EY664886

Overview
NameEY664886
Unique NameEY664886
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length528
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig3571 contig Csv1_Contig3571:447..977. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY664886 vs. ExPASy Swiss-Prot
Match: METE_RHOPA (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Rhodopseudomonas palustris GN=metE PE=3 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 3.377e-17
Identity = 49/124 (39.52%), Postives = 65/124 (52.42%), Query Frame = 2
Query:    2 FIVPELGPDVKFSYASHKAVTEYKEAKGLGVETVPVLIGPVSYLLLSKPAKGVAKTFXXXXXXXXXXXXXXEVISELKAAGASWIQFDEPLLVMDLDSHXIAAFSEAYAELESTLSGLMFLVRT 373
            ++VPE      F  AS K + EY+EAK LG +T PVL+GPV+YL L K A                     E++  L AAGA W+Q DEP LV+DLD     AF +AY ++   L  L  ++ T
Sbjct:  148 YMVPEFSAGQSFQLASVKPLEEYREAKALGYDTRPVLLGPVTYLKLGKSADA---GLDVLSLLPKLVPVYIEILGRLAAAGAKWVQLDEPALVLDLDDRERLAFRDAYGQIARELPHLDIMLTT 268          
BLAST of EY664886 vs. ExPASy Swiss-Prot
Match: METE_XYLFT (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Xylella fastidiosa (strain Temecula1 / ATCC 700964) GN=metE PE=3 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 5.760e-17
Identity = 58/164 (35.37%), Postives = 81/164 (49.39%), Query Frame = 2
Query:    2 FIVPELGPDVKFSYASHKAVTEYKEAKGLGVETVPVLIGPVSYLLLSKPAKGVAKTFXXXXXXXXXXXXXXEVISELKAAGASWIQFDEPLLVMDLDSHXIAAFSEAYAELESTLSGLMFLVR-------TTLLMFQLRHSXPHFFEGVTAYGFDLVRGTKPLD 472
            ++VPEL  D  F+   +K + E++EA  LG+ T PVL+GPVS+LLLSK   G  +                +++ +L+ +GA W+Q DEP LV+DLD+    AF +AYA L       + L            L  QL     H          DLVRGT+ LD
Sbjct:  124 YLVPELHRDQHFALRGNKPIAEFEEALALGITTRPVLLGPVSFLLLSKTVDGSNR----LDLLERLLPVYTQLLRQLQESGAEWVQIDEPTLVLDLDAQTQQAFRKAYAILNQGPRPKLLLTSYFGPLGDNLELALQLPADGLH---------IDLVRGTEQLD 274          
BLAST of EY664886 vs. ExPASy Swiss-Prot
Match: METE_XYLF2 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Xylella fastidiosa (strain M23) GN=metE PE=3 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 5.760e-17
Identity = 58/164 (35.37%), Postives = 81/164 (49.39%), Query Frame = 2
Query:    2 FIVPELGPDVKFSYASHKAVTEYKEAKGLGVETVPVLIGPVSYLLLSKPAKGVAKTFXXXXXXXXXXXXXXEVISELKAAGASWIQFDEPLLVMDLDSHXIAAFSEAYAELESTLSGLMFLVR-------TTLLMFQLRHSXPHFFEGVTAYGFDLVRGTKPLD 472
            ++VPEL  D  F+   +K + E++EA  LG+ T PVL+GPVS+LLLSK   G  +                +++ +L+ +GA W+Q DEP LV+DLD+    AF +AYA L       + L            L  QL     H          DLVRGT+ LD
Sbjct:  124 YLVPELHRDQHFALRGNKPIAEFEEALALGITTRPVLLGPVSFLLLSKTVDGSNR----LDLLERLLPVYTQLLRQLQESGAEWVQIDEPTLVLDLDAQTQQAFRKAYAILNQGPRPKLLLTSYFGPLGDNLELALQLPADGLH---------IDLVRGTEQLD 274          
BLAST of EY664886 vs. ExPASy Swiss-Prot
Match: METE_SCHPO (Probable 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Schizosaccharomyces pombe GN=SPAC9.09 PE=1 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 1.676e-16
Identity = 57/159 (35.85%), Postives = 83/159 (52.20%), Query Frame = 2
Query:    2 FIVPELGPDVKFSYASHKAVTEYKEAKGLGVETVPVLIGPVSYLLLSKPAKGVAKTFXXXXXXXXXXXXXXEVISELKAAGASWIQFDEPLLVMDLDSHXIAAFSEAYAELESTLSGLMFLVRTTLLMFQLRHSXPHFFEGVTAYG--FDLVRGTKPLD 472
