EY664891

Overview
NameEY664891
Unique NameEY664891
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length844
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY664891 vs. ExPASy Swiss-Prot
Match: CB21_MAIZE (Chlorophyll a-b binding protein 1, chloroplastic OS=Zea mays GN=CAB1 PE=3 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 5.678e-18
Identity = 78/242 (32.23%), Postives = 107/242 (44.21%), Query Frame = 2
Query:  146 GRGGVIVNATKGVSSVCEP----LPPDRPLW---FPGSTPPSWLDGSLPGDYGFDPLGLGSDPELLKWFAQAELIHGRWAMLAVAGILIPEWLESIGL-IENFSWYDAGSR-------EYFADPT--------TLFVVQLALMGWVEGRRWA-----DIINPGCVDIQPDLPYKTKPKPDVGYPGGIWFDPMMWGKRSPXPVMVLRTKGX*DGRLAMLAFRGFCFQPFIRAGSPLK-LALHV 784
            G G + +  T G   V         PDR  +   F G  PPS+L G  PGDYG+D  GL +DPE      + E+IH RWAML   G + PE L   G+      W+ AGS+       +Y  +P+         ++  Q+ LMG VEG R A     ++++P                    YPGG  FDP+      P     L+ K   +GRLAM +  GF  Q  +    PL+ LA H+
Sbjct:   24 GEGRITMRKTVGKPKVAASGSPWYGPDRVKYLGPFSGE-PPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVVDP-------------------LYPGGS-FDPLGLAD-DPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHI 243          
BLAST of EY664891 vs. ExPASy Swiss-Prot
Match: CB23_SOLLC (Chlorophyll a-b binding protein 13, chloroplastic OS=Solanum lycopersicum GN=CAB13 PE=1 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 7.416e-18
Identity = 68/192 (35.42%), Postives = 90/192 (46.88%), Query Frame = 2
Query:  245 PSWLDGSLPGDYGFDPLGLGSDPELLKWFAQAELIHGRWAMLAVAGILIPEWLESIGLIE--NFSWYDAGSR-------EYFADPTTLFV--------VQLALMGWVEGRRWADIINPGCVDIQPDLPYKTKPKPDVGYPGGIWFDPMMWGKRSPXPVMVLRTKGX*DGRLAMLAFRGFCFQPFIRAGSPLK 769
            PS+L+G  PGDYG+D  GL +DPE        E+IHGRWAML   G + PE LE    ++     W+ AGS+       +Y  +P  +           Q+ LMG VEG R   +  PG V    DL           YPGG +FDP+      P     L+ K   +GRLAM +  GF  Q  +    PL+
Sbjct:   64 PSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRWAMLGALGCIFPEVLEKWVKVDFKEPVWFKAGSQIFSDGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGL--PG-VGEGNDL-----------YPGGQYFDPLGLAD-DPTTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLE 240          
BLAST of EY664891 vs. ExPASy Swiss-Prot
Match: CB22_ORYSJ (Chlorophyll a-b binding protein 2, chloroplastic OS=Oryza sativa subsp. japonica GN=CAB2R PE=2 SV=2)

HSP 1 Score: 91.2781 bits (225), Expect = 7.416e-18
Identity = 69/203 (33.99%), Postives = 95/203 (46.80%), Query Frame = 2
Query:  242 PPSWLDGSLPGDYGFDPLGLGSDPELLKWFAQAELIHGRWAMLAVAGILIPEWLESIGL-IENFSWYDAGSR-------EYFADPT--------TLFVVQLALMGWVEGRRWA-----DIINPGCVDIQPDLPYKTKPKPDVGYPGGIWFDPMMWGKRSPXPVMVLRTKGX*DGRLAMLAFRGFCFQPFIRAGSPLK-LALHV 784
            PPS+L G  PGDYG+D  GL +DPE      + E+IH RWAML   G + PE L   G+      W+ AGS+       +Y  +P+         ++ VQ+ LMG VEG R A     ++++P                    YPGG  FDP+      P     L+ K   +GRLAM +  GF  Q  +    PL+ LA H+
Sbjct:   61 PPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWAVQVVLMGAVEGYRIAGGPLGEVVDP-------------------LYPGGS-FDPLGLAD-DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHL 242          
