
Sbjct:  507 KGRLSKEDIERMVQEAEKYKAEDDVQRDKVSAKNGLESYAFNMKSTVEDEK-LKGKISDEDKHKILDKCNEVISWLDKNQTAEKDEYEHQQKDLEKVCNPIITKLYQSDGGMPG 619          
BLAST of EY664927 vs. ExPASy Swiss-Prot
Match: HSP7C_DANRE (Heat shock cognate 71 kDa protein OS=Danio rerio GN=hspa8 PE=2 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 5.268e-26
Identity = 55/118 (46.61%), Postives = 80/118 (67.80%), Query Frame = 3
Query:   36 KGRLCQRDLERMVREAEEFAEEDKKVKEKIDARNSLETYVYNMKNQINDNVFLADKLESDEKDKIETAVKEALEWLDDNHSAEKEDYEEKLKEVEAVCNPIITAVYQRSGGAPGAGTE 389
            KGRL + D+ERMV+EAE++  ED   ++K+ A+N LE+Y +NMK+ + D   L  K+  ++K KI     E + WLD N +AE+E++E + KE+E VCNPIIT +YQ +GG PG   E
Sbjct:  507 KGRLSKEDIERMVQEAEKYKAEDDVQRDKVSAKNGLESYAFNMKSTVEDEK-LKGKISDEDKQKILDKCNEVIGWLDKNQTAEREEFEHQQKELEKVCNPIITKLYQSAGGMPGGMPE 623          
BLAST of EY664927 vs. ExPASy Swiss-Prot
Match: GRP78_PLAFA (78 kDa glucose-regulated protein homolog (Fragment) OS=Plasmodium falciparum PE=2 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 5.268e-26
Identity = 51/111 (45.95%), Postives = 85/111 (76.58%), Query Frame = 3
Query:   36 KGRLCQRDLERMVREAEEFAEEDKKVKEKIDARNSLETYVYNMKNQINDNVFLADKLESDEKDKIETAVKEALEWLDDNHSAEKEDYEEKLKEVEAVCNPIITAVYQRSGG 368
            KGRL +  +E+M+ +AE+FA+EDK ++EK++A+N+L+ Y+ +MK  + D   LADK+E ++K+ I +AVK+A +WL++N +A+ E  ++KLK++EAVC PII  +Y + GG
Sbjct:  153 KGRLSKEQIEKMINDAEKFADEDKNLREKVEAKNNLDNYIQSMKATVEDKDKLADKIEKEDKNTILSAVKDAEDWLNNNSNADSEALKQKLKDLEAVCQPIIVKLYGQPGG 263          
BLAST of EY664927 vs. ExPASy Swiss-Prot
Match: GRP78_PLAFO (78 kDa glucose-regulated protein homolog OS=Plasmodium falciparum (isolate NF54) PE=3 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 6.880e-26
Identity = 51/111 (45.95%), Postives = 84/111 (75.68%), Query Frame = 3
Query:   36 KGRLCQRDLERMVREAEEFAEEDKKVKEKIDARNSLETYVYNMKNQINDNVFLADKLESDEKDKIETAVKEALEWLDDNHSAEKEDYEEKLKEVEAVCNPIITAVYQRSGG 368
            KGRL +  +E+M+ +AE+FA+EDK ++EK++A+N L+ Y+ +MK  + D   LADK+E ++K+ I +AVK+A +WL++N +A+ E  ++KLK++EAVC PII  +Y + GG
Sbjct:  529 KGRLSKEQIEKMINDAEKFADEDKNLREKVEAKNKLDNYIQSMKATVEDKDKLADKIEKEDKNTILSAVKDAEDWLNNNSNADSEALKQKLKDLEAVCQPIIVKLYGQPGG 639          
BLAST of EY664927 vs. ExPASy Swiss-Prot
Match: HSP70_BLAEM (Heat shock 70 kDa protein OS=Blastocladiella emersonii GN=HSP70 PE=3 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 8.986e-26
Identity = 51/114 (44.74%), Postives = 81/114 (71.05%), Query Frame = 3
Query:   36 KGRLCQRDLERMVREAEEFAEEDKKVKEKIDARNSLETYVYNMKNQINDNVFLADKLESDEKDKIETAVKEALEWLDDNHSAEKEDYEEKLKEVEAVCNPIITAVYQRSGGAPG 377
