EY664891
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY664891 vs. ExPASy Swiss-Prot
Match: CB27_TOBAC (Chlorophyll a-b binding protein 7, chloroplastic OS=Nicotiana tabacum GN=CAB7 PE=3 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 4.807e-17 Identity = 78/232 (33.62%), Postives = 102/232 (43.97%), Query Frame = 2 Query: 140 LVGRGGVIVNAT----KGVSSVCEPLPPDRPLW---FPGSTPPSWLDGSLPGDYGFDPLGLGSDPELLKWFAQAELIHGRWAMLAVAGILIPEWLESIGL-IENFSWYDAGSR-------EYFADPT--------TLFVVQLALMGWVEGRRWADIINPGCVDIQPDLPYKTKPKPDVGYPGGIWFDPMMWGKRSPXPVMVLRTKGX*DGRLAMLAFRGFCFQPFIRAGSPL 766 + G G I+ T K VSS PDR + F G P S+L G PGDYG+D GL +DPE + E+IH RWAML G + PE L G+ W+ AGS+ +Y +P+ ++ Q+ LMG +EG R A L T P YPGG FDP+ P L+ K +GRLAM + GF Q + PL Sbjct: 27 ITGNGKAIMRKTVTKAKPVSSGSPWYGPDRVKYLGPFSGEAP-SYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAIEGYRVAG----------GPLGEVTDPL----YPGGS-FDPLGLAD-DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPL 241
BLAST of EY664891 vs. ExPASy Swiss-Prot
Match: CB2_PHYPA (Chlorophyll a-b binding protein, chloroplastic OS=Physcomitrella patens PE=3 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 6.278e-17 Identity = 72/205 (35.12%), Postives = 94/205 (45.85%), Query Frame = 2 Query: 212 DRPLW---FPGSTPPSWLDGSLPGDYGFDPLGLGSDPELLKWFAQAELIHGRWAMLAVAGILIPEWLESIGL-IENFSWYDAGSR-------EYFADPT--------TLFVVQLALMGWVEGRRWADIINPGCVDIQPDLPYKTKPKPDVGYPGGIWFDPMMWGKRSPXPVMVLRTKGX*DGRLAMLAFRGFCFQPFIRAGSPLK 769 DRP + F G TP S+L+G GDYG+D GL SDPE + E+IH RWAML G L PE L G+ W+ AG++ +Y +P+ ++ Q+ LMG VEG R A L T P YPGG FDP+ P L+ K +GRLAM + GF Q + PL+ Sbjct: 56 DRPKFLGPFSGETP-SYLNGEFAGDYGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCLTPELLAKSGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAG----------GPLGEVTDPI----YPGGS-FDPLGLAD-DPDTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLE 243
BLAST of EY664891 vs. ExPASy Swiss-Prot
Match: CB23_APIGR (Chlorophyll a-b binding protein, chloroplastic OS=Apium graveolens GN=LHC0 PE=1 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 6.278e-17 Identity = 80/241 (33.20%), Postives = 109/241 (45.23%), Query Frame = 2 Query: 140 LVGRGGVIVNAT-KGVSSVCEPLPPDRPLW---FPGSTPPSWLDGSLPGDYGFDPLGLGSDPELLKWFAQAELIHGRWAMLAVAGILIPEWLESIGL-IENFSWYDAGSR-------EYFADPT--------TLFVVQLALMGWVEGRRWA-----DIINPGCVDIQPDLPYKTKPKPDVGYPGGIWFDPMMWGKRSPXPVMVLRTKGX*DGRLAMLAFRGFCFQPFIRAGSPLK-LALHV 784 L G G V + T K S PDR + F G P S+L G PGDYG+D GL +DPE + E+IH RWAML G + PE L G+ W+ AGS+ +Y +P+ +++ Q+ LMG VEG R A +I++P YPGG FDP+ + P L+ K +GRLAM + GF Q + PL+ LA H+ Sbjct: 27 LFGNGRVSMRKTVKAPVSDSPWYGPDRVKYLGPFSGEAP-SYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILSIWATQVILMGAVEGYRVAGGPLGEIVDP-------------------LYPGGS-FDPLGLAE-DPERSAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHL 245
BLAST of EY664891 vs. ExPASy Swiss-Prot
Match: CB21_GOSHI (Chlorophyll a-b binding protein 151, chloroplastic OS=Gossypium hirsutum GN=CAB-151 PE=2 SV=2) HSP 1 Score: 88.1965 bits (217), Expect = 6.278e-17 Identity = 75/227 (33.04%), Postives = 101/227 (44.49%), Query Frame = 2 Query: 143 VGRGGVIVNATKGVSSVCEPLPPDRPLWF-PGSTP-PSWLDGSLPGDYGFDPLGLGSDPELLKWFAQAELIHGRWAMLAVAGILIPEWLESIGL-IENFSWYDAGSR-------EYFADPT--------TLFVVQLALMGWVEGRRWADIINPGCVDIQPDLPYKTKPKPDVGYPGGIWFDPMMWGKRSPXPVMVLRTKGX*DGRLAMLAFRGFCFQPFIRAGSPLK 769 VG G V + T + PDRP + P S PS+L G PGDYG+D GL +DPE + E+IH RWAML G + PE L G+ W+ AGS+ +Y +P ++ Q+ LMG+VEG R G + L D YPGG FDP+ P L+ K +GRLAM + GF Q + P++ Sbjct: 30 VGGGRVSMRRTVKSAPTSIWYGPDRPKYLGPFSDQIPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYR------VGGGPLGEGL--------DPIYPGGA-FDPLGLAD-DPDAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIE 240
BLAST of EY664891 vs. ExPASy Swiss-Prot
Match: CB2G_SOLLC (Chlorophyll a-b binding protein 3C, chloroplastic OS=Solanum lycopersicum GN=CAB3C PE=3 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 8.199e-17 Identity = 79/244 (32.38%), Postives = 109/244 (44.67%), Query Frame = 2 Query: 140 LVGRGGVIVNAT----KGVSSVCEPLPPDRPLW---FPGSTPPSWLDGSLPGDYGFDPLGLGSDPELLKWFAQAELIHGRWAMLAVAGILIPEWLESIGL-IENFSWYDAGSR-------EYFADPT--------TLFVVQLALMGWVEGRRWA-----DIINPGCVDIQPDLPYKTKPKPDVGYPGGIWFDPMMWGKRSPXPVMVLRTKGX*DGRLAMLAFRGFCFQPFIRAGSPLK-LALHV 784 + G G V + T K SS PDR + F G +P S+L G PGDYG+D GL +DPE + E+IH RWAML G + PE L G+ W+ AGS+ +Y +P+ ++ Q+ LMG VEG R A ++++P YPGG FDP+ P L+ K +GRLAM + GF Q + PL+ LA H+ Sbjct: 27 ITGNGRVTMRKTATKAKPASSGSPWYGPDRVKYLGPFSGESP-SYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVVDP-------------------LYPGGS-FDPLGLAD-DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHL 248
BLAST of EY664891 vs. ExPASy Swiss-Prot
Match: CB2A_PINSY (Chlorophyll a-b binding protein type 2 member 1A, chloroplastic OS=Pinus sylvestris PE=2 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 8.199e-17 Identity = 73/212 (34.43%), Postives = 97/212 (45.75%), Query Frame = 2 Query: 209 PDRPLW---FPGSTPPSWLDGSLPGDYGFDPLGLGSDPELLKWFAQAELIHGRWAMLAVAGILIPEWLESIGL-IENFSWYDAGSR-------EYFADP--------TTLFVVQLALMGWVEGRRWADIINPGCVDIQPDLPYKTKPKPDVGYPGGIWFDPMMWGKRSPXPVMVLRTKGX*DGRLAMLAFRGFCFQPFIRAGSPLK-LALHV 784 PDR L+ F G PPS+L G PGDYG+D GL +DPE + E+IH RWAML G + PE L G+ W+ AG++ +Y P ++ Q+ LMG +EG R A L T P YPGG FDP+ P L+ K +GRLAM + GF Q + P++ LA H+ Sbjct: 65 PDRVLYLGPFSGE-PPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGSPQLIHAQSILAIWACQVILMGAIEGYRVAG----------GPLGEVTDPI----YPGGN-FDPLGLAD-DPDAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLADHL 259
BLAST of EY664891 vs. ExPASy Swiss-Prot
Match: CB22_ARATH (Chlorophyll a-b binding protein 2, chloroplastic OS=Arabidopsis thaliana GN=CAB2A PE=1 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 8.199e-17 Identity = 75/242 (30.99%), Postives = 105/242 (43.39%), Query Frame = 2 Query: 140 LVGRGGVIVNATKGVSSVCEPLPPDRPLWFPGST----------PPSWLDGSLPGDYGFDPLGLGSDPELLKWFAQAELIHGRWAMLAVAGILIPEWLESIGL-IENFSWYDAGSR-------EYFADPT--------TLFVVQLALMGWVEGRRWADIINPGCVDIQPDLPYKTKPKPDVGYPGGIWFDPMMWGKRSPXPVMVLRTKGX*DGRLAMLAFRGFCFQPFIRAGSPLK-LALHV 784 ++G G V + T V +P P W+ PS+L G PGDYG+D GL +DPE + E+IH RWAML G + PE L G+ W+ AGS+ +Y +P+ ++ Q+ LMG VEG R A G + D+ YPGG FDP+ P L+ K +GRLAM + GF Q + P++ LA H+ Sbjct: 27 VLGSGRVTMRKT-----VAKPKGPSGSPWYGSDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSDGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRVAGNGPLGEAE-------------DLLYPGGS-FDPLGLA-TDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLADHL 248
