EY664891
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY664891 vs. ExPASy Swiss-Prot
Match: CB121_HORVU (Chlorophyll a-b binding protein 1B-21, chloroplastic OS=Hordeum vulgare GN=LHC Ib-21 PE=1 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 1.000e-22 Identity = 75/197 (38.07%), Postives = 102/197 (51.78%), Query Frame = 2 Query: 224 WFPGSTPPSWLDGSLPGDYGFDPLGLGSDPELLKWFAQAELIHGRWAMLAVAGILIPEWLESIGLIENFSW--YDAGSREYFADPT------TLFVVQLALMGWVEGRRWADIINPGCVDIQPDLPYKTKPKPDVGYPGGIWFDPMMWGKRSPXPVMVLRTKGX*DGRLAMLAFRGFCFQPFIRAGS-PLK-LALHV 784 WFPG P+ LDGS PGD+GFDPLGL + PE + F ++E+ H RWAML V G+L+PE L ++ W G Y +P T+ ++ + + E +R ++ D P K K YPGG FDP+ + K P L+ K +GRLAMLAF GFC Q G+ PL+ LA H+ Sbjct: 48 WFPGQPRPAHLDGSSPGDFGFDPLGLATVPENFERFKESEIYHCRWAMLCVPGVLVPEALGLGNWVKAQEWAALPDGQATYLGNPVPWGNLPTILAIEFLAIAFAEQQR----------TMEKD-PEKKK------YPGGA-FDPLGFSK-DPAKFEELKLKEIKNGRLAMLAFVGFCVQQSAYPGTGPLENLATHL 225
BLAST of EY664891 vs. ExPASy Swiss-Prot
Match: CB11_SOLLC (Chlorophyll a-b binding protein 6A, chloroplastic OS=Solanum lycopersicum GN=CAB6A PE=2 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 1.306e-22 Identity = 71/197 (36.04%), Postives = 96/197 (48.73%), Query Frame = 2 Query: 224 WFPGSTPPSWLDGSLPGDYGFDPLGLGSDPELLKWFAQAELIHGRWAMLAVAGILIPEWLESIGLIENFSW--YDAGSREYFADPT------TLFVVQLALMGWVEGRRWADIINPGCVDIQPDLPYKTKPKPDVGYPGGIWFDPMMWGKRSPXPVMVLRTKGX*DGRLAMLAFRGFCFQ--PFIRAGSPLKLALHV 784 W PG PS+LDGS PGD+GFD LGLG P L+ + ++ELIH RWAMLAV GI++PE L ++ W G Y P T+ ++ + +VE +R + K YPGG FDP+ + K P L+ K +GRLA+LA GFC Q ++ G LA H+ Sbjct: 49 WMPGQPRPSYLDGSAPGDFGFDSLGLGEVPANLERYKESELIHCRWAMLAVPGIIVPEALGLGNWVKAQEWAAIPGGQATYLGQPVPWGTLPTILAIEFLAIAFVEHQRSME-----------------KDSEKKKYPGGA-FDPLGYSK-DPAKFEELKVKEIKNGRLALLAIVGFCVQQSAYLGTGPLENLATHL 226
BLAST of EY664891 vs. ExPASy Swiss-Prot
Match: CB4B_ARATH (Chlorophyll a-b binding protein CP29.2, chloroplastic OS=Arabidopsis thaliana GN=LHCB4.2 PE=1 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 5.487e-21 Identity = 76/239 (31.80%), Postives = 100/239 (41.84%), Query Frame = 2 Query: 212 DRPLWFPGSTPPSWLDGSLPGDYGFDPLGLGSDPELLKW-------------------------------------------FAQAELIHGRWAMLAVAGILIPEWLESIGLIENFSWYDAGSRE------YFADP-----TTLFVVQLALMGWVEGRRWADIINPGCVDIQPDLPYKTKPKPDVGYPGGIWFDPMMWGKRSPXPVMVLRTKGX*DGRLAMLAFRGFCFQPFIRAGSPL 766 DRPLWFPG+ P +LDGSL GDYGFDP GLG E L++ F + ELIHGRWAMLA G + EWL + +W DAG E Y P +TL +++ ++G++E +R A++ D + L YPGG +FDP+ P L+ RLAM+ F GF Q PL Sbjct: 51 DRPLWFPGAKSPEYLDGSLVGDYGFDPFGLGKPAEYLQFDLDSLDQNLAKNLYGEVIGTRTEAVDPKSTPFQPYSEVFGLQRFRECELIHGRWAMLATLGAITVEWLTGV------TWQDAGKVELVDGSSYLGQPLPFSISTLIWIEVLVIGYIEFQRNAEL------DSEKRL-----------YPGGKFFDPLGLAS-DPVKKAQLQLAEIKHARLAMVGFLGFAVQAAATGKGPL 265
BLAST of EY664891 vs. ExPASy Swiss-Prot
Match: CB23_SOYBN (Chlorophyll a-b binding protein 3, chloroplastic OS=Glycine max GN=CAB3 PE=3 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 2.305e-19 Identity = 83/234 (35.47%), Postives = 107/234 (45.73%), Query Frame = 2 Query: 143 VGRGGVIVNATKGVSSVCEPLPPDRPLW---FPGSTPPSWLDGSLPGDYGFDPLGLGSDPELLKWFAQAELIHGRWAMLAVAGILIPEWLESIGL-IENFSWYDAGSR-------EYFADPT--------TLFVVQLALMGWVEGRRWADIINPGCVDIQPDLPYKTKPKPDVGYPGGIWFDPMMWGKRSPXPVMVLRTKGX*DGRLAMLAFRGFCFQPFIRAGSPLK-LALHV 784 VGR + TK VSS PDR + F G PPS+L G PGDYG+D GL +DPE + E+IH RWAML G + PE L G+ W+ AGS+ +Y +P+ ++ Q+ LMG VEG R A L T P YPGG FDP+ P L+ K +GRLAM + GF Q + PL+ LA H+ Sbjct: 28 VGRVSMRKTVTKQVSSGSPWYGPDRVKYLGPFSGE-PPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWATQVILMGAVEGYRIAG----------GPLGEVTDPI----YPGGS-FDPLGLAD-DPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHL 244
BLAST of EY664891 vs. ExPASy Swiss-Prot
Match: CB21_SOYBN (Chlorophyll a-b binding protein, chloroplastic (Fragment) OS=Glycine max PE=2 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 3.011e-19 Identity = 83/234 (35.47%), Postives = 108/234 (46.15%), Query Frame = 2 Query: 143 VGRGGVIVNATKGVSSVCEPLPPDRPLW---FPGSTPPSWLDGSLPGDYGFDPLGLGSDPELLKWFAQAELIHGRWAMLAVAGILIPEWLESIGL-IENFSWYDAGSR-------EYFADPT--------TLFVVQLALMGWVEGRRWADIINPGCVDIQPDLPYKTKPKPDVGYPGGIWFDPMMWGKRSPXPVMVLRTKGX*DGRLAMLAFRGFCFQPFIRAGSPLK-LALHV 784 VGR + A+K VSS PDR + F G PPS+L G PGDYG+D GL +DPE + E+IH RWAML G + PE L G+ SW+ AGS+ +Y + + ++ Q+ LMG VEG R A L T P YPGG FDP+ P L+ K +GRLAM + GF Q + PL+ LA H+ Sbjct: 10 VGRVSMRKTASKTVSSGSPWYGPDRVKYLGPFSGE-PPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEASWFKAGSQIFSEGGLDYLGNQSLIHAQSILAIWATQVILMGAVEGYRIAG----------GPLGEVTDPI----YPGGS-FDPLALAD-DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHL 226
BLAST of EY664891 vs. ExPASy Swiss-Prot
Match: CB21_WHEAT (Chlorophyll a-b binding protein, chloroplastic OS=Triticum aestivum GN=WHAB1.6 PE=3 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 1.144e-18 Identity = 81/246 (32.93%), Postives = 111/246 (45.12%), Query Frame = 2 Query: 131 TKCLVGRGGVIVNAT----KGVSSVCEPLPPDRPLWFP--GSTPPSWLDGSLPGDYGFDPLGLGSDPELLKWFAQAELIHGRWAMLAVAGILIPEWLESIGL-IENFSWYDAGSR-------EYFADPT--------TLFVVQLALMGWVEGRRWA-----DIINPGCVDIQPDLPYKTKPKPDVGYPGGIWFDPMMWGKRSPXPVMVLRTKGX*DGRLAMLAFRGFCFQPFIRAGSPLK-LALHV 784 + L+G V + T K VSS DR L+ PPS+L G PGDYG+D GL +DPE + E+IH RWAML G + PE L G+ W+ AGS+ +Y +P+ ++ Q+ LMG VEG R A +I++P YPGG FDP+ +R P L+ K +GRLAM + GF Q + PL+ LA H+ Sbjct: 23 SSALIGDARVNMRKTAAKAKQVSSSSPWYGSDRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAGWFKAGSQIFSDGGLDYLGNPSLVHAQSLLAIWACQVVLMGAVEGYRIAGGPLGEIVDP-------------------LYPGGS-FDPLGLAER-PQAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLEDLADHI 247
BLAST of EY664891 vs. ExPASy Swiss-Prot
Match: CB21_CUCSA (Chlorophyll a-b binding protein of LHCII type I, chloroplastic (Fragment) OS=Cucumis sativus PE=2 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 1.144e-18 Identity = 80/225 (35.56%), Postives = 104/225 (46.22%), Query Frame = 2 Query: 170 ATKGVSSVCEPLPPDRPLW---FPGSTPPSWLDGSLPGDYGFDPLGLGSDPELLKWFAQAELIHGRWAMLAVAGILIPEWLESIGL-IENFSWYDAGSR-------EYFADPT--------TLFVVQLALMGWVEGRRWADIINPGCVDIQPDLPYKTKPKPDVGYPGGIWFDPMMWGKRSPXPVMVLRTKGX*DGRLAMLAFRGFCFQPFIRAGSPLK-LALHV 784 A+K VSS PDR + F G PPS+L G PGDYG+D GL +DPE + E+IH RWAML G + PE L G+ W+ AGS+ +Y +P+ ++ Q+ LMG VEG R A L T P YPGG FDP+ P L+ K +GRLAM + GF Q + PL+ LA H+ Sbjct: 29 ASKSVSSGSPWYGPDRVKYLGPFSGE-PPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAG----------GPLGEVTDPI----YPGGS-FDPLGLAD-DPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHL 236
BLAST of EY664891 vs. ExPASy Swiss-Prot
Match: CB2_CHLMO (Chlorophyll a-b binding protein of LHCII type I, chloroplastic OS=Chlamydomonas moewusii PE=2 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 1.494e-18 Identity = 79/248 (31.85%), Postives = 109/248 (43.95%), Query Frame = 2 Query: 101 IPQKRFTEKITKCLVGRGGVIVNATKGVSSVCEPLPPDRPLWF-PGST-PPSWLDGSLPGDYGFDPLGLGSDPELLKWFAQAELIHGRWAMLAVAGILIPEWLESIGLIE--NFSWYDAGSR-------EYFADPTTL--------FVVQLALMGWVEGRRWADIINPGCVDIQPDLPYKTKPKPDVGYPGGIWFDPMMWGKRSPXPVMVLRTKGX*DGRLAMLAFRGFCFQPFIRAGSPLK-LALHV 784 I + T K+ G A S+ E PDR W P ST P++L G PGDYG+D GL +DPE K + + E+IH RWA+L GIL PE L + ++ W+ AG++ +Y P + VQ+ LMG +EG R +N G D YPG FDP+ P L+ K +GRLAM + GF Q + P++ LA H+ Sbjct: 6 ISNRALTVKVEAAKKAAGTKQTKAAPAKSAGIEWYGPDRAKWLGPFSTNTPAYLTGEFPGDYGWDTAGLSADPETFKKYRELEVIHARWALLGALGILTPELLSTYAGVKFGEPVWFKAGAQIFSEGGLDYLGSPALIHAQNIVATLAVQVVLMGLIEGYR----VNGG----------PAGEGLDPLYPGES-FDPLGLAD-DPDTFAELKVKEIKNGRLAMFSCFGFFVQAIVTGKGPIQNLADHL 237
BLAST of EY664891 vs. ExPASy Swiss-Prot
Match: CB23_POLMU (Chlorophyll a-b binding protein type 1 member F3, chloroplastic OS=Polystichum munitum GN=CABF3 PE=3 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 2.549e-18 Identity = 74/206 (35.92%), Postives = 98/206 (47.57%), Query Frame = 2 Query: 212 DRPLW---FPGSTPPSWLDGSLPGDYGFDPLGLGSDPELLKWFAQAELIHGRWAMLAVAGILIPEWLESIGL-IENFSWYDAGSR-------EYFADPT--------TLFVVQLALMGWVEGRRWADIINP-GCVDIQPDLPYKTKPKPDVGYPGGIWFDPMMWGKRSPXPVMVLRTKGX*DGRLAMLAFRGFCFQPFIRAGSPLK 769 DRPL+ F GS PPS+L G PGDYG+D GL +DPE + E+IH RWAML G + PE L G+ W+ AGS+ +Y +P+ ++ Q+ LMG VEG R A P G V+ D YPGG FDP+ P L+ K +GRLAM + GF Q + P++ Sbjct: 53 DRPLYLGPFSGS-PPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTPELLAKNGVKFGEAVWFKAGSQIFAEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAG--GPLGEVE-------------DPIYPGGS-FDPLGLAD-DPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIE 240
BLAST of EY664891 vs. ExPASy Swiss-Prot
Match: CB21_ORYSJ (Chlorophyll a-b binding protein 1, chloroplastic OS=Oryza sativa subsp. japonica GN=CAB1R PE=2 SV=2) HSP 1 Score: 91.6633 bits (226), Expect = 5.678e-18 Identity = 69/203 (33.99%), Postives = 95/203 (46.80%), Query Frame = 2 Query: 242 PPSWLDGSLPGDYGFDPLGLGSDPELLKWFAQAELIHGRWAMLAVAGILIPEWLESIGL-IENFSWYDAGSR-------EYFADPT--------TLFVVQLALMGWVEGRRWA-----DIINPGCVDIQPDLPYKTKPKPDVGYPGGIWFDPMMWGKRSPXPVMVLRTKGX*DGRLAMLAFRGFCFQPFIRAGSPLK-LALHV 784 PPS+L G PGDYG+D GL +DPE + E+IH RWAML G + PE L G+ W+ AGS+ +Y +P+ ++ VQ+ LMG VEG R A ++++P YPGG FDP+ P L+ K +GRLAM + GF Q + PL+ LA H+ Sbjct: 65 PPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWAVQVVLMGAVEGYRIAGGPLGEVVDP-------------------LYPGGA-FDPLGLAD-DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHL 246 The following BLAST results are available for this feature:
BLAST of EY664891 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 73
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Sequences
The
following sequences are available for this feature:
EST sequence >EY664891 ID=EY664891; Name=EY664891; organism=Citrus sinensis; type=EST; length=844bpback to top |