            KGRL + ++ERMV EAE++ +ED++   +I A+N LE+Y YN++N +ND+  +A K+++ +K+ +  A+ E + WLD N    K++YE K KE+E V NPI+T +Y  +GGAPG
Sbjct:  510 KGRLSKEEIERMVAEAEKYKKEDEEAASRIQAKNGLESYAYNLRNTLNDDK-VAGKMDAADKETLNKAIDETISWLDGNQEGAKDEYEHKQKELEGVANPIMTKLYSAAGGAPG 622          
BLAST of EY664927 vs. ExPASy Swiss-Prot
Match: HSP7C_CAEEL (Heat shock 70 kDa protein C OS=Caenorhabditis elegans GN=hsp-3 PE=2 SV=2)

HSP 1 Score: 116.316 bits (290), Expect = 1.533e-25
Identity = 56/122 (45.90%), Postives = 83/122 (68.03%), Query Frame = 3
Query:   36 KGRLCQRDLERMVREAEEFAEEDKKVKEKIDARNSLETYVYNMKNQINDNVFLADKLESDEKDKIETAVKEALEWLDDNHSAEKEDYEEKLKEVEAVCNPIITAVYQRSGG----APGAGTE 389
            + RL   D+ERM+ +AE+FAE+DKKVK+K +ARN LE+Y YN+KNQI D   L  KL+ D+K  IE AV+EA+ WL  N  A  E+ +E+ K++E+   PI++ +Y+ +G     AP  G++
Sbjct:  535 QNRLSPEDIERMINDAEKFAEDDKKVKDKAEARNELESYAYNLKNQIEDKEKLGGKLDEDDKKTIEEAVEEAISWLGSNAEASAEELKEQKKDLESKVQPIVSKLYKDAGAGGEEAPEEGSD 656          
BLAST of EY664927 vs. ExPASy Swiss-Prot
Match: HSP7C_CAEBR (Heat shock 70 kDa protein C OS=Caenorhabditis briggsae GN=hsp-3 PE=3 SV=2)

HSP 1 Score: 116.316 bits (290), Expect = 1.533e-25
Identity = 57/114 (50.00%), Postives = 78/114 (68.42%), Query Frame = 3
Query:   36 KGRLCQRDLERMVREAEEFAEEDKKVKEKIDARNSLETYVYNMKNQINDNVFLADKLESDEKDKIETAVKEALEWLDDNHSAEKEDYEEKLKEVEAVCNPIITAVYQRSGGAPG 377
            + RL   D+ERM+ +AE+FAE+DKKVKEK +ARN LE+Y Y++KNQI D   L  KL+ D+K  IE AV EA+ WL  N  A  E+ +E+ KE+E    PI++ +Y + GGA G
Sbjct:  535 QNRLSPEDIERMINDAEKFAEDDKKVKEKAEARNELESYAYSLKNQIGDKEKLGGKLDEDDKKTIEEAVDEAISWLGSNADASAEELKEQKKELEGKVQPIVSKLY-KDGGAGG 647          
BLAST of EY664927 vs. ExPASy Swiss-Prot
Match: HSP7A_CAEEL (Heat shock 70 kDa protein A OS=Caenorhabditis elegans GN=hsp-1 PE=1 SV=2)

HSP 1 Score: 115.546 bits (288), Expect = 2.614e-25
Identity = 54/113 (47.79%), Postives = 80/113 (70.80%), Query Frame = 3
Query:   36 KGRLCQRDLERMVREAEEFAEEDKKVKEKIDARNSLETYVYNMKNQINDNVFLADKLESDEKDKIETAVKEALEWLDDNHSAEKEDYEEKLKEVEAVCNPIITAVYQRSGGAP 374
            KGRL + D+ERMV EAE++  +D+  K++I A+N LE+Y +N+K  I D   L DK+  ++K KIE    E L+WLD N +AEKE++E + K++E + NPII+ +YQ +GGAP
Sbjct:  508 KGRLSKDDIERMVNEAEKYKADDEAQKDRIGAKNGLESYAFNLKQTIEDEK-LKDKISPEDKKKIEDKCDEILKWLDSNQTAEKEEFEHQQKDLEGLANPIISKLYQSAGGAP 619          
BLAST of EY664927 vs. ExPASy Swiss-Prot
Match: HSP7C_CHICK (Heat shock cognate 71 kDa protein OS=Gallus gallus GN=HSPA8 PE=1 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 3.414e-25
Identity = 52/114 (45.61%), Postives = 80/114 (70.18%), Query Frame = 3
Query:   36 KGRLCQRDLERMVREAEEFAEEDKKVKEKIDARNSLETYVYNMKNQINDNVFLADKLESDEKDKIETAVKEALEWLDDNHSAEKEDYEEKLKEVEAVCNPIITAVYQRSGGAPG 377
            KGRL + D+ERMV+EAE++  ED+K ++K+ ++NSL++Y +NMK  + D       L+ D ++ ++    E + WLD N +AEKE++E + KE+E VCNPIIT +YQ +GG PG
Sbjct:  507 KGRLSKEDIERMVQEAEKYKAEDEKQRDKVSSKNSLDSYAFNMKATVEDEKLPGKILDEDHQNILDKC-NEIINWLDKNQTAEKEEFEHQQKELEKVCNPIITKLYQSAGGMPG 619          
The following BLAST results are available for this feature:
BLAST of EY664927 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 193
Match NameE-valueIdentityDescription
HSP7C_ORYLA5.268e-2647.37Heat shock cognate 71 kDa protein OS=Oryzias latip... [more]
HSP7C_ICTPU5.268e-2647.37Heat shock cognate 71 kDa protein OS=Ictalurus pun... [more]
HSP7C_DANRE5.268e-2646.61Heat shock cognate 71 kDa protein OS=Danio rerio G... [more]
GRP78_PLAFA5.268e-2645.9578 kDa glucose-regulated protein homolog (Fragment... [more]
GRP78_PLAFO6.880e-2645.9578 kDa glucose-regulated protein homolog OS=Plasmo... [more]
HSP70_BLAEM8.986e-2644.74Heat shock 70 kDa protein OS=Blastocladiella emers... [more]
HSP7C_CAEEL1.533e-2545.90Heat shock 70 kDa protein C OS=Caenorhabditis eleg... [more]
HSP7C_CAEBR1.533e-2550.00Heat shock 70 kDa protein C OS=Caenorhabditis brig... [more]
HSP7A_CAEEL2.614e-2547.79Heat shock 70 kDa protein A OS=Caenorhabditis eleg... [more]
HSP7C_CHICK3.414e-2545.61Heat shock cognate 71 kDa protein OS=Gallus gallus... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-072-A06-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY664927 ID=EY664927; Name=EY664927; organism=Citrus sinensis; type=EST; length=691bp
AATTCACGGCCCGACCCACGCGTCCGCACAAAGCTAAGGGTCGCCTGTGC
CAGAGAGACCTTGAGCGTATGGTTCGTGAGGCTGAAGAATTTGCCGAGGA
GGACAAGAAAGTAAAGGAGAAGATCGATGCTCGCAACAGCCTTGAGACCT
ATGTCTATAACATGAAAAACCAGATTAATGACAATGTTTTTCTTGCCGAC
AAGCTCGAATCTGATGAGAAGGACAAGATTGAAACTGCTGTAAAGGAAGC
CCTTGAATGGCTCGATGACAACCACAGCGCAGAGAAAGAGGACTATGAAG
AGAAGCTCAAGGAGGTTGAAGCCGTTTGCAACCCCATCATCACTGCTGTA
TATCAGAGATCTGGCGGAGCCCCCGGTGCTGGCACTGAATCATCGGATGA
TGATGATTCACACGATGAGCTCTAAAGAATTTTTACTTCGATTGACCATA
TTGCCAAAACTGTCAAGAGGCTAAAATTGAGTAAAATAGGCTTTTTAGAT
TATCTGAGGGTACTTACTGTAATTTTTCTCGTGGTAGGAGAAGTAAAAGG
GAGGCGGAATTTCCCTTTCTTCGCGTGTTTTTTTGGATGTGAAGATACTT
TAAAGGATCTTTTCTTATTTCATTACTAGTGTTTCCTTCAATATTAATGA
AACGTCTCCAAAGTCATTATTATAAAAAAAAAAAAAAAAAA
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