BLAST of EY664891 vs. ExPASy Swiss-Prot
Match: CB21_ARATH (Chlorophyll a-b binding protein 165/180, chloroplastic OS=Arabidopsis thaliana GN=LHCP-A PE=1 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 8.199e-17 Identity = 75/242 (30.99%), Postives = 105/242 (43.39%), Query Frame = 2 Query: 140 LVGRGGVIVNATKGVSSVCEPLPPDRPLWFPGST----------PPSWLDGSLPGDYGFDPLGLGSDPELLKWFAQAELIHGRWAMLAVAGILIPEWLESIGL-IENFSWYDAGSR-------EYFADPT--------TLFVVQLALMGWVEGRRWADIINPGCVDIQPDLPYKTKPKPDVGYPGGIWFDPMMWGKRSPXPVMVLRTKGX*DGRLAMLAFRGFCFQPFIRAGSPLK-LALHV 784 ++G G V + T V +P P W+ PS+L G PGDYG+D GL +DPE + E+IH RWAML G + PE L G+ W+ AGS+ +Y +P+ ++ Q+ LMG VEG R A G + D+ YPGG FDP+ P L+ K +GRLAM + GF Q + P++ LA H+ Sbjct: 27 VLGSGRVTMRKT-----VAKPKGPSGSPWYGSDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSDGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRVAGNGPLGEAE-------------DLLYPGGS-FDPLGLA-TDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLADHL 248
BLAST of EY664891 vs. ExPASy Swiss-Prot
Match: CB22_CUCSA (Chlorophyll a-b binding protein of LHCII type 1 (Fragment) OS=Cucumis sativus PE=2 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 1.071e-16 Identity = 69/198 (34.85%), Postives = 91/198 (45.96%), Query Frame = 2 Query: 242 PPSWLDGSLPGDYGFDPLGLGSDPELLKWFAQAELIHGRWAMLAVAGILIPEWLESIGL-IENFSWYDAGSR-------EYFADPT--------TLFVVQLALMGWVEGRRWADIINPGCVDIQPDLPYKTKPKPDVGYPGGIWFDPMMWGKRSPXPVMVLRTKGX*DGRLAMLAFRGFCFQPFIRAGSPLK-LALHV 784 PPS+L G PGDYG+D GL +DPE + E+IH WAML G + PE L G+ W+ AGS+ +Y +P+ ++ Q+ LMG VEG R A L T P YPGG FDP+ P L+ K +GRLAM + GF Q + PL+ LA H+ Sbjct: 6 PPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSTWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAG----------GPLGEVTDPI----YPGGS-FDPLGLAD-DPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHL 187
BLAST of EY664891 vs. ExPASy Swiss-Prot
Match: CB2B_SOLLC (Chlorophyll a-b binding protein 1B, chloroplastic OS=Solanum lycopersicum GN=CAB1B PE=3 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 1.399e-16 Identity = 72/217 (33.18%), Postives = 101/217 (46.54%), Query Frame = 2 Query: 209 PDRPLW---FPGSTPPSWLDGSLPGDYGFDPLGLGSDPELLKWFAQAELIHGRWAMLAVAGILIPEWLESIGL-IENFSWYDAGSR-------EYFADPT--------TLFVVQLALMGWVEGRRWA-----DIINPGCVDIQPDLPYKTKPKPDVGYPGGIWFDPMMWGKRSPXPVMVLRTKGX*DGRLAMLAFRGFCFQPFIRAGSPLK-LALHV 784 PDR + F G +P S+L G PGDYG+D GL +DPE + E+IH RWAML G + PE L G+ W+ AGS+ +Y +P+ ++ Q+ LMG VEG R A ++++P YPGG FDP+ + P L+ K +GRLAM + GF Q + PL+ LA H+ Sbjct: 52 PDRVKYLGPFSGESP-SYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVVDP-------------------LYPGGS-FDPLGLAE-DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHL 246 The following BLAST results are available for this feature:
BLAST of EY664891 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 73
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Sequences
The
following sequences are available for this feature:
EST sequence >EY664891 ID=EY664891; Name=EY664891; organism=Citrus sinensis; type=EST; length=844bpback to top |