BLAST of EY664891 vs. ExPASy Swiss-Prot
Match: CB22_MAIZE (Chlorophyll a-b binding protein, chloroplastic OS=Zea mays PE=2 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 7.416e-18
Identity = 73/216 (33.80%), Postives = 99/216 (45.83%), Query Frame = 2
Query:  209 PDRPLWFP--GSTPPSWLDGSLPGDYGFDPLGLGSDPELLKWFAQAELIHGRWAMLAVAGILIPEWLESIGL-IENFSWYDAGSR-------EYFADPT--------TLFVVQLALMGWVEGRRWA-----DIINPGCVDIQPDLPYKTKPKPDVGYPGGIWFDPMMWGKRSPXPVMVLRTKGX*DGRLAMLAFRGFCFQPFIRAGSPLK-LALHV 784
            PDR L+       PPS+L G  PGDYG+D  GL +DPE      + E+IH RWAML   G + PE L   G+      W+ AGS+       +Y  +P+         ++  Q+ LMG VEG R A     ++++P                    YPGG  FDP+      P     L+ K    GRLAML+  GF  Q  +    PL+ LA H+
Sbjct:   52 PDRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVVDP-------------------LYPGGS-FDPLGLAD-DPEAFGELKVKELKKGRLAMLSMFGFFVQAIVTGKGPLENLADHI 246          
BLAST of EY664891 vs. ExPASy Swiss-Prot
Match: CB23_ORYSJ (Chlorophyll a-b binding protein, chloroplastic OS=Oryza sativa subsp. japonica GN=RCABP89 PE=2 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 9.686e-18
Identity = 73/229 (31.88%), Postives = 102/229 (44.54%), Query Frame = 2
Query:  143 VGRGGVIVNATKGVSSVCEPL--PPDRPLWFP--GSTPPSWLDGSLPGDYGFDPLGLGSDPELLKWFAQAELIHGRWAMLAVAGILIPEWLESIGL-IENFSWYDAGSR-------EYFADPT--------TLFVVQLALMGWVEGRRWADIINPGCVDIQPDLPYKTKPKPDVGYPGGIWFDPMMWGKRSPXPVMVLRTKGX*DGRLAMLAFRGFCFQPFIRAGSPLK 769
            VG  G  +   + V S  + +   PDRP +        PS+L G  PGDYG+D  GL +DPE      + E+IH RWAML   G + PE L   G+      W+ AG++       +Y  +P          ++ VQ+ LMG+VEG R       G   +   L        D  YPGG  FDP+      P     L+ K   +GRLAM +  GF  Q  +    P++
Sbjct:   26 VGDSGGRITMRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAIWAVQVVLMGFVEGYR------VGGGPLGEGL--------DKVYPGGA-FDPLGLAD-DPDTFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIE 238          
BLAST of EY664891 vs. ExPASy Swiss-Prot
Match: CB23_ORYSI (Chlorophyll a-b binding protein, chloroplastic OS=Oryza sativa subsp. indica GN=OsI_012078 PE=2 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 9.686e-18
Identity = 73/229 (31.88%), Postives = 102/229 (44.54%), Query Frame = 2
Query:  143 VGRGGVIVNATKGVSSVCEPL--PPDRPLWFP--GSTPPSWLDGSLPGDYGFDPLGLGSDPELLKWFAQAELIHGRWAMLAVAGILIPEWLESIGL-IENFSWYDAGSR-------EYFADPT--------TLFVVQLALMGWVEGRRWADIINPGCVDIQPDLPYKTKPKPDVGYPGGIWFDPMMWGKRSPXPVMVLRTKGX*DGRLAMLAFRGFCFQPFIRAGSPLK 769
            VG  G  +   + V S  + +   PDRP +        PS+L G  PGDYG+D  GL +DPE      + E+IH RWAML   G + PE L   G+      W+ AG++       +Y  +P          ++ VQ+ LMG+VEG R       G   +   L        D  YPGG  FDP+      P     L+ K   +GRLAM +  GF  Q  +    P++
Sbjct:   26 VGDSGGRITMRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAIWAVQVVLMGFVEGYR------VGGGPLGEGL--------DKVYPGGA-FDPLGLAD-DPDTFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIE 238          
BLAST of EY664891 vs. ExPASy Swiss-Prot
Match: CB21_SINAL (Chlorophyll a-b binding protein 1, chloroplastic OS=Sinapis alba GN=CAB1 PE=3 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 1.265e-17
Identity = 77/250 (30.80%), Postives = 104/250 (41.60%), Query Frame = 2
Query:  116 FTEKITKCLVGRGGVIVNATKGVSSVCEPLPPDRPLWFPGST----------PPSWLDGSLPGDYGFDPLGLGSDPELLKWFAQAELIHGRWAMLAVAGILIPEWLESIGL-IENFSWYDAGSR-------EYFADPT--------TLFVVQLALMGWVEGRRWADIINPGCVDIQPDLPYKTKPKPDVGYPGGIWFDPMMWGKRSPXPVMVLRTKGX*DGRLAMLAFRGFCFQPFIRAGSPLK-LALHV 784
            F  K  K   G   V       +    +P  P    W+              PPS+L G  PGDYG+D  GL +DPE      + E+IH RWAML   G + PE L   G+      W+ AGS+       +Y  +P+         ++  Q+ LMG VEG R A     G  +             D+ YPGG  FDP+      P     L+ K   +GRLAM +  GF  Q  +    PL+ LA H+
Sbjct:   13 FAGKAVKLSPGASEVFGTGRVTMRKTVKPTGPSGSPWYGSDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRVAGEGPLGEAE-------------DLLYPGGS-FDPLGLA-TDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHL 247          
BLAST of EY664891 vs. ExPASy Swiss-Prot
Match: CB215_PEA (Chlorophyll a-b binding protein 215, chloroplastic OS=Pisum sativum GN=CAB215 PE=1 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 1.265e-17
Identity = 71/205 (34.63%), Postives = 94/205 (45.85%), Query Frame = 2
Query:  209 PDRPLWF-PGSTP-PSWLDGSLPGDYGFDPLGLGSDPELLKWFAQAELIHGRWAMLAVAGILIPEWLESIGL-IENFSWYDAGSR-------EYFADPT--------TLFVVQLALMGWVEGRRWADIINPGCVDIQPDLPYKTKPKPDVGYPGGIWFDPMMWGKRSPXPVMVLRTKGX*DGRLAMLAFRGFCFQPFIRAGSPLK 769
            PDRP +  P S   PS+L G  PGDYG+D  GL +DPE      + E+IH RWAML   G   PE LE  G+      W+ AGS+       +Y  +P          ++  Q+ LMG+VEG R       G   +   L        D  YPGG  FDP+      P     L+ K   +GRLAM +  GF  Q  +    P++
Sbjct:   52 PDRPKYLGPFSEQIPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCTFPELLEKNGVKFGEAVWFKAGSQIFAEGGLDYLGNPNLIHAQSILAIWATQVVLMGFVEGYR------VGGGPLGEGL--------DPLYPGGA-FDPLGLAD-DPDSFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIQ 240          
BLAST of EY664891 vs. ExPASy Swiss-Prot
Match: CB29_MAIZE (Chlorophyll a-b binding protein M9, chloroplastic OS=Zea mays GN=CAB-M9 PE=2 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.652e-17
Identity = 70/216 (32.41%), Postives = 99/216 (45.83%), Query Frame = 2
Query:  209 PDRPLWFP--GSTPPSWLDGSLPGDYGFDPLGLGSDPELLKWFAQAELIHGRWAMLAVAGILIPEWLESIGL-IENFSWYDAGSR-------EYFADPT--------TLFVVQLALMGWVEGRRWA-----DIINPGCVDIQPDLPYKTKPKPDVGYPGGIWFDPMMWGKRSPXPVMVLRTKGX*DGRLAMLAFRGFCFQPFIRAGSPLK-LALHV 784
            PDR L+       PPS+L G  PGDYG+D  GL +DPE      + E+IH RWAML   G + PE L   G+      W+ AGS+       +Y  +P+         ++  Q+ LMG +EG R A     ++++P                    YPGG  FDP+      P     ++ K   +GRLAM +  GF  Q  +    PL+ LA H+
Sbjct:   52 PDRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAIEGYRVAGGPLGEVVDP-------------------LYPGGT-FDPLGLAD-DPEAFADVKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHL 246          
BLAST of EY664891 vs. ExPASy Swiss-Prot
Match: CB25_NICPL (Chlorophyll a-b binding protein E, chloroplastic OS=Nicotiana plumbaginifolia GN=CABE PE=3 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.652e-17
Identity = 77/231 (33.33%), Postives = 106/231 (45.89%), Query Frame = 2
Query:  167 NATKGVSSVCEPLPPDRPLW---FPGSTPPSWLDGSLPGDYGFDPLGLGSDPELLKWFAQAELIHGRWAMLAVAGILIPEWLESIGL-IENFSWYDAGSR-------EYFADPT--------TLFVVQLALMGWVEGRRWA-----DIINPGCVDIQPDLPYKTKPKPDVGYPGGIWFDPMMWGKRSPXPVMVLRTKGX*DGRLAMLAFRGFCFQPFIRAGSPLK-LALHV 784
            N  K VSS      PDR  +   F G +P S+L G  PGDYG+D  GL +DPE      + E+IH RWAML   G + PE L   G+      W+ AGS+       +Y  +P+         ++  Q+ LMG VEG R A     ++++P                    YPGG  FDP+   +  P     L+ K   +GRLAM +  GF  Q  +    PL+ LA H+
Sbjct:   39 NKAKPVSSGSPWYGPDRVKYLGPFSGESP-SYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGEPLGEVVDP-------------------LYPGGS-FDPLGLAE-DPEAFAELKVKEIKNGRLAMFSMFGFFVQALVTGKGPLENLADHL 247          
The following BLAST results are available for this feature:
BLAST of EY664891 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 73
Match NameE-valueIdentityDescription
CB21_MAIZE5.678e-1832.23Chlorophyll a-b binding protein 1, chloroplastic O... [more]
CB23_SOLLC7.416e-1835.42Chlorophyll a-b binding protein 13, chloroplastic ... [more]
CB22_ORYSJ7.416e-1833.99Chlorophyll a-b binding protein 2, chloroplastic O... [more]
CB22_MAIZE7.416e-1833.80Chlorophyll a-b binding protein, chloroplastic OS=... [more]
CB23_ORYSJ9.686e-1831.88Chlorophyll a-b binding protein, chloroplastic OS=... [more]
CB23_ORYSI9.686e-1831.88Chlorophyll a-b binding protein, chloroplastic OS=... [more]
CB21_SINAL1.265e-1730.80Chlorophyll a-b binding protein 1, chloroplastic O... [more]
CB215_PEA1.265e-1734.63Chlorophyll a-b binding protein 215, chloroplastic... [more]
CB29_MAIZE1.652e-1732.41Chlorophyll a-b binding protein M9, chloroplastic ... [more]
CB25_NICPL1.652e-1733.33Chlorophyll a-b binding protein E, chloroplastic O... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-071-F05-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY664891 ID=EY664891; Name=EY664891; organism=Citrus sinensis; type=EST; length=844bp
CTCCCGACTGAGCAAAGCTTTGTCATCTTCATTCTCATCCATGGCCCTAG
CCATTGCTTCTACAGCACTTTCGACCCTCCCATTCAGCAGGTGCAGGGAC
ATACCTCAGAAACGTTTTACAGAGAAGATTACAAAATGCCTAGTGGGAAG
AGGTGGTGTGATAGTGAATGCAACAAAAGGAGTGTCAAGTGTTTGTGAAC
CGCTCCCTCCGGACAGACCATTGTGGTTCCCTGGCAGCACACCGCCCTCT
TGGCTTGATGGCAGCCTTCCGGGAGATTATGGCTTCGATCCTCTTGGATT
AGGGTCTGATCCAGAGTTGCTTAAATGGTTTGCTCAAGCTGAGCTAATTC
ACGGCAGGTGGGCAATGCTGGCTGTGGCTGGAATCCTCATACCAGAATGG
CTTGAAAGCATTGGCCTCATTGAGAACTTCTCATGGTACGATGCTGGTTC
TCGTGAATACTTTGCAGACCCCACAACTTTATTTGTGGTTCAGTTGGCCC
TGATGGGATGGGTAGAAGGCAGAAGATGGGCTGATATAATTAATCCAGGA
TGTGTTGACATTCAACCAGATCTCCCATACAAGACAAAGCCGAAGCCAGA
TGTTGGCTACCCTGGTGGGATATGGTTTGATCCCATGATGTGGGGAAAGA
GGTCCCCANAGCCTGTGATGGTGTTGAGGACTAAGGGANNNTAAGATGGG
CGTCTTGCTATGCTAGCTTTTCGTGGCTTCTGCTTTCAGCCATTTATCAG
GGCAGGGTCCCCTTTGAAACTGGCTTTGCATGTGCAAATCCTGGTCATTG
CACGNATTCTGGCTTTACATNACATGATGCTTGGATTGGACTGA
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