CX672674

Overview
NameCX672674
Unique NameCX672674
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length848
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX672674 vs. ExPASy Swiss-Prot
Match: FENR2_PEA (Ferredoxin--NADP reductase, root isozyme, chloroplastic OS=Pisum sativum PE=2 SV=2)

HSP 1 Score: 217.624 bits (553), Expect = 6.903e-56
Identity = 118/231 (51.08%), Postives = 148/231 (64.07%), Query Frame = 1
Query:  175 TEAPAKVEKESKKMEEGVIVNKFKPKTPYIGRCLLNTKITGDDAPGETWHMVFSTEGEVPYKEGQSIGVIADGVD--KNGKPHKLRLYSIASSALGDFGDSKTVSLCVKRLVY----TNENGEIVKGVCSNFLCDLKPGAEVKITGPVGKEMLMPRD-PNATVIMLATGTGIAPFRGFLWKMFFEKYEDYKFNGLAWLFLGVPTSSSLLYKEEFEKMKEKAPENFRLDFAV 846
            T +P ++E  S+       +N  KPK PY    +   ++ G  APGET H+V + +G VPY EGQS GVI  G +  K G PH +RLYSIAS+  GD  D KT SLCV+R VY    T +      GVCSNFLCD KPG ++KI GP GK ML+P D PNAT IM+ATGTG+AP+RG+L +MF E    +KF GLAWLFLGV    SLLY +EF K  +  P+NFR + A+
Sbjct:   72 TVSPLELENPSEPP-----LNLHKPKEPYTATIVSVERLVGPKAPGETCHIVINHDGNVPYWEGQSYGVIPPGENPKKPGSPHNVRLYSIASTRYGDNFDGKTASLCVRRAVYYDPVTGKEDPSKNGVCSNFLCDSKPGDKIKIAGPSGKIMLLPEDDPNATHIMIATGTGVAPYRGYLRRMFMESVPTFKFGGLAWLFLGVANVDSLLYDDEFTKYLKDYPDNFRYNRAL 297          
BLAST of CX672674 vs. ExPASy Swiss-Prot
Match: FENR2_TOBAC (Ferredoxin--NADP reductase, root-type isozyme, chloroplastic OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 217.238 bits (552), Expect = 9.015e-56
Identity = 127/263 (48.29%), Postives = 156/263 (59.32%), Query Frame = 1
Query:   79 ISPDRITLKKVPFYYKDVSTGGRVVSVRAQVTTEAPAKVEKESKKMEEGVIVNKFKPKTPYIGRCLLNTKITGDDAPGETWHMVFSTEGEVPYKEGQSIGVIADGVD--KNGKPHKLRLYSIASSALGDFGDSKTVSLCVKRLVY----TNENGEIVKGVCSNFLCDLKPGAEVKITGPVGKEMLMPRD-PNATVIMLATGTGIAPFRGFLWKMFFEKYEDYKFNGLAWLFLGVPTSSSLLYKEEFEKMKEKAPENFRLDFAV 846
            IS   I LK  P      S    +V +  Q  ++A   V   S +  +   +N +KPK PY    +   ++ G  APGET H+V   +G +PY EGQS GVI  G +  K G PH +RLY IAS+  GD  D KT SLCV+R VY    T +      GVCSNFLCD KPG +VKITGP GK ML+P + PNAT IM+ TGTG+APFRG+L +MF E     KFNGLAWLFLGV  + SLLY +EF K     P NFR D A+
Sbjct:   40 ISMPPIDLKAAP------SRNQHIVCMSVQQASKAKVSVSPLSLEDAKEPPLNIYKPKEPYTATIVSVERLVGPKAPGETCHIVIDHDGNLPYWEGQSYGVIPPGENPKKPGNPHNVRLYLIASTRYGDSFDGKTASLCVRRAVYYDPETGKEDPSKNGVCSNFLCDSKPGDKVKITGPSGKIMLLPEEIPNATHIMIGTGTGVAPFRGYLRRMFMESVPT-KFNGLAWLFLGVANTDSLLYDDEFTKYLNDYPGNFRYDRAL 295          
BLAST of CX672674 vs. ExPASy Swiss-Prot
Match: FENR_CHLRE (Ferredoxin--NADP reductase, chloroplastic OS=Chlamydomonas reinhardtii GN=PETH PE=1 SV=1)

HSP 1 Score: 206.068 bits (523), Expect = 2.078e-52
Identity = 110/241 (45.64%), Postives = 143/241 (59.34%), Query Frame = 1
Query:  148 VVSVRAQVTTEAPAKVEKESKKMEEGVI-VNKFKPKTPYIGRCLLNTKITGDDAPGETWHMVFSTEGEVPYKEGQSIGVIADGVDKNGKPHKL---RLYSIASSALGDFGDSKTVSLCVKRLVY----TNENGEIVKGVCSNFLCDLKPGAEVKITGPVGKEMLMPRDPNATVIMLATGTGIAPFRGFLWKMFFEKYEDYKFNGLAWLFLGVPTSSSLLYKEEFEKMKEKAPENFRLDFAV 846
