EY664890

Overview
NameEY664890
Unique NameEY664890
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length893
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY664890 vs. ExPASy Swiss-Prot
Match: Y1230_STAAN (Uncharacterized hydrolase SA1230 OS=Staphylococcus aureus (strain N315) GN=SA1230 PE=3 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 2.136e-26
Identity = 68/188 (36.17%), Postives = 106/188 (56.38%), Query Frame = 2
Query:  185 VNWMKKMRRQIHENPELAYEEFETSELIRRELDQLGIAYRWPVAKTGVVATVGSGSPPFVALRADMDALPIQELVEWEHKSKIDGKMHACGHDAHVAMLLGAAKILQEMRET--LKGTVVLIFQPAEERGTGAKDMIQESVLEN--VEAIFGLHLVHKYPTGVVASRPGDFLAGCGSFKAKISGKGCH 736
            + ++ K RR +H++PEL+  EFET+  I+  LD L I Y  P+ +TGV+A +       +A RAD+DALPI E  +  ++S+ D  MHACGHD H   L+   +  ++M++   L   VV IFQPAEE G GA  +I+    +   +EA+FG+H+      G+   R  +  A    ++  ++G   H
Sbjct:    4 LEFVTKHRRHLHQHPELSLHEFETTAYIKAFLDSLNIKYDCPL-ETGVIAYLEGNGSHTIAYRADIDALPILEENDVPYRSQSDHVMHACGHDGHTTALMLFVQRCKDMQDAGQLPQNVVFIFQPAEETGGGANRLIKAGAFDKYPIEAVFGIHVNPFADEGIAVIRDEEITASATEYRFFLTGLSSH 190          
BLAST of EY664890 vs. ExPASy Swiss-Prot
Match: DAPL_BACHD (Putative N-acetyldiaminopimelate deacetylase OS=Bacillus halodurans GN=dapL PE=3 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 2.790e-26
Identity = 82/240 (34.17%), Postives = 121/240 (50.42%), Query Frame = 2
Query:  203 MRRQIHENPELAYEEFETSELIRRELDQLGIAY----RWPVAKTGVVATVGSGS-PPFVALRADMDALPIQELVEWEHKSKIDGKMHACGHDAHVAMLLGAAK-ILQEMRETLKGTVVLIFQPAEERGTGAKDMI--QESVLENVEAIFGLHLVHKYPTGVVASRPGDFLAGCGSFKAKISGKGCHAXIPHTA--LIHFGSFIVSH*LADIXXREIDPIDXQVVSGAMINGRESYNMIPD 892
            +RR +H  PEL +EE++T   +   +  L   +     W   KTG++  VG       VA RADMD LPI E       S+ +G+MHACGHD H+ +  G  +       ET    ++ IFQPAEE   GAK M+  +E  +   + I  LH+  +YP G +A+R G   A        + G+G HA  PH A  ++   S +V+  L  +  R +DP+D  VV+  +I G    N+I +
Sbjct:    8 VRRALHRIPELGFEEYKTQTYLLDLIQSLPQDFLEVKTW---KTGILVRVGGRKGEKTVAYRADMDGLPITEETGLPFVSQHEGRMHACGHDLHMTIAFGLLRHFAYHQPET---HLLFIFQPAEEGPGGAKPMLDSEEFRMWWPDEIIALHIAPEYPVGTIATRKGLLFANTSELFIDLKGQGGHAAYPHLANDMVVAASHLVTQ-LQSVVSRNVDPLDSAVVTIGVIKGGTKQNIIAE 240          
BLAST of EY664890 vs. ExPASy Swiss-Prot
Match: Y1078_STAES (Uncharacterized hydrolase SE_1078 OS=Staphylococcus epidermidis (strain ATCC 12228) GN=SE_1078 PE=3 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 3.643e-26
Identity = 70/181 (38.67%), Postives = 98/181 (54.14%), Query Frame = 2
Query:  206 RRQIHENPELAYEEFETSELIRRELDQLGIAYRWPVAKTGVVATVGSGSPPFVALRADMDALPIQELVEWEHKSKIDGKMHACGHDAHVAMLLGAAKILQEM--RETLKGTVVLIFQPAEERGTGAKDMIQESVLEN--VEAIFGLHLVHKYPTGVVASRPGDFLAGCGSFKAKISGKGCH 736
            RR +H+ PEL+  EFET+  I   L+ LG+ Y  P+ KTGV+A +   S   +A RAD+DALPI E  + + KSK D  MHACGHD H   L+   K  + +  +  L   VV IFQPAEE G GA  +I+    +   +EA+FG H+      G +  R  +  A    ++  + G   H
Sbjct:   11 RRHLHQYPELSLHEFETTSYITSFLEDLGVPYDRPL-KTGVIAYLEGNSHHTIAFRADIDALPIYEENDIDFKSKNDNVMHACGHDGHTTALMLFVKRCKALYDKSELPHNVVFIFQPAEETGGGANRLIKAGAFDKYPIEAVFGFHVNPFEKEGKIVIRDEEITASATEYRFFLKGLSSH 190          
BLAST of EY664890 vs. ExPASy Swiss-Prot
Match: DAPL_ANOFW (Putative N-acetyldiaminopimelate deacetylase OS=Anoxybacillus flavithermus (strain DSM 21510 / WK1) GN=dapL PE=3 SV=2)

HSP 1 Score: 119.013 bits (297), Expect = 3.643e-26
Identity = 74/237 (31.22%), Postives = 120/237 (50.63%), Query Frame = 2
Query:  203 MRRQIHENPELAYEEFETSELIRRELDQL-GIAYRWPVAKTGVVATV-GSGSPPFVALRADMDALPIQELVEWEHKSKIDGKMHACGHDAHVAMLLGAAKILQEMRETLKGTVVLIFQPAEERGTGAKDMIQESVLEN--VEAIFGLHLVHKYPTGVVASRPGDFLAGCGSFKAKISGKGCHAXIPHTA---LIHFGSFIVSH*LADIXXREIDPIDXQVVSGAMINGRESYNMIPD 892
            +RR +H+ PEL ++EF+T + I   L  L     +    +TG++  V G+     +  RADMD LPI E  +   +S  +G+MHACGHD H+A+ LG   +   +   ++  ++ IFQPAEE   GA  M++   ++    + I  LH+   YP G +A++ G   A        + GKG HA  PH     ++   S I+   L  I  R ++P+D  V++   +      N+I +
Sbjct:    5 IRRDLHQIPELGFQEFKTQQYILDYLATLPSERLQIKTWRTGILVRVHGTAPTKTIGYRADMDGLPIDEQTDVPFRSTHEGRMHACGHDMHMAIALGV--LTHVVHHPIRDDMLFIFQPAEEGPGGALPMLESDEMKQWMPDMILALHIAPAYPVGTIATKEGLLFANTSELFIDLIGKGGHAAFPHETKDMVVAASSLIMQ--LQTIVSRNVNPLDSAVITIGKLTSGTVQNVIAE 237          
BLAST of EY664890 vs. ExPASy Swiss-Prot
Match: Y968_STAEQ (Uncharacterized hydrolase SERP0968 OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=SERP0968 PE=3 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 6.215e-26
Identity = 70/181 (38.67%), Postives = 98/181 (54.14%), Query Frame = 2
Query:  206 RRQIHENPELAYEEFETSELIRRELDQLGIAYRWPVAKTGVVATVGSGSPPFVALRADMDALPIQELVEWEHKSKIDGKMHACGHDAHVAMLLGAAKILQEM--RETLKGTVVLIFQPAEERGTGAKDMIQESVLEN--VEAIFGLHLVHKYPTGVVASRPGDFLAGCGSFKAKISGKGCH 736
            RR +H+ PEL+  EFET+  I   L+ LG+ Y  P+ KTGV+A +   S   +A RAD+DALPI E  + + KSK D  MHACGHD H   L+   K  + +  +  L   VV IFQPAEE G GA  +I+    +   +EA+FG H+      G +  R  +  A    ++  + G   H
Sbjct:   11 RRHLHQYPELSLHEFETTSYITSFLEDLGVPYDRPL-KTGVIAYLEGNSHHTIAFRADIDALPIYEENDIDFKSKNDHVMHACGHDGHTTALMLFVKRCKALYDKSELPHNVVFIFQPAEETGGGANRLIKAGAFDKYPIEAVFGFHVNPFEKEGKIVIRDEEITASATEYRFFLKGLSSH 190          
BLAST of EY664890 vs. ExPASy Swiss-Prot
Match: DAPL_LISW6 (Putative N-acetyldiaminopimelate deacetylase OS=Listeria welshimeri serovar 6b (strain ATCC 35897 / DSM 20650 / SLCC5334) GN=dapL PE=3 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 8.116e-26
Identity = 77/239 (32.22%), Postives = 119/239 (49.79%), Query Frame = 2
Query:  203 MRRQIHENPELAYEEFETSELIRRELDQLGIAY----RWPVAKTGVVATVGSGSPP-FVALRADMDALPIQELVEWEHKSKIDGKMHACGHDAHVAMLLGAAKILQEMRETLKGTVVLIFQPAEERGTGAKDMI--QESVLENVEAIFGLHLVHKYPTGVVASRPGDFLAGCGSFKAKISGKGCHAXIPHTA--LIHFGSFIVSH*LADIXXREIDPIDXQVVSGAMINGRESYNMIPD 892
            +RR +H+ PE  Y+E +T   +   + +L   +    +W   +TG++  V    P   +  R D+DALPI E      +S   G MHACGHD H+++ LG   +     +  K  ++ +FQPAEE   GAK ++  +E      + I+GLH+  +Y  G +A +PG   A          GKG HA  PH A  ++   S  V   +  I  R IDP+D  V++   I+G E  N+I +
Sbjct:    8 IRRDLHQIPETGYKELKTQAYLLAYISKLPNKHLEVKKW---RTGILVLVKGTKPEKTIGYRTDIDALPITEETGLPFESNHVGNMHACGHDLHMSIALGV--LTHFASKPAKDNLLFVFQPAEEGPGGAKPIMESEEFAAWRPDTIYGLHIAPEYKVGEIAIKPGLLFANTSELFISFKGKGGHAAYPHLANDMVVAASAFVGQ-MQTIISRNIDPMDSAVITIGRIHGGEIQNVIAE 240          
BLAST of EY664890 vs. ExPASy Swiss-Prot
Match: DAPL_BACA2 (Putative N-acetyldiaminopimelate deacetylase OS=Bacillus amyloliquefaciens (strain FZB42) GN=dapL PE=3 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 1.060e-25
Identity = 75/236 (31.78%), Postives = 122/236 (51.69%), Query Frame = 2
Query:  203 MRRQIHENPELAYEEFETSELIRRELDQLGIA-YRWPVAKTGVVATVGSGSPP-FVALRADMDALPIQELVEWEHKSKIDGKMHACGHDAHVAMLLGAAKILQEMRETLKGTVVLIFQPAEERGTGAKDMIQESVLE--NVEAIFGLHLVHKYPTGVVASRPGDFLAGCGSFKAKISGKGCHAXIPHTA--LIHFGSFIVSH*LADIXXREIDPIDXQVVSGAMINGRESYNMIPD 892
            +RR +H  PE+ ++E++T + +   L+Q           +TG+   V   +P   +A RAD+DAL I+E       S+  G MHACGHD H+ + LG   I   +   +K  ++ +FQPAEE   GA+ M++  VL+    + I  LH+  + P G ++++ G   A        + GKG HA  PHTA  ++   S +V+  L  +  R  DP+D  V++   I G  + N+I +
Sbjct:    9 IRRDLHRIPEIGFQEYKTQQYLLNLLNQYPEERIEIETWRTGIFVKVNGTAPEKMLAYRADIDALSIEEQTGLPFASEHPGFMHACGHDMHMTIALGI--IDHFVHHPVKHDLLFLFQPAEEGPGGAEPMLESDVLKKWTPDLITALHIAPELPVGTISTKSGLLFANTSELVIDLEGKGGHAAYPHTADDMVVAASTLVTQ-LQTVISRNTDPLDSAVITVGTITGGTAQNIIAE 241          
BLAST of EY664890 vs. ExPASy Swiss-Prot
Match: DAPL_LEUMM (Putative N-acetyldiaminopimelate deacetylase OS=Leuconostoc mesenteroides subsp. mesenteroides (strain ATCC 8293 / NCDO 523) GN=dapL PE=3 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 1.808e-25
Identity = 78/252 (30.95%), Postives = 124/252 (49.21%), Query Frame = 2
