EY664875
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY664875 vs. ExPASy Swiss-Prot
Match: CB22_ORYSJ (Chlorophyll a-b binding protein 2, chloroplastic OS=Oryza sativa subsp. japonica GN=CAB2R PE=2 SV=2) HSP 1 Score: 356.681 bits (914), Expect = 1.084e-97 Identity = 178/235 (75.74%), Postives = 191/235 (81.28%), Query Frame = 2 Query: 62 GRISMRKTGSKS--VSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADP*TFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAXAQIFIEGGLDYLGNPSLIHAHSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPLYPVGSFDPWGLADDPEALAELRVRESRMEGWLLSPWLVSSFRPLVTARGPLKNFAHHLAGPGNYNAGAYPTTLSP 760 GRI+MRK+ +K +SGSPWYG DRV YLGP SGEPPSYLTGEFPGDYGWDTAGLSADP TFAKNRELEVIH RWAMLGALGCVFPELLARNGVKFGEAVWFKA +QIF EGGLDYLGNPSLIHA SILAIWA QVVLMGAVEGYRIAGGPLGEV DPLYP GSFDP GLADDPEA AEL+V+E + + + +VT +GPL+N A HLA P N NA AY T P Sbjct: 25 GRITMRKSAAKPKPAASGSPWYGADRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWAVQVVLMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVP 259
BLAST of EY664875 vs. ExPASy Swiss-Prot
Match: CB21_ARATH (Chlorophyll a-b binding protein 165/180, chloroplastic OS=Arabidopsis thaliana GN=LHCP-A PE=1 SV=1) HSP 1 Score: 354.755 bits (909), Expect = 4.119e-97 Identity = 177/254 (69.69%), Postives = 200/254 (78.74%), Query Frame = 2 Query: 5 ASGGKTVNLAPSGNELSNGGRISMRKTGSKSVS-SGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADP*TFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAXAQIFIEGGLDYLGNPSLIHAHSILAIWACQVVLMGAVEGYRIAG-GPLGEVTDPLYPVGSFDPWGLADDPEALAELRVRESRMEGWLLSPWLVSSFRPLVTARGPLKNFAHHLAGPGNYNAGAYPTTLSP 760 A GK VNL+P+ +E+ GR++MRKT +K SGSPWYG DRVKYLGPFSGE PSYLTGEFPGDYGWDTAGLSADP TFA+NRELEVIH RWAMLGALGCVFPELLARNGVKFGEAVWFKA +QIF +GGLDYLGNPSL+HA SILAIWA QV+LMGAVEGYR+AG GPLGE D LYP GSFDP GLA DPEA AEL+V+E + + + +VT +GP++N A HLA P N NA A+ T P Sbjct: 12 AFAGKAVNLSPAASEVLGSGRVTMRKTVAKPKGPSGSPWYGSