EY664927

Overview
NameEY664927
Unique NameEY664927
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length691
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
EY664927_ssr396 microsatellite EY664927_ssr396:396..407. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig8839 contig Csv1_Contig8839:222..912. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY664927 vs. ExPASy Swiss-Prot
Match: HSP71_SCHPO (Probable heat shock protein ssa1 OS=Schizosaccharomyces pombe GN=ssa1 PE=1 SV=2)

HSP 1 Score: 115.161 bits (287), Expect = 3.414e-25
Identity = 54/114 (47.37%), Postives = 84/114 (73.68%), Query Frame = 3
Query:   36 KGRLCQRDLERMVREAEEFAEEDKKVKEKIDARNSLETYVYNMKNQINDNVFLADKLESDEKDKIETAVKEALEWLDDNHSAEKEDYEEKLKEVEAVCNPIITAVYQRSGGAPG 377
            KGRL + +++RMV EAE++  ED+    +I A+N LE+Y Y+++N ++D   L DK+++ +K+ I+ AVKE +EWLD N +A K++YE+K KE+E V NPI+  +YQ +GGAPG
Sbjct:  505 KGRLSKEEIDRMVSEAEKYKAEDEAETSRIQAKNHLESYAYSLRNSLDDPN-LKDKVDASDKEAIDKAVKETIEWLDHNTTAAKDEYEDKQKELEGVANPIMAKIYQ-AGGAPG 616          
BLAST of EY664927 vs. ExPASy Swiss-Prot
Match: HSP70_TRYCR (Heat shock 70 kDa protein OS=Trypanosoma cruzi GN=HSP70 PE=3 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 5.824e-25
Identity = 58/113 (51.33%), Postives = 80/113 (70.80%), Query Frame = 3
Query:   36 KGRLCQRDLERMVREAEEFAEEDKKVKEKIDARNSLETYVYNMKNQIND-NVFLADKLESDEKDKIETAVKEALEWLDDNHSAEKEDYEEKLKEVEAVCNPIITAVYQRSGGA 371
            KGRL + ++ERMVREA ++  EDK    +IDA+N LE Y ++MKN +ND NV  A K+E  +K  I +AV+EALEWL++N  A KE+YE + KE+E +C PI+T +YQ   GA
Sbjct:  510 KGRLSRAEIERMVREAAKYEAEDKDQVRQIDAKNGLENYAFSMKNAVNDPNV--AGKIEEADKKTITSAVEEALEWLNNNQEASKEEYEHRQKELENLCTPIMTNMYQGMAGA 620          
BLAST of EY664927 vs. ExPASy Swiss-Prot
Match: HSP70_ACHKL (Heat shock 70 kDa protein OS=Achlya klebsiana GN=HSP70 PE=2 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 7.607e-25
Identity = 53/114 (46.49%), Postives = 78/114 (68.42%), Query Frame = 3
Query:   36 KGRLCQRDLERMVREAEEFAEEDKKVKEKIDARNSLETYVYNMKNQINDNVFLADKLESDEKDKIETAVKEALEWLDDNHSAEKEDYEEKLKEVEAVCNPIITAVYQRSGGAPG 377
            KGRL + D+ERMV+EAE++  ED+    +I+A+N LE Y YN++N +ND   L  K++  +K  I+  V + + WLD N SAEKE++E K KE+E + NPI+  +Y  +GGAPG
Sbjct:  510 KGRLTKDDIERMVQEAEKYKSEDEANNVRIEAKNGLENYAYNLRNTLNDEK-LQGKIDESDKKVIDDKVTDIINWLDHNQSAEKEEFEAKQKELEGIANPIMQKMYAAAGGAPG 622          
BLAST of EY664927 vs. ExPASy Swiss-Prot
Match: HSP74_TRYBB (Heat shock 70 kDa protein 4 OS=Trypanosoma brucei brucei PE=2 SV=2)

HSP 1 Score: 113.235 bits (282), Expect = 1.298e-24
Identity = 58/117 (49.57%), Postives = 78/117 (66.67%), Query Frame = 3
Query:   36 KGRLCQRDLERMVREAEEFAEEDKKVKEKIDARNSLETYVYNMKNQIND-NVFLADKLESDEKDKIETAVKEALEWLDDNHSAEKEDYEEKLKEVEAVCNPIITAVYQRSGGAPGAG 383
            KGRL + D+ERMV +A ++  EDK     IDA+N LE Y ++MKN IND NV  A KL+  +K+ + TAV+EAL WL+DN  A  E+Y  + KE+E VC PI++ +YQ  GG  G G
Sbjct:  510 KGRLSKADIERMVSDAAKYEAEDKAHVXXIDAKNGLENYAFSMKNTINDPNV--AGKLDDADKNAVTTAVEEALRWLNDNQEASLEEYNHRQKELEGVCAPILSKMYQGMGGGDGPG 624          
BLAST of EY664927 vs. ExPASy Swiss-Prot
Match: HSP71_CANFA (Heat shock 70 kDa protein 1 OS=Canis familiaris GN=HSPA1 PE=2 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 1.298e-24
Identity = 54/116 (46.55%), Postives = 82/116 (70.69%), Query Frame = 3
Query:   36 KGRLCQRDLERMVREAEEFAEEDKKVKEKIDARNSLETYVYNMKNQINDNVFLADKLESDEKDKIETAVKEALEWLDDNHSAEKEDYEEKLKEVEAVCNPIITAVYQRSGGAPGAG 383
            KGRL + ++ERMV+EAE++  ED+  ++++ A+N+LE+Y +NMK+ + D   L  K+   +K K+    +E + WLD N  AEK+++E K KE+E VCNPIIT +YQ +GG PGAG
Sbjct:  507 KGRLSKEEIERMVQEAEKYKAEDEVQRDRVSAKNALESYAFNMKSAVEDEG-LKGKISEADKKKVLDKCQEVISWLDANTLAEKDEFEHKRKELEQVCNPIITGLYQGAGG-PGAG 620          
BLAST of EY664927 vs. ExPASy Swiss-Prot
Match: HSP70_THEAN (Heat shock 70 kDa protein OS=Theileria annulata GN=TA11610 PE=3 SV=2)

HSP 1 Score: 113.235 bits (282), Expect = 1.298e-24
Identity = 53/114 (46.49%), Postives = 83/114 (72.81%), Query Frame = 3
Query:   36 KGRLCQRDLERMVREAEEFAEEDKKVKEKIDARNSLETYVYNMKNQINDNVFLADKLESDEKDKIETAVKEALEWLDDNHSAEKEDYEEKLKEVEAVCNPIITAVYQRSGGAPG 377
            KGRL Q +++RMV EAE++ EED+K +  +++R+ LE Y Y+MKN ++++  +  KL +DE D   + + +AL+W++ N  AE ++YE+KLK VE VCNP++T +YQ SG APG
Sbjct:  508 KGRLSQEEIDRMVEEAEKYKEEDEKRRRCVESRHKLENYCYSMKNTLSEDQ-VKQKLGADEVDSALSTITDALKWVEANQLAEHDEYEDKLKHVEGVCNPLVTKLYQ-SGAAPG 619          
BLAST of EY664927 vs. ExPASy Swiss-Prot
Match: HSP70_CHLRE (Heat shock 70 kDa protein OS=Chlamydomonas reinhardtii GN=HSP70 PE=2 SV=2)

