EY664891
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY664891 vs. ExPASy Swiss-Prot
Match: CB24_TOBAC (Chlorophyll a-b binding protein 40, chloroplastic OS=Nicotiana tabacum GN=CAB40 PE=2 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 1.652e-17 Identity = 80/244 (32.79%), Postives = 111/244 (45.49%), Query Frame = 2 Query: 140 LVGRGGVIVNAT----KGVSSVCEPLPPDRPLW---FPGSTPPSWLDGSLPGDYGFDPLGLGSDPELLKWFAQAELIHGRWAMLAVAGILIPEWLESIGL-IENFSWYDAGSR-------EYFADPT--------TLFVVQLALMGWVEGRRWA-----DIINPGCVDIQPDLPYKTKPKPDVGYPGGIWFDPMMWGKRSPXPVMVLRTKGX*DGRLAMLAFRGFCFQPFIRAGSPLK-LALHV 784 + G G V + T K VSS PDR + F G +P S+L G PGDYG+D GL +DPE + E+IH RWAML G + PE L G+ W+ AGS+ +Y +P+ ++ Q+ LMG VEG R A ++++P YPGG FDP+ + P L+ K +GRLAM + GF Q + PL+ LA H+ Sbjct: 27 ITGNGKVTMRKTASKAKTVSSGSPWYGPDRVKYLGPFSGESP-SYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEVVDP-------------------LYPGGS-FDPLGLAE-DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHL 248
BLAST of EY664891 vs. ExPASy Swiss-Prot
Match: CB28_PEA (Chlorophyll a-b binding protein 8, chloroplastic OS=Pisum sativum GN=CAB8 PE=1 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 2.158e-17 Identity = 77/230 (33.48%), Postives = 106/230 (46.09%), Query Frame = 2 Query: 173 TKGVSSVCEP-LPPDRPLW---FPGSTPPSWLDGSLPGDYGFDPLGLGSDPELLKWFAQAELIHGRWAMLAVAGILIPEWLESIGL-IENFSWYDAGSR-------EYFADPT--------TLFVVQLALMGWVEGRRWA-----DIINPGCVDIQPDLPYKTKPKPDVGYPGGIWFDPMMWGKRSPXPVMVLRTKGX*DGRLAMLAFRGFCFQPFIRAGSPLK-LALHV 784 TK V+S P PDR + F G +P S+L G PGDYG+D GL +DPE + E+IH RWAML G + PE L G+ W+ AGS+ +Y +P+ ++ Q+ LMG VEG R A ++++P YPGG FDP+ P L+ K +GRLAM + GF Q + PL+ LA H+ Sbjct: 42 TKKVASSGSPWYGPDRVKYLGPFSGESP-SYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRIAGGPLGEVVDP-------------------LYPGGS-FDPLGLAD-DPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHL 249
BLAST of EY664891 vs. ExPASy Swiss-Prot
Match: CB26_ARATH (Chlorophyll a-b binding protein CP26, chloroplastic OS=Arabidopsis thaliana GN=LHCB5 PE=2 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 2.158e-17 Identity = 74/225 (32.89%), Postives = 103/225 (45.78%), Query Frame = 2 Query: 173 TKGVSSVCEPLP----PDRPLWFPG-----STPPSWLDGSLPGDYGFDPLGLGSDPELLKWFAQAELIHGRWAMLAVAGILIPEWLESIGLI--ENFSWY-------DAGSREYFAD--PTTLFVVQLALMGWVEGRRWADIINPGCVDIQPDLPYKTKPKPDVGYPGGIWFDPMMWGKRSPXPVMVLRTKGX*DGRLAMLAFRGFCFQPFIRAGSPLK-LALHV 784 +K VS + L PDR ++ P S P +L+G + GDYG+DP GLG PE + ELIH RWAML AG +IPE L G W+ D + YF P L + +A + + G + I N +D + L +PGG FDP+ K P +L+ K +GRLAM A GF Q ++ P++ LA H+ Sbjct: 49 SKAVSETSDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEVAGDYGYDPFGLGKKPENFAKYQAFELIHARWAMLGAAGFIIPEALNKYGANCGPEAVWFKTGALLLDGNTLNYFGKNIPINLVLAVVAEVVLLGGAEYYRITNG--LDFEDKL-----------HPGGP-FDPLGLAK-DPEQGALLKVKEIKNGRLAMFAMLGFFIQAYVTGEGPVENLAKHL 258
BLAST of EY664891 vs. ExPASy Swiss-Prot
Match: CB22_PEA (Chlorophyll a-b binding protein AB80, chloroplastic OS=Pisum sativum GN=AB80 PE=1 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 2.158e-17 Identity = 77/230 (33.48%), Postives = 106/230 (46.09%), Query Frame = 2 Query: 173 TKGVSSVCEP-LPPDRPLW---FPGSTPPSWLDGSLPGDYGFDPLGLGSDPELLKWFAQAELIHGRWAMLAVAGILIPEWLESIGL-IENFSWYDAGSR-------EYFADPT--------TLFVVQLALMGWVEGRRWA-----DIINPGCVDIQPDLPYKTKPKPDVGYPGGIWFDPMMWGKRSPXPVMVLRTKGX*DGRLAMLAFRGFCFQPFIRAGSPLK-LALHV 784 TK V+S P PDR + F G +P S+L G PGDYG+D GL +DPE + E+IH RWAML G + PE L G+ W+ AGS+ +Y +P+ ++ Q+ LMG VEG R A ++++P YPGG FDP+ P L+ K +GRLAM + GF Q + PL+ LA H+ Sbjct: 43 TKKVASSGSPWYGPDRVKYLGPFSGESP-SYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRIAGGPLGEVVDP-------------------LYPGGS-FDPLGLAD-DPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHL 250
BLAST of EY664891 vs. ExPASy Swiss-Prot
Match: CB21_TOBAC (Chlorophyll a-b binding protein 16, chloroplastic OS=Nicotiana tabacum GN=CAB16 PE=2 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 2.158e-17 Identity = 80/244 (32.79%), Postives = 111/244 (45.49%), Query Frame = 2 Query: 140 LVGRGGVIVNAT----KGVSSVCEPLPPDRPLW---FPGSTPPSWLDGSLPGDYGFDPLGLGSDPELLKWFAQAELIHGRWAMLAVAGILIPEWLESIGL-IENFSWYDAGSR-------EYFADPT--------TLFVVQLALMGWVEGRRWA-----DIINPGCVDIQPDLPYKTKPKPDVGYPGGIWFDPMMWGKRSPXPVMVLRTKGX*DGRLAMLAFRGFCFQPFIRAGSPLK-LALHV 784 + G G V + T K VSS PDR + F G +P S+L G PGDYG+D GL +DPE + E+IH RWAML G + PE L G+ W+ AGS+ +Y +P+ ++ Q+ LMG VEG R A ++++P YPGG FDP+ + P L+ K +GRLAM + GF Q + PL+ LA H+ Sbjct: 26 VTGNGKVTMRKTASKAKPVSSGSPWYGPDRVKYLGPFSGESP-SYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEVVDP-------------------LYPGGS-FDPLGLAE-DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHL 247
BLAST of EY664891 vs. ExPASy Swiss-Prot
Match: CB2A_SPIOL (Chlorophyll a-b binding protein, chloroplastic OS=Spinacia oleracea PE=1 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 2.818e-17 Identity = 78/244 (31.97%), Postives = 110/244 (45.08%), Query Frame = 2 Query: 140 LVGRGGVIVNATKG----VSSVCEPLPPDRPLW---FPGSTPPSWLDGSLPGDYGFDPLGLGSDPELLKWFAQAELIHGRWAMLAVAGILIPEWLESIGL-IENFSWYDAGSR-------EYFADPT--------TLFVVQLALMGWVEGRRWA-----DIINPGCVDIQPDLPYKTKPKPDVGYPGGIWFDPMMWGKRSPXPVMVLRTKGX*DGRLAMLAFRGFCFQPFIRAGSPLK-LALHV 784 ++G G + + T G V S PDR + F G +P S+L G PGDYG+D GL +DPE + E+IH RWAML G + PE L G+ W+ AGS+ +Y +P+ ++ Q+ LMG VEG R A ++++P YPGG FDP+ P L+ K +GRLAM + GF Q + PL+ LA H+ Sbjct: 27 IIGEGRITMRKTAGKPKTVQSSSPWYGPDRVKYLGPFSGESP-SYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRIAGGPLGEVVDP-------------------LYPGGS-FDPLGLAD-DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHL 248
BLAST of EY664891 vs. ExPASy Swiss-Prot
Match: CB23_HORVU (Chlorophyll a-b binding protein of LHCII type III, chloroplastic OS=Hordeum vulgare GN=LHBC PE=2 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 2.818e-17 Identity = 64/192 (33.33%), Postives = 90/192 (46.88%), Query Frame = 2 Query: 245 PSWLDGSLPGDYGFDPLGLGSDPELLKWFAQAELIHGRWAMLAVAGILIPEWLES-IGL-IENFSWYDAGSR-------EYFADPTTLFV--------VQLALMGWVEGRRWADIINPGCVDIQPDLPYKTKPKPDVGYPGGIWFDPMMWGKRSPXPVMVLRTKGX*DGRLAMLAFRGFCFQPFIRAGSPLK 769 PS+L+G PGDYG+D GL +DPE E+IHGRWAML G + PE L+ +G+ + W+ AGS+ +Y +P + Q+ LMG VEG R + G + + YPGG +FDP+ P L+ K +GRLAM + GF Q + PL+ Sbjct: 67 PSYLNGEFPGDYGWDTAGLSADPEAFARNRALEVIHGRWAMLGALGCVFPEVLQKWVGVEFKEPVWFKAGSQIFSEGGLDYLGNPNLVHAQSILAVLGFQVLLMGLVEGFRINGLDGVG--------------EGNDLYPGGQYFDPLGLAD-DPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLE 243
