EY664926

Overview
NameEY664926
Unique NameEY664926
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length865
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY664926 vs. ExPASy Swiss-Prot
Match: UBP12_SCHPO (Probable ubiquitin carboxyl-terminal hydrolase 12 OS=Schizosaccharomyces pombe GN=ubp12 PE=1 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 1.923e-35
Identity = 63/161 (39.13%), Postives = 90/161 (55.90%), Query Frame = 1
Query:  187 NLYDAXXXXXXXXXXXYWRNHRARNDSIIVDLCQGQYRSMLVCPVCNKVSVTFDPLMYLSLPIPSTTMRTMTVTVLSTDGSSMPAPFTVTV-PKYGRFQDLIDALSTKCFLRNHEKLLVAEIYRSKIFRVLDEPS-DLLGLIRDEDKLVAYRLPKDSETPS 663
            +LY+             WR H+ RNDS+IVDL QG YRS LVCPVCN VS+TFDP M L+LP+P   + + TVT +  D +  P    V +  K    +DL+  ++ K    ++ K+LV E Y+ + +R L + S  LL  I +ED++  Y L +  E  S
Sbjct:  431 DLYEVDEEKIKNTAEECWRLHKLRNDSLIVDLFQGMYRSTLVCPVCNTVSITFDPFMDLTLPLPVKQVWSHTVTFIPADTNLTPLAIEVVLESKAATIEDLVKYVAEKSGCSDYRKILVTETYKGRFYRFLTQLSKSLLMEISEEDEIYLYELERPYEDGS 591          

HSP 2 Score: 58.9214 bits (141), Expect = 1.923e-35
Identity = 27/39 (69.23%), Postives = 29/39 (74.36%), Query Frame = 3
Query:   66 LANFAPQFSGYNQHDSQEFLAFLLDGLHEDLNRVKCKPY 182
            +  F   F GY Q DSQEFLAFLLDGLHEDLNR+  KPY
Sbjct:  388 IGKFNHSFLGYGQQDSQEFLAFLLDGLHEDLNRIYQKPY 426          
BLAST of EY664926 vs. ExPASy Swiss-Prot
Match: UBP15_MOUSE (Ubiquitin carboxyl-terminal hydrolase 15 OS=Mus musculus GN=Usp15 PE=2 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 5.534e-35
Identity = 51/127 (40.16%), Postives = 74/127 (58.27%), Query Frame = 1
Query:  238 WRNHRARNDSIIVDLCQGQYRSMLVCPVCNKVSVTFDPLMYLSLPIPSTTMRTMTVTVLSTDGSSMPAPFTVTVPKYGRFQDLIDALSTKCFLRNHEKLLVAEIYRSKIFRVLDEPSDLLGLIRDED 618
            W NH  RNDSIIVD+  G ++S LVCP C K+SVTFDP  YL+LP+P    R++ V ++  D  + P  + V VPK G   DL  ALS    +   +K++V +IY  +  R+     +L  ++  +D
Sbjct:  423 WENHLKRNDSIIVDIFHGLFKSTLVCPECAKISVTFDPFCYLTLPLPMKKERSLEVYLVRMDPLAKPMQYKVIVPKIGNILDLCTALSALSGV-PADKMIVTDIYNHRFHRIFAVDENLSSIMERDD 548          

HSP 2 Score: 68.5514 bits (166), Expect = 5.534e-35
Identity = 31/50 (62.00%), Postives = 36/50 (72.00%), Query Frame = 3
Query:   39 VAPICSNYPLANFAPQFSGYNQHDSQEFLAFLLDGLHEDLNRVKCKPYLE 188
            V P      +  FAPQFSGY Q D QE LAFLLDGLHEDLNR++ KPY++
Sbjct:  357 VTPRAFKTQVGRFAPQFSGYQQQDCQELLAFLLDGLHEDLNRIRKKPYIQ 406          
BLAST of EY664926 vs. ExPASy Swiss-Prot
Match: UBP11_MOUSE (Ubiquitin carboxyl-terminal hydrolase 11 OS=Mus musculus GN=Usp11 PE=2 SV=3)

HSP 1 Score: 102.449 bits (254), Expect = 7.213e-35
Identity = 52/134 (38.81%), Postives = 77/134 (57.46%), Query Frame = 1
Query:  238 WRNHRARNDSIIVDLCQGQYRSMLVCPVCNKVSVTFDPLMYLSLPIPSTTMRTMTVTVLSTDGSSMPAPFTVTVPKYGRFQDLIDALSTKCFLRNHEKLLVAEIYRSKIFRVLDEPSDLLGLIRDEDKLVAYRL 639
            W+NH+ RNDS+IVD   G ++S LVCP C  VSVTFDP  YLS+P+P  + R + V  +  D    P    V VPK G   DL  ALST   +   +K++VA+++  + +++      L G++ D D +  Y +
Sbjct:  391 WQNHKRRNDSVIVDTFHGLFKSTLVCPDCGNVSVTFDPFCYLSVPLPVCSRRVLEVFFVPMDPRRKPEQHRVVVPKKGNISDLCVALSTHTSVA-PDKMIVADVFSHRFYKLYQLEDPLSGIL-DRDDIFVYEV 522          

HSP 2 Score: 66.6254 bits (161), Expect = 7.213e-35
Identity = 33/53 (62.26%), Postives = 40/53 (75.47%), Query Frame = 3
Query:   30 RNLVAPICSNYPLANFAPQFSGYNQHDSQEFLAFLLDGLHEDLNRVKCKPYLE 188
            R++V  +  N  + +FA QF GY QHDSQE L+FLLDGLHEDLNRVK K Y+E
Sbjct:  323 RSIVPNVFKN-KVGHFASQFLGYQQHDSQELLSFLLDGLHEDLNRVKKKEYVE 374          
BLAST of EY664926 vs. ExPASy Swiss-Prot
Match: UBP11_HUMAN (Ubiquitin carboxyl-terminal hydrolase 11 OS=Homo sapiens GN=USP11 PE=1 SV=3)

HSP 1 Score: 100.908 bits (250), Expect = 2.075e-34
Identity = 53/136 (38.97%), Postives = 80/136 (58.82%), Query Frame = 1
Query:  238 WRNHRARNDSIIVDLCQGQYRSMLVCPVCNKVSVTFDPLMYLSLPIPSTTMRTMTVTVLSTDGSSMPAPFTVTVPKYGRFQDLIDALSTKCFLRNHEKLLVAEIYRSKIFRV--LDEPSDLLGLIRDEDKLVAYRL 639
            W+NH+ RNDS+IVD   G ++S LVCP C  VSVTFDP  YLS+P+P +  R + V  +  D    P    + VPK G+  DL  ALS    + + E+++VA+++  + +++  L+EP   L  I D D +  Y +
Sbjct:  443 WQNHKRRNDSVIVDTFHGLFKSTLVCPDCGNVSVTFDPFCYLSVPLPISHKRVLEVFFIPMDPRRKPEQHRLVVPKKGKISDLCVALSKHTGI-SPERMMVADVFSHRFYKLYQLEEP---LSSILDRDDIFVYEV 574          

HSP 2 Score: 66.6254 bits (161), Expect = 2.075e-34
Identity = 33/53 (62.26%), Postives = 40/53 (75.47%), Query Frame = 3
Query:   30 RNLVAPICSNYPLANFAPQFSGYNQHDSQEFLAFLLDGLHEDLNRVKCKPYLE 188
            R++V  +  N  + +FA QF GY QHDSQE L+FLLDGLHEDLNRVK K Y+E
Sbjct:  375 RSIVPHVFKN-KVGHFASQFLGYQQHDSQELLSFLLDGLHEDLNRVKKKEYVE 426          
BLAST of EY664926 vs. ExPASy Swiss-Prot
Match: UBP19_HUMAN (Ubiquitin carboxyl-terminal hydrolase 19 OS=Homo sapiens GN=USP19 PE=1 SV=2)

HSP 1 Score: 97.0561 bits (240), Expect = 1.711e-33
Identity = 54/135 (40.00%), Postives = 80/135 (59.26%), Query Frame = 1
Query:  238 WRNHRARNDSIIVDLCQGQYRSMLVCPVCNKVSVTFDPLMYLSLPIPSTTMRTMTVTVLSTDGSSMPAPFTVTVPK-YGRFQDLIDALSTKCFLRNHEKLLVAEIYRSKIFRVLDEPSDLLGLIRDEDKLVAYRL 639
            W+ H+ RNDS IVDL QGQY+S LVCPVC KVS+TFDP +YL +P+P    + + V   + +  S P  F V+V K      +++D+LS    ++  E L +AE+ +++  RV   PS  L  +   D L+ + L
Sbjct:  631 WQRHKMRNDSFIVDLFQGQYKSKLVCPVCAKVSITFDPFLYLPVPLPQ-KQKVLPVFYFAREPHSKPIKFLVSVSKENSTASEVLDSLSQSVHVK-PENLRLAEVIKNRFHRVF-LPSHSLDTVSPSDTLLCFEL 762          

HSP 2 Score: 67.3958 bits (163), Expect = 1.711e-33
Identity = 29/43 (67.44%), Postives = 38/43 (88.37%), Query Frame = 3
Query:   66 LANFAPQFSGYNQHDSQEFLAFLLDGLHEDLNRVKCKPYLESI 194
            +A+ A QF+GY QHD+QEF+AFLLDGLHEDLNR++ KPY E++
Sbjct:  574 VASKASQFTGYAQHDAQEFMAFLLDGLHEDLNRIQNKPYTETV 616          
BLAST of EY664926 vs. ExPASy Swiss-Prot
Match: UBP19_MOUSE (Ubiquitin carboxyl-terminal hydrolase 19 OS=Mus musculus GN=Usp19 PE=2 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 2.901e-33
Identity = 57/155 (36.77%), Postives = 90/155 (58.06%), Query Frame = 1
Query:  238 WRNHRARNDSIIVDLCQGQYRSMLVCPVCNKVSVTFDPLMYLSLPIPSTTMRTMTVTVLSTDGSSMPAPFTVTVPK-YGRFQDLIDALSTKCFLRNHEKLLVAEIYRSKIFRVLDEPSDLLGLIRDEDKLVAYRL--PKDSETPSLVLFMHDRXE 693
            W+ H+ RNDS IVDL QGQY+S LVCPVC KVS+TFDP +YL +P+P    + + +   + +  S P  F V+V K      +++D+LS    ++  E L +AE+ +++  RV   PS  L  +   D L+ + L  P+ ++   +VL +  R +
Sbjct:  673 WQRHKMRNDSFIVDLFQGQYKSKLVCPVCAKVSITFDPFLYLPVPLPQ-KQKVLPIFYFAREPHSKPIKFLVSVSKENSSASEVLDSLSQSVHVK-PENLRLAEVIKNRFHRVF-LPSHSLDAVSPTDVLLCFELLSPELAKERVVVLEVQQRPQ 824          

HSP 2 Score: 67.3958 bits (163), Expect = 2.901e-33
Identity = 29/43 (67.44%), Postives = 38/43 (88.37%), Query Frame = 3
Query:   66 LANFAPQFSGYNQHDSQEFLAFLLDGLHEDLNRVKCKPYLESI 194
            +A+ A QF+GY QHD+QEF+AFLLDGLHEDLNR++ KPY E++
Sbjct:  616 VASKASQFTGYAQHDAQEFMAFLLDGLHEDLNRIQNKPYTETV 658          
BLAST of EY664926 vs. ExPASy Swiss-Prot
Match: UBP19_RAT (Ubiquitin carboxyl-terminal hydrolase 19 OS=Rattus norvegicus GN=Usp19 PE=1 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 8.346e-33
Identity = 56/155 (36.13%), Postives = 90/155 (58.06%), Query Frame = 1
Query:  238 WRNHRARNDSIIVDLCQGQYRSMLVCPVCNKVSVTFDPLMYLSLPIPSTTMRTMTVTVLSTDGSSMPAPFTVTVPK-YGRFQDLIDALSTKCFLRNHEKLLVAEIYRSKIFRVLDEPSDLLGLIRDEDKLVAYRL--PKDSETPSLVLFMHDRXE 693
            W+ H+ RNDS IVDL QGQY+S LVCPVC KVS+TFDP +YL +P+P    + + +   + +  S P  F V+V K      +++++LS    ++  E L +AE+ +++  RV   PS  L  +   D L+ + L  P+ ++   +VL +  R +
Sbjct:  670 WQRHKMRNDSFIVDLFQGQYKSKLVCPVCAKVSITFDPFLYLPVPLPQ-KQKVLPIYYFAREPHSKPIKFLVSVSKENSSASEVLESLSQSVHVK-PESLRLAEVIKNRFHRVF-LPSHSLDAVSPTDVLLCFELLSPELAKERVVVLEVQQRPQ 821          

HSP 2 Score: 67.3958 bits (163), Expect = 8.346e-33
Identity = 29/43 (67.44%), Postives = 38/43 (88.37%), Query Frame = 3
Query:   66 LANFAPQFSGYNQHDSQEFLAFLLDGLHEDLNRVKCKPYLESI 194
            +A+ A QF+GY QHD+QEF+AFLLDGLHEDLNR++ KPY E++
Sbjct:  613 VASKASQFTGYAQHDAQEFMAFLLDGLHEDLNRIQNKPYTETV 655          
BLAST of EY664926 vs. ExPASy Swiss-Prot
Match: UBP32_HUMAN (Ubiquitin carboxyl-terminal hydrolase 32 OS=Homo sapiens GN=USP32 PE=1 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.760e-29
Identity = 43/109 (39.45%), Postives = 64/109 (58.72%), Query Frame = 1
Query:  238 WRNHRARNDSIIVDLCQGQYRSMLVCPVCNKVSVTFDPLMYLSLPIPSTTMRTMTVTVLSTDGSSMPAPFTVTVPKYGRFQDLIDALSTKCFLRNHEKLLVAEIYRSKI 564
            W NH  RN SI+VDL  GQ RS + C  C  +SV FDP  +LSLP+P  +   + +TV+  DG++ P  + + +    ++  L   LS  C L N E++L+AE++ S I
Sbjct:  868 WDNHLRRNRSIVVDLFHGQLRSQVKCKTCGHISVRFDPFNFLSLPLPMDSYMHLEITVIKLDGTT-PVRYGLRLNMDEKYTGLKKQLSDLCGL-NSEQILLAEVHGSNI 974          

HSP 2 Score: 70.4774 bits (171), Expect = 1.760e-29
Identity = 32/50 (64.00%), Postives = 40/50 (80.00%), Query Frame = 3
Query:   39 VAPICSNYPLANFAPQFSGYNQHDSQEFLAFLLDGLHEDLNRVKCKPYLE 188
            VAP+   + +A +AP+F+G+ Q DSQE LAFLLDGLHEDLNRV  KPY+E
Sbjct:  802 VAPLKLRWTIAKYAPRFNGFQQQDSQELLAFLLDGLHEDLNRVHEKPYVE 851          
BLAST of EY664926 vs. ExPASy Swiss-Prot
Match: UBP6_HUMAN (Ubiquitin carboxyl-terminal hydrolase 6 OS=Homo sapiens GN=USP6 PE=1 SV=2)

HSP 1 Score: 79.337 bits (194), Expect = 1.455e-28
Identity = 43/109 (39.45%), Postives = 63/109 (57.80%), Query Frame = 1
Query:  238 WRNHRARNDSIIVDLCQGQYRSMLVCPVCNKVSVTFDPLMYLSLPIPSTTMRTMTVTVLSTDGSSMPAPFTVTVPKYGRFQDLIDALSTKCFLRNHEKLLVAEIYRSKI 564
            W NH  RN SIIVDL  GQ RS + C  C  +SV FDP  +LSLP+P  +   + +TV+  DG++ P  + + +    ++  L   L   C L N E++L+AE++ S I
Sbjct:  666 WDNHLRRNRSIIVDLFHGQLRSQVKCKTCGHISVRFDPFNFLSLPLPMDSYMDLEITVIKLDGTT-PVRYGLRLNMDEKYTGLKKQLRDLCGL-NSEQILLAEVHDSNI 772          

HSP 2 Score: 68.5514 bits (166), Expect = 1.455e-28
Identity = 32/50 (64.00%), Postives = 38/50 (76.00%), Query Frame = 3
Query:   39 VAPICSNYPLANFAPQFSGYNQHDSQEFLAFLLDGLHEDLNRVKCKPYLE 188
            VAP+     +A +AP+F G+ Q DSQE LAFLLDGLHEDLNRV  KPY+E
Sbjct:  600 VAPLKLRRTIAKYAPKFDGFQQQDSQELLAFLLDGLHEDLNRVHEKPYVE 649          
BLAST of EY664926 vs. ExPASy Swiss-Prot
Match: UBP1_SCHPO (Probable ubiquitin carboxyl-terminal hydrolase 1 OS=Schizosaccharomyces pombe GN=ubp1 PE=2 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 6.302e-26
Identity = 45/140 (32.14%), Postives = 67/140 (47.86%), Query Frame = 1
Query:  238 WRNHRARNDSIIVDLCQGQYRSMLVCPVCNKVSVTFDPLMYLSLPIPSTTMRTMTVTVLSTDGSSMPAPF--------TVTVPKYGRFQDLIDALSTKCFLRNHEKLLVAEIYRSKIFRVLDEPSDLLGLIRDEDKLVAY 633
            W  H  RNDSIIV L QG Y+S L C +C + S  FDP MYL+LP+P++      V  +   G+  P           TV   K+ +  + +  +  +C      +L   +IYR K+++VL     +   I   D +V Y
Sbjct:  417 WDIHTKRNDSIIVQLFQGMYKSTLECSICYQKSTAFDPFMYLTLPLPTSAKWRHKVVYVPPFGTQSPVELYLELLMESTVIQMKF-QATEKLQKMGLEC-----GELTACDIYRGKVYKVLKNKDKISKKIHKWDHVVLY 550          

HSP 2 Score: 65.4698 bits (158), Expect = 6.302e-26
Identity = 29/50 (58.00%), Postives = 35/50 (70.00%), Query Frame = 3
Query:   39 VAPICSNYPLANFAPQFSGYNQHDSQEFLAFLLDGLHEDLNRVKCKPYLE 188
            V+P    + +  F   FSGY Q DSQEF+AF LDGLHEDLNR++ KPY E
Sbjct:  348 VSPSSFKFIIGEFNTYFSGYRQQDSQEFIAFFLDGLHEDLNRIQIKPYFE 397          
The following BLAST results are available for this feature:
BLAST of EY664926 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 36
Match NameE-valueIdentityDescription
UBP12_SCHPO1.923e-3539.13Probable ubiquitin carboxyl-terminal hydrolase 12 ... [more]
UBP15_MOUSE5.534e-3540.16Ubiquitin carboxyl-terminal hydrolase 15 OS=Mus mu... [more]
UBP11_MOUSE7.213e-3538.81Ubiquitin carboxyl-terminal hydrolase 11 OS=Mus mu... [more]
UBP11_HUMAN2.075e-3438.97Ubiquitin carboxyl-terminal hydrolase 11 OS=Homo s... [more]
UBP19_HUMAN1.711e-3340.00Ubiquitin carboxyl-terminal hydrolase 19 OS=Homo s... [more]
UBP19_MOUSE2.901e-3336.77Ubiquitin carboxyl-terminal hydrolase 19 OS=Mus mu... [more]
UBP19_RAT8.346e-3336.13Ubiquitin carboxyl-terminal hydrolase 19 OS=Rattus... [more]
UBP32_HUMAN1.760e-2939.45Ubiquitin carboxyl-terminal hydrolase 32 OS=Homo s... [more]
UBP6_HUMAN1.455e-2839.45Ubiquitin carboxyl-terminal hydrolase 6 OS=Homo sa... [more]
UBP1_SCHPO6.302e-2632.14Probable ubiquitin carboxyl-terminal hydrolase 1 O... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-072-A05-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY664926 ID=EY664926; Name=EY664926; organism=Citrus sinensis; type=EST; length=865bp
CGNATTCCAAAGCCGACCCACGCGTCCGGAGGAATCTAGTGGCTCCAATA
TGTTCAAATTACCCACTAGCTAACTTTGCTCCTCAGTTCAGTGGCTATAA
TCAACATGATTCCCAAGAATTTCTGGCCTTTTTATTGGATGGACTCCATG
AAGATCTAAATCGAGTGAAATGCAAGCCATACTTAGAATCTATATGATGC
AGAGGGACAACCAGAAGAAGAAGTAGCTGAAGAATATTGGAGGAATCACC
GGGCCCGCAATGATTCCATCATAGTTGACTTGTGCCAAGGCCAGTACCGT
TCAATGTTGGTTTGCCCAGTTTGCAATAAGGTGTCTGTCACATTCGATCC
ACTTATGTACCTGTCACTACCTATTCCTTCAACAACAATGAGGACTATGA
CTGTGACAGTTTTAAGCACTGATGGGAGTTCGATGCCAGCTCCGTTTACT
GTAACTGTACCAAAATACGGGAGGTTTCAGGATCTTATTGATGCTTTGAG
CACTAAATGTTTTTTAAGAAATCATGAAAAGCTGTTGGTGGCTGAGATAT
ACAGGAGTAAGATTTTTCGAGTGCTGGATGAGCCATCTGATTTGTTGGGA
TTGATCAGAGATGAAGACAAACTTGTTGCTTATCGTTTACCAAAAGATAG
TGAGACACCCTCCTTGGTTTTGTTCATGCATGATAGGAANGAAGAGTCTT
GCCATCTTGGGAGGTATCATTGGAATGAAAATATTTGCACCCCCTCTGGG
GGATGCTATCTGATCTTACTAATGGATCTGATATTCGTAAACTGTTTTGA
AATTACTCGATCCATTTCTAATGCCTGTGGAAGATGACTCAAATTTCTCT
GATGGAGCCCGGGAA
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