            V + +A               K+EEG + +N +  K P+  +     KITG  A GET H++  TEG++P+ EGQS GVI  G   N K  ++   RLYSIASS  GD GD +T SLCV+R VY    T +     KG+CSNFLCD  PG E+ +TGP GK +L+P D NA +I +ATGTGIAPFR F  + F E    YKF GL WLF+GV  S + LY EE + + +  P  FRLD+A+
Sbjct:   34 VAATKASTAVTTDMSKRTVPTKLEEGEMPLNTYSNKAPFKAKVRSVEKITGPKATGETCHIIIETEGKIPFWEGQSYGVIPPGTKINSKGKEVPTARLYSIASSRYGDDGDGQTASLCVRRAVYVDPETGKEDPAKKGLCSNFLCDATPGTEISMTGPTGKVLLLPADANAPLICVATGTGIAPFRSFWRRCFIENVPSYKFTGLFWLFMGVGNSDAKLYDEELQAIAKAYPGQFRLDYAL 274          
BLAST of CX672674 vs. ExPASy Swiss-Prot
Match: BOXA_AZOEV (Benzoyl-CoA oxygenase component A OS=Azoarcus evansii GN=boxA PE=1 SV=1)

HSP 1 Score: 130.954 bits (328), Expect = 8.497e-30
Identity = 80/202 (39.60%), Postives = 110/202 (54.46%), Query Frame = 1
Query:  232 VNKFKPKTPYIGRCLLNTKITGDDAPGETWHMVFSTEGEVPYK--EGQSIGVIADGVDKNGKPHKLRLYSIASSALGDFGDSKTVSLCVKRLVYTNENGEIVKGVCSNFLCDLKPGAEVKITGPVGKEMLMPRDPNATVIMLATGTGIAPFRGFLWKMFFEKYEDYKFNGLAWLFLGVPTSSSLLYKEEFEKM-KEKAPENF 828
            VN + P  P       N ++T +DA  +  H+V    G  P+   EGQSIG+I  GVD+ GKPH LR+YS+AS   G+      +SL VKR+V  +E G   +GV SN++CDLK G +V++TGP G   LMP  P ++++M+ TGTG AP R    +    +  D K  G   LF G      L Y    +K+ KE    NF
Sbjct:  137 VNLYTPANPITATVTGNYRLTAEDASSDIHHIVLDF-GTTPFPVLEGQSIGIIPPGVDEKGKPHLLRMYSVASPRDGERPHYNNLSLTVKRVVEDHE-GNPTRGVASNYVCDLKKGDKVQVTGPYGSTYLMPNHPGSSIMMICTGTGSAPMRAMTERR--RRRMDRKEGGELVLFFGARAPEELPYFGPLQKLPKEFIDINF 334          
BLAST of CX672674 vs. ExPASy Swiss-Prot
Match: CYSJ_SHESR (Sulfite reductase [NADPH] flavoprotein alpha-component OS=Shewanella sp. (strain MR-7) GN=cysJ PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 3.965e-11
Identity = 47/132 (35.61%), Postives = 64/132 (48.48%), Query Frame = 1
Query:  409 KPHKLRLYSIASSALGDFGDSKTVSLCVKRLVYTNENGEIVKGVCSNFLCDLKPGAEVKITGPVGKEMLMPRDPNATVIMLATGTGIAPFRGFLWKMFFEKYEDYKFNGLAWLFLGVP-TSSSLLYKEEFEK 801
            +P   RLYSIASS      +  T       LV     G+   G  S+FL   + GAEVK+     K   +P DP   VIM+  GTG+APFR F+ +   +  E     G +WLF G P      LY+ E+++
Sbjct:  387 RPLTPRLYSIASSQ----SEVDTEVHLTVALVEDEHQGQARFGGASHFLASAEEGAEVKVYVEPNKHFRLPEDPQTPVIMIGPGTGVAPFRAFMQERVAQGAE-----GDSWLFFGNPHFEQDFLYQTEWQQ 509          
BLAST of CX672674 vs. ExPASy Swiss-Prot
Match: CYSJ_SHESM (Sulfite reductase [NADPH] flavoprotein alpha-component OS=Shewanella sp. (strain MR-4) GN=cysJ PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 3.965e-11
Identity = 47/132 (35.61%), Postives = 64/132 (48.48%), Query Frame = 1
Query:  409 KPHKLRLYSIASSALGDFGDSKTVSLCVKRLVYTNENGEIVKGVCSNFLCDLKPGAEVKITGPVGKEMLMPRDPNATVIMLATGTGIAPFRGFLWKMFFEKYEDYKFNGLAWLFLGVP-TSSSLLYKEEFEK 801
            +P   RLYSIASS      +  T       LV     G+   G  S+FL   + GAEVK+     K   +P DP   VIM+  GTG+APFR F+ +   +  E     G +WLF G P      LY+ E+++
Sbjct:  387 RPLTPRLYSIASSQ----SEVDTEVHLTVALVEDEHQGQARFGGASHFLASAEEGAEVKVYVEPNKHFRLPEDPQTPVIMIGPGTGVAPFRAFMQERVAQGAE-----GDSWLFFGNPHFEQDFLYQTEWQQ 509          
BLAST of CX672674 vs. ExPASy Swiss-Prot
Match: CYSJ_SHESA (Sulfite reductase [NADPH] flavoprotein alpha-component OS=Shewanella sp. (strain ANA-3) GN=cysJ PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 3.965e-11
Identity = 47/132 (35.61%), Postives = 64/132 (48.48%), Query Frame = 1
Query:  409 KPHKLRLYSIASSALGDFGDSKTVSLCVKRLVYTNENGEIVKGVCSNFLCDLKPGAEVKITGPVGKEMLMPRDPNATVIMLATGTGIAPFRGFLWKMFFEKYEDYKFNGLAWLFLGVP-TSSSLLYKEEFEK 801
            +P   RLYSIASS      +  T       LV     G+   G  S+FL   + GAEVK+     K   +P DP   VIM+  GTG+APFR F+ +   +  E     G +WLF G P      LY+ E+++
Sbjct:  387 RPLTPRLYSIASSQ----SEVDTEVHLTVALVEDEHQGQARFGGASHFLASAEEGAEVKVYVEPNKHFRLPEDPQTPVIMIGPGTGVAPFRAFMQERVAQGAE-----GDSWLFFGNPHFEQDFLYQTEWQQ 509          
The following BLAST results are available for this feature:
BLAST of CX672674 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 27
Match NameE-valueIdentityDescription
FENR2_PEA6.903e-5651.08Ferredoxin--NADP reductase, root isozyme, chloropl... [more]
FENR2_TOBAC9.015e-5648.29Ferredoxin--NADP reductase, root-type isozyme, chl... [more]
FENR_CHLRE2.078e-5245.64Ferredoxin--NADP reductase, chloroplastic OS=Chlam... [more]
BOXA_AZOEV8.497e-3039.60Benzoyl-CoA oxygenase component A OS=Azoarcus evan... [more]
CYSJ_SHESR3.965e-1135.61Sulfite reductase [NADPH] flavoprotein alpha-compo... [more]
CYSJ_SHESM3.965e-1135.61Sulfite reductase [NADPH] flavoprotein alpha-compo... [more]
CYSJ_SHESA3.965e-1135.61Sulfite reductase [NADPH] flavoprotein alpha-compo... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_18E05_g Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-18E05-I10-6.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX672674 ID=CX672674; Name=CX672674; organism=Citrus sinensis; type=EST; length=848bp
TCAATCATGGCTGCAGTGAGTGCTGCAGTTTCTCTTCCGACTTCCAAGTC
CACTTCGCTTCCAACCAGAACCTCTATCATCTCTCCTGACAGAATCACCT
TAAAAAAGGTTCCATTTTACTACAAAGATGTTTCAACTGGAGGGAGAGTG
GTTTCTGTCAGAGCTCAGGTTACCACTGAGGCTCCTGCTAAGGTCGAGAA
AGAGTCCAAGAAAATGGAGGAAGGTGTTATTGTTAACAAGTTCAAACCTA
AGACACCTTACATTGGCAGATGCCTTTTAAACACTAAGATCACTGGTGAT
GATGCTCCTGGAGAGACCTGGCACATGGTCTTCAGCACTGAAGGAGAGGT
TCCCTACAAAGAAGGGCAATCAATTGGGGTGATTGCAGATGGTGTTGACA
AGAATGGGAAGCCTCACAAACTGAGATTATACTCCATTGCTAGCAGTGCC
CTTGGTGACTTTGGAGACTCCAAAACTGTTTCTTTATGTGTGAAAAGGCT
TGTGTACACCAACGAAAATGGAGAAATTGTTAAGGGAGTCTGCTCAAATT
TCTTGTGTGACTTGAAGCCTGGGGCTGAAGTGAAAATTACAGGACCTGTT
GGGAAAGAAATGCTCATGCCAAGGGATCCCAATGCTACAGTCATCATGCT
TGCGACTGGAACTGGAATCGCTCCATTCCGTGGATTTTTGTGGAAAATGT
TCTTTGAGAAGTACGAAGACTACAAGTTCAATGGTTTGGCATGGCTCTTC
TTGGGTGTCCCGACTAGCAGTTCCCTACTCTACAAGGAGGAGTTTGAGAA
GATGAAGGAGAAGGCCCCGGAAAACTTCAGGCTTGACTTTGCAGTGAG
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