Query:  170 NDQDTVNWMKKMRRQIHENPELAYEEFETSELIRRELDQ-----LGIAYRWPVAKTGVVATVGSGSPPFVALRADMDALPIQELVEWEHKSKIDGKMHACGHDAHVAMLLGAAKILQEMRETLKGTVVLIFQPAEERGTGAKDMIQESVLE---NVEAIFGLHLVHKYPTGVVASRPGDFLAGCGSFKAKISGKGCHAXIPHTA---LIHFGSFIVSH*LADIXXREIDPIDXQVVSGAMINGRESYNMIPD 892
            N++D    +K  RR +H+ PELA  EF+T   +  ++       + I     +    +V   G+     V  RAD+DALP+ E      +S   G MHACGHD H+++ LG  +   E +   K  +++ FQPAEE  +G K  +   + E   + +  +G+H     P G +++  G   AG    +  I G+G HA  PH     ++     I+   L  +  R++DPI+  VVS  MI+G  + N+IPD
Sbjct:    4 NEED----LKTYRRDLHKIPELALAEFKTHRYLLEKIQSWQTNFMTIRQVEELPTAMLVKFSGTDPSRTVGYRADIDALPVTEDTGLPFESTHKGVMHACGHDVHMSLALGLVQYFSEHQP--KDNLIVFFQPAEESKSGGKLAVDLGIFEGEWHPDEFYGIHDQPNLPAGTLSTLAGTLFAGTAELEIDIHGQGGHAAYPHLGKDPIVISAELIML--LQTVVSRDVDPIEGGVVSLGMISGGFTNNVIPD 247          
BLAST of EY664890 vs. ExPASy Swiss-Prot
Match: DAPL_PEDPA (Putative N-acetyldiaminopimelate deacetylase OS=Pediococcus pentosaceus (strain ATCC 25745 / 183-1w) GN=dapL PE=3 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 3.084e-25
Identity = 76/241 (31.54%), Postives = 120/241 (49.79%), Query Frame = 2
Query:  200 KMRRQIHENPELAYEEFETSELIR---RELDQLGIAYRW-PVAKTGVVATVGSGSPP-FVALRADMDALPIQELVEWEHKSKIDGKMHACGHDAHVAMLLGAAKILQEMRETLKGTVVLIFQPAEERGTGAKDMIQESVLEN---VEAIFGLHLVHKYPTGVVASRPGDFLAGCGSFKAKISGKGCHAXIPHTA--LIHFGSFIVSH*LADIXXREIDPIDXQVVSGAMINGRESYNMIPD 892
            ++RRQ HE+PELA +EF+T  L+    R L Q  +  +  P   T ++  V    P   +  RAD+DALP+ E    +  SK  G MHACGHD H+ + LG  +     +   +  ++  FQPAEE  +G+      ++  N       +GLH     P GV+  R G   AG      K++GKG HA  P  A  ++   +++++  L  I  R ++PI+  V++   ++     N+I D
Sbjct:   10 RIRRQFHESPELALKEFQTHALLLSVIRSLPQNLLEIKTIPELPTALLVRVAGSHPHRTIGYRADIDALPVNEKTGLDFASKTPGIMHACGHDIHMTVALGILEYFANHQP--QDNLIFFFQPAEESHSGSVRAFNANIFTNQFRPNEFYGLHSTPTLPAGVIGCRMGTLFAGTTEVNLKLTGKGGHAAYPQDANDMVVAQAYLITQ-LQTIVARNVNPIEGGVLTLGKVSAGNVRNVIAD 247          
BLAST of EY664890 vs. ExPASy Swiss-Prot
Match: DAPL_OENOB (Putative N-acetyldiaminopimelate deacetylase OS=Oenococcus oeni (strain BAA-331 / PSU-1) GN=dapL PE=3 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 3.084e-25
Identity = 74/240 (30.83%), Postives = 115/240 (47.92%), Query Frame = 2
Query:  200 KMRRQIHENPELAYEEFETSELIRREL-----DQLGIAYRWPVAKTGVVATVGSGSPPFVALRADMDALPIQELVEWEHKSKIDGKMHACGHDAHVAMLLGAAKILQEMRETLKGTVVLIFQPAEERGTGAKDMIQESVLEN---VEAIFGLHLVHKYPTGVVASRPGDFLAGCGSFKAKISGKGCHAXIPHTA---LIHFGSFIVSH*LADIXXREIDPIDXQVVSGAMINGRESYNMI 886
            K+RR +H NPE+  +E +T + +  ++     + L I     +    +V   GS     +ALR DMDALPIQE    +  SK D  MHACGHD H+ + LG      + +   K  +++ FQPAEE   G K        +     +  + LH+  + P G +ASR G   AG    +    GK  HA  P  A   ++   +F+ +  +  +  R +DPI+  VV+    N  ++ N+I