HSP 1 Score: 113.235 bits (282), Expect = 1.298e-24
Identity = 55/119 (46.22%), Postives = 87/119 (73.11%), Query Frame = 3
Query:   36 KGRLCQRDLERMVREAEEFAEEDKKVKEKIDARNSLETYVYNMKNQINDNVFLADKLESDEKDKIETAVKEALEWLDDNHSAEKEDYEEKLKEVEAVCNPIITAVYQ---RSGGAPGAG 383
            KGRL + ++ERMV+EAE++  +D+++K K++A+NSLE Y YNM+N I ++  +A +L + +K+ +E A+  A++WL+ N  AE E++E  LKE+E +CNPIIT +YQ    +GG PG G
Sbjct:  513 KGRLSKDEIERMVQEAEKYKADDEQLK-KVEAKNSLENYAYNMRNTIREDK-VASQLSASDKESMEKALTAAMDWLEANQMAEVEEFEHHLKELEGLCNPIITRLYQGGAGAGGMPGGG 629          
BLAST of EY664927 vs. ExPASy Swiss-Prot
Match: GRP78_ASPNG (78 kDa glucose-regulated protein homolog OS=Aspergillus niger GN=bipA PE=2 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 1.695e-24
Identity = 57/114 (50.00%), Postives = 80/114 (70.18%), Query Frame = 3
Query:   36 KGRLCQRDLERMVREAEEFAEEDKKVKEKIDARNSLETYVYNMKNQINDNVFLADKLESDEKDKIETAVKEALEWLDDN-HSAEKEDYEEKLKEVEAVCNPIITAVYQRSGGAP 374
            KGRL Q +++RMV EAEEFAEEDK +K KI+ARN+LE Y +++KNQ+ND   L  +++ D+K  I  AVKE  EWL+DN  +A  ED+EE+ +++  V  PI + +Y   G AP
Sbjct:  549 KGRLSQEEIDRMVAEAEEFAEEDKAIKAKIEARNTLENYAFSLKNQVNDENGLGGQIDEDDKQTILDAVKEVTEWLEDNAATATTEDFEEQKEQLSNVAYPITSKLY---GSAP 659          
BLAST of EY664927 vs. ExPASy Swiss-Prot
Match: GRP78_ASPKA (78 kDa glucose-regulated protein homolog OS=Aspergillus kawachi GN=bipA PE=3 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 1.695e-24
Identity = 57/114 (50.00%), Postives = 80/114 (70.18%), Query Frame = 3
Query:   36 KGRLCQRDLERMVREAEEFAEEDKKVKEKIDARNSLETYVYNMKNQINDNVFLADKLESDEKDKIETAVKEALEWLDDN-HSAEKEDYEEKLKEVEAVCNPIITAVYQRSGGAP 374
            KGRL Q +++RMV EAEEFAEEDK +K KI+ARN+LE Y +++KNQ+ND   L  +++ D+K  I  AVKE  EWL+DN  +A  ED+EE+ +++  V  PI + +Y   G AP
Sbjct:  549 KGRLSQEEIDRMVAEAEEFAEEDKAIKAKIEARNTLENYAFSLKNQVNDENGLGGQIDEDDKQTILDAVKEVTEWLEDNAATATTEDFEEQKEQLSNVAYPITSKLY---GSAP 659          
BLAST of EY664927 vs. ExPASy Swiss-Prot
Match: GRP78_ASPAW (78 kDa glucose-regulated protein homolog OS=Aspergillus awamori GN=bipA PE=2 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 1.695e-24
Identity = 57/114 (50.00%), Postives = 80/114 (70.18%), Query Frame = 3
Query:   36 KGRLCQRDLERMVREAEEFAEEDKKVKEKIDARNSLETYVYNMKNQINDNVFLADKLESDEKDKIETAVKEALEWLDDN-HSAEKEDYEEKLKEVEAVCNPIITAVYQRSGGAP 374
            KGRL Q +++RMV EAEEFAEEDK +K KI+ARN+LE Y +++KNQ+ND   L  +++ D+K  I  AVKE  EWL+DN  +A  ED+EE+ +++  V  PI + +Y   G AP
Sbjct:  549 KGRLSQEEIDRMVAEAEEFAEEDKAIKAKIEARNTLENYAFSLKNQVNDENGLGGQIDEDDKQTILDAVKEVTEWLEDNAATATTEDFEEQKEQLSNVAYPITSKLY---GSAP 659          
The following BLAST results are available for this feature:
BLAST of EY664927 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 193
Match NameE-valueIdentityDescription
HSP71_SCHPO3.414e-2547.37Probable heat shock protein ssa1 OS=Schizosaccharo... [more]
HSP70_TRYCR5.824e-2551.33Heat shock 70 kDa protein OS=Trypanosoma cruzi GN=... [more]
HSP70_ACHKL7.607e-2546.49Heat shock 70 kDa protein OS=Achlya klebsiana GN=H... [more]
HSP74_TRYBB1.298e-2449.57Heat shock 70 kDa protein 4 OS=Trypanosoma brucei ... [more]
HSP71_CANFA1.298e-2446.55Heat shock 70 kDa protein 1 OS=Canis familiaris GN... [more]
HSP70_THEAN1.298e-2446.49Heat shock 70 kDa protein OS=Theileria annulata GN... [more]
HSP70_CHLRE1.298e-2446.22Heat shock 70 kDa protein OS=Chlamydomonas reinhar... [more]
GRP78_ASPNG1.695e-2450.0078 kDa glucose-regulated protein homolog OS=Asperg... [more]
GRP78_ASPKA1.695e-2450.0078 kDa glucose-regulated protein homolog OS=Asperg... [more]
GRP78_ASPAW1.695e-2450.0078 kDa glucose-regulated protein homolog OS=Asperg... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-072-A06-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY664927 ID=EY664927; Name=EY664927; organism=Citrus sinensis; type=EST; length=691bp
AATTCACGGCCCGACCCACGCGTCCGCACAAAGCTAAGGGTCGCCTGTGC
CAGAGAGACCTTGAGCGTATGGTTCGTGAGGCTGAAGAATTTGCCGAGGA
GGACAAGAAAGTAAAGGAGAAGATCGATGCTCGCAACAGCCTTGAGACCT
ATGTCTATAACATGAAAAACCAGATTAATGACAATGTTTTTCTTGCCGAC
AAGCTCGAATCTGATGAGAAGGACAAGATTGAAACTGCTGTAAAGGAAGC
CCTTGAATGGCTCGATGACAACCACAGCGCAGAGAAAGAGGACTATGAAG
AGAAGCTCAAGGAGGTTGAAGCCGTTTGCAACCCCATCATCACTGCTGTA
TATCAGAGATCTGGCGGAGCCCCCGGTGCTGGCACTGAATCATCGGATGA
TGATGATTCACACGATGAGCTCTAAAGAATTTTTACTTCGATTGACCATA
TTGCCAAAACTGTCAAGAGGCTAAAATTGAGTAAAATAGGCTTTTTAGAT
TATCTGAGGGTACTTACTGTAATTTTTCTCGTGGTAGGAGAAGTAAAAGG
GAGGCGGAATTTCCCTTTCTTCGCGTGTTTTTTTGGATGTGAAGATACTT
TAAAGGATCTTTTCTTATTTCATTACTAGTGTTTCCTTCAATATTAATGA
AACGTCTCCAAAGTCATTATTATAAAAAAAAAAAAAAAAAA
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