            F+ PE+  +  F  +S KA+ E+ EAK  G+ T PVL+GPV+YL ++K AKG   +               E+I +L  AGA +IQ DEP+L +DL    +A++ EAY     TL  +  L+ TT   F    S     +G+   G   D+VR  + LD
Sbjct:  129 FLRPEVSEETDFKLSSTKALDEFLEAKEAGIITRPVLVGPVTYLFIAKAAKG--SSIKPIELLPKLLPVYVELIKKLTEAGAEYIQIDEPILTLDLPQEILASYKEAY----ETLGKIGKLILTT--YFGSLQSNADVLKGLPIAGVHVDVVRAPENLD 279          
BLAST of EY664886 vs. ExPASy Swiss-Prot
Match: METE_PARL1 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) GN=metE PE=3 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 2.189e-16
Identity = 48/124 (38.71%), Postives = 62/124 (50.00%), Query Frame = 2
Query:    2 FIVPELGPDVKFSYASHKAVTEYKEAKGLGVETVPVLIGPVSYLLLSKPAKGVAKTFXXXXXXXXXXXXXXEVISELKAAGASWIQFDEPLLVMDLDSHXIAAFSEAYAELESTLSGLMFLVRT 373
            +IVPE  P+  F  A  KA+ E+ EAK LGV T PVL+GP S+L   K  K     F               V+  L  AGA W+Q DEP LV++L S  +A    AY+ L +    L  +V T
Sbjct:  122 YIVPEFSPETNFRLAFTKAIDEFAEAKALGVHTRPVLVGPFSFL---KLGKATVAGFDPLDLMGRLLPVYENVLKRLAEAGADWVQIDEPCLVLELGSGDLAKCRAAYSALSAAAPSLKLMVAT 242          
BLAST of EY664886 vs. ExPASy Swiss-Prot
Match: METE_CHRVO (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Chromobacterium violaceum GN=metE PE=3 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 2.420e-15
Identity = 45/111 (40.54%), Postives = 65/111 (58.56%), Query Frame = 2
Query:    2 FIVPELGPDVKFSYASHKAVTEYKEAKGLGVETVPVLIGPVSYLLLSKPAKGVAKTFXXXXXXXXXXXXXXEVISELKAAGASWIQFDEPLLVMDLDSHXIAAFSEAYAEL 334
            ++VPE   D  FS    + +++ +EA+ LGV   PVL+GP+S L L K AKG  + F              E++S L+AAGA W Q DEP+L +DL+   + AF+ AYA+L
Sbjct:  121 YLVPEWHADTAFSAQPERLLSQLREARALGVAAKPVLLGPLSLLWLGK-AKG--RPFDRLALLPGLVAAYRELLSSLRAAGAEWAQIDEPILALDLEPSWLDAFAPAYAQL 228          
BLAST of EY664886 vs. ExPASy Swiss-Prot
Match: METE_NITWN (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) GN=metE PE=3 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 3.161e-15
Identity = 46/124 (37.10%), Postives = 62/124 (50.00%), Query Frame = 2
Query:    2 FIVPELGPDVKFSYASHKAVTEYKEAKGLGVETVPVLIGPVSYLLLSKPAKGVAKTFXXXXXXXXXXXXXXEVISELKAAGASWIQFDEPLLVMDLDSHXIAAFSEAYAELESTLSGLMFLVRT 373
            ++VPE     +F  +S KA+ EY+EAK LG +T PVL+GPV+YL L K                       +V+  L A GA W+Q DEP LV+DLD         AY +L   L  L  ++ T
Sbjct:  136 YMVPEFTSGQRFQLSSLKAIDEYREAKALGYQTRPVLLGPVTYLKLGKSKDA---NLDPLSLLPDLLPVYIDVLKRLAAEGAEWVQIDEPCLVLDLDDATRKVLRAAYEQLADALPKLKVMLTT 256          
BLAST of EY664886 vs. ExPASy Swiss-Prot
Match: METE_CAUCR (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Caulobacter crescentus GN=metE PE=3 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 3.161e-15
Identity = 47/122 (38.52%), Postives = 62/122 (50.82%), Query Frame = 2
Query:    2 FIVPELGPDVKFSYASHKAVTEYKEAKGLGVETVPVLIGPVSYLLLSKPAKGVAKTFXXXXXXXXXXXXXXEVISELKAAGASWIQFDEPLLVMDLDSHXIAAFSEAYAELESTLSGLMFLV 367
            ++ PEL P   F+  S K V E+ EAK LGV T PVL+GPV++L   K AK  A+ F              +V+  L AAGA W+Q DEP L +DL     A    AY  L     G+  ++
Sbjct:  140 YLAPELSPGQAFALTSSKPVDEFLEAKALGVHTRPVLLGPVTFL---KLAKTKAEGFSPLSLLSALLPVYGQVLRGLAAAGADWVQIDEPCLALDLTDFERAELRRAYGALTHAAPGVRLML 258          
BLAST of EY664886 vs. ExPASy Swiss-Prot
Match: METE_RHILO (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Rhizobium loti GN=metE PE=3 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 4.128e-15
Identity = 49/123 (39.84%), Postives = 65/123 (52.85%), Query Frame = 2
Query:    2 FIVPELGPDVKFSYASHKAVTEYKEAKGLGVETVPVLIGPVSYLLLSK-PAKGVAKTFXXXXXXXXXXXXXXEVISELKAAGASWIQFDEPLLVMDLDSHXIAAFSEAYAELESTLSGLMFLV 367
            +IVPEL  D  F+ +S K V  + EAK LG+ T PVL+GPV++L L+K P +G    F              E++  LK AGA W+Q DEP LV+DL  +   A   AY  L      L  +V
Sbjct:  135 YIVPELTDDQSFALSSAKPVDHFLEAKALGIHTRPVLLGPVTFLKLAKSPEEG----FNPIALLPRLLPVYEELLRRLKLAGADWVQIDEPALVVDLVPNERDALQFAYCRLSKAAPELKIMV 253          
BLAST of EY664886 vs. ExPASy Swiss-Prot
Match: METE_SALRD (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Salinibacter ruber (strain DSM 13855) GN=metE PE=3 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 5.392e-15
Identity = 48/111 (43.24%), Postives = 59/111 (53.15%), Query Frame = 2
Query:    2 FIVPELGPDVKFSYASHKAVTEYKEAKGLGVETVPVLIGPVSYLLLSKPAKGVAKTFXXXXXXXXXXXXXXEVISELKAAGASWIQFDEPLLVMDLDSHXIAAFSEAYAEL 334
            +IVPE   D  FS +S K + EY+EAK  GV+T PV+IGPVS+LLL K     A                 EV+ EL  AG   +Q DEP LV+DL     AA  +AY  L
Sbjct:  129 YIVPEFSHDTTFSLSSTKVIDEYEEAKAQGVDTRPVVIGPVSFLLLGKTQ---ADDLDALDLLDDLLPVYAEVLQELADAGCEAVQLDEPNLVLDLSDAERAALDQAYEAL 236          
The following BLAST results are available for this feature:
BLAST of EY664886 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 102
Match NameE-valueIdentityDescription
METE_RHOPA3.377e-1739.525-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_XYLFT5.760e-1735.375-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_XYLF25.760e-1735.375-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_SCHPO1.676e-1635.85Probable 5-methyltetrahydropteroyltriglutamate--ho... [more]
METE_PARL12.189e-1638.715-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_CHRVO2.420e-1540.545-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_NITWN3.161e-1537.105-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_CAUCR3.161e-1538.525-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_RHILO4.128e-1539.845-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_SALRD5.392e-1543.245-methyltetrahydropteroyltriglutamate--homocystein... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C1-101-071-E12-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY664886 ID=EY664886; Name=EY664886; organism=Citrus sinensis; type=EST; length=528bp
TTTCATTGTTCCTGAATTGGGACCCGATGTTAAGTTCTCCTACGCTTCCC
ACAAGGCCGTGACTGAGTACAAGGAGGCTAAGGGGCTTGGAGTTGAAACT
GTCCCAGTGCTTATTGGCCCTGTGTCATACTTGTTGCTGTCTAAGCCTGC
CAAGGGTGTTGCGAAGACCTTTTCTCTTCTTTCTCTTCTTCCCAAAATCC
TTCCAATCTACAAGGAAGTTATTTCTGAGCTTAAGGCTGCTGGTGCTTCC
TGGATTCAGTTTGATGAGCCATTGCTTGTTATGGATCTTGACTCACACNA
AATTGCAGCATTCAGTGAGGCTTATGCCGAGCTAGAGTCAACTCTGTCTG
GCTTGATGTTCCTTGTGAGAACTACTTTGCTGATGTTCCAGCTGAGGCAT
TCCANACCTCACTTCTTTGAAGGTGTCACCGCTTATGGATTTGATTTGGT
TCGGGGAACCAAACCCCTTGATGATCAGAATGGATTCCTGCTGGCAGTAC
TCTTTGTTGGATGGTTGAGGGAGGAACT
back to top