Sbjct:    9 KIRRHLHANPEIGMQEVKTHQFLLEQIAKFPQENLTIETISEIPTALLVRIAGSDPKRTIALRTDMDALPIQEETGLDFASKNDHVMHACGHDIHMTVALGILSYFAKHQP--KDNLLVFFQPAEENEFGGKRFYDAGGFQGEYLPDEFYALHVNPQLPAGQIASRKGTLFAGSNELRISFIGKSGHAAYPQNAKDSIVAAANFVTN--VQTVVSRNVDPIEGGVVTIGKFNAGKAMNII 244          
The following BLAST results are available for this feature:
BLAST of EY664890 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 117
Match NameE-valueIdentityDescription
Y1230_STAAN2.136e-2636.17Uncharacterized hydrolase SA1230 OS=Staphylococcus... [more]
DAPL_BACHD2.790e-2634.17Putative N-acetyldiaminopimelate deacetylase OS=Ba... [more]
Y1078_STAES3.643e-2638.67Uncharacterized hydrolase SE_1078 OS=Staphylococcu... [more]
DAPL_ANOFW3.643e-2631.22Putative N-acetyldiaminopimelate deacetylase OS=An... [more]
Y968_STAEQ6.215e-2638.67Uncharacterized hydrolase SERP0968 OS=Staphylococc... [more]
DAPL_LISW68.116e-2632.22Putative N-acetyldiaminopimelate deacetylase OS=Li... [more]
DAPL_BACA21.060e-2531.78Putative N-acetyldiaminopimelate deacetylase OS=Ba... [more]
DAPL_LEUMM1.808e-2530.95Putative N-acetyldiaminopimelate deacetylase OS=Le... [more]
DAPL_PEDPA3.084e-2531.54Putative N-acetyldiaminopimelate deacetylase OS=Pe... [more]
DAPL_OENOB3.084e-2530.83Putative N-acetyldiaminopimelate deacetylase OS=Oe... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-071-F04-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY664890 ID=EY664890; Name=EY664890; organism=Citrus sinensis; type=EST; length=893bp
CAACTTGGCAATGGCTTTTCATCCACTACGACACGCTCTCTTCATCTTCA
TCTCCATAACTATCTTTGCTTCTTTGAACTTTCTGCTTTCTTCTAACGAA
AAGAGCTTGAATTTTCAAACAAGCAAAAGTCAAAATAGTTCCATAAAAAG
CCGGATAATTGAGCTGGCCAATGATCAAGACACGGTGAACTGGATGAAAA
AGATGAGGAGGCAAATTCATGAGAACCCAGAACTTGCTTACGAAGAGTTT
GAGACCAGTGAGCTCATTAGGCGAGAACTTGACCAACTTGGTATTGCTTA
TCGATGGCCAGTAGCAAAGACTGGTGTTGTGGCCACCGTTGGATCTGGCT
CTCCTCCTTTTGTTGCTTTAAGAGCGGATATGGATGCTTTGCCAATTCAG
GAATTGGTAGAATGGGAACACAAGAGCAAAATAGATGGGAAAATGCATGC
CTGTGGCCATGATGCGCATGTCGCAATGCTCCTTGGTGCTGCAAAGATTC
TGCAAGAAATGCGTGAAACATTGAAGGGCACTGTCGTTCTCATATTTCAA
CCAGCTGAGGAACGAGGAACAGGTGCAAAAGATATGATTCAAGAAAGTGT
TCTTGAAAATGTAGAGGCCATTTTTGGATTGCATTTGGTGCATAAGTATC
CCACTGGCGTTGTTGCTTCACGGCCTGGAGATTTTCTAGCTGGTTGTGGG
AGCTTTAAGGCCAAAATCAGTGGTAAAGGATGCCATGCTGNCATCCCACA
CACTGCATTGATCCATTTTGGCAGTTTCATCGTCAGTCATTAGCTTGCAG
ATATTNGTTNCAGGGAAATAGACCCNATAGATNCTCAGGTGGTTTCGGGA
GCTATGATCAATGGGAGGGAGTCATACAACATGATCCCAGACC
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