BLAST of EY664891 vs. ExPASy Swiss-Prot
Match: CB22_TOBAC (Chlorophyll a-b binding protein 21, chloroplastic OS=Nicotiana tabacum GN=CAB21 PE=2 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 2.818e-17 Identity = 79/242 (32.64%), Postives = 111/242 (45.87%), Query Frame = 2 Query: 140 LVGRGGVIVNAT--KGVSSVCEPLPPDRPLW---FPGSTPPSWLDGSLPGDYGFDPLGLGSDPELLKWFAQAELIHGRWAMLAVAGILIPEWLESIGL-IENFSWYDAGSR-------EYFADPT--------TLFVVQLALMGWVEGRRWA-----DIINPGCVDIQPDLPYKTKPKPDVGYPGGIWFDPMMWGKRSPXPVMVLRTKGX*DGRLAMLAFRGFCFQPFIRAGSPLK-LALHV 784 + G G V + T K V+S PDR + F G +P S+L G PGDYG+D GL +DPE + E+IH RWAML G + PE L G+ W+ AGS+ +Y +P+ ++ Q+ LMG VEG R A ++++P YPGG FDP+ + P L+ K +GRLAM + GF Q + PL+ LA H+ Sbjct: 27 ITGNGRVSMRKTVAKPVASSSPWYGPDRVKYLGPFSGESP-SYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVVDP-------------------LYPGGS-FDPLGLAE-DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHL 246
BLAST of EY664891 vs. ExPASy Swiss-Prot
Match: CB25_TOBAC (Chlorophyll a-b binding protein 50, chloroplastic OS=Nicotiana tabacum GN=CAB50 PE=2 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 3.681e-17 Identity = 79/244 (32.38%), Postives = 111/244 (45.49%), Query Frame = 2 Query: 140 LVGRGGVIVNAT----KGVSSVCEPLPPDRPLW---FPGSTPPSWLDGSLPGDYGFDPLGLGSDPELLKWFAQAELIHGRWAMLAVAGILIPEWLESIGL-IENFSWYDAGSR-------EYFADPT--------TLFVVQLALMGWVEGRRWA-----DIINPGCVDIQPDLPYKTKPKPDVGYPGGIWFDPMMWGKRSPXPVMVLRTKGX*DGRLAMLAFRGFCFQPFIRAGSPLK-LALHV 784 + G G V + T K +SS PDR + F G +P S+L G PGDYG+D GL +DPE + E+IH RWAML G + PE L G+ W+ AGS+ +Y +P+ ++ Q+ LMG VEG R A ++++P YPGG FDP+ + P L+ K +GRLAM + GF Q + PL+ LA H+ Sbjct: 27 ITGNGKVTMRKTVTKAKPLSSGSPWYGPDRVKYLGPFSGESP-SYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEVVDP-------------------LYPGGS-FDPLGLAE-DPEAFAELKVKHIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHL 248
BLAST of EY664891 vs. ExPASy Swiss-Prot
Match: CB2B_PINSY (Chlorophyll a-b binding protein type 2 member 1B, chloroplastic OS=Pinus sylvestris PE=2 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 4.807e-17 Identity = 74/212 (34.91%), Postives = 100/212 (47.17%), Query Frame = 2 Query: 209 PDRPLW---FPGSTPPSWLDGSLPGDYGFDPLGLGSDPELLKWFAQAELIHGRWAMLAVAGILIPEWLESIGL-IENFSWYDAGSR-------EYFADPT--------TLFVVQLALMGWVEGRRWADIINPGCVDIQPDLPYKTKPKPDVGYPGGIWFDPMMWGKRSPXPVMVLRTKGX*DGRLAMLAFRGFCFQPFIRAGSPLK-LALHV 784 PDR L+ F G PPS+L G PGDYG+D GL +DPE + E+IH RWAML G + PE L G+ W+ AG++ +Y +P+ ++ Q+ LMG VEG R A L T P YPGG FDP+ + P L+ K +GRLAM + GF Q + P++ LA H+ Sbjct: 61 PDRVLYLGPFSGE-PPSYLTGEFPGDYGWDTAGLSADPENFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRIAG----------GPLGEVTDPI----YPGGS-FDPLGLAE-DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLADHL 255 The following BLAST results are available for this feature:
BLAST of EY664891 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 73
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Sequences
The
following sequences are available for this feature:
EST sequence >EY664891 ID=EY664891; Name=EY664891; organism=Citrus sinensis; type=EST; length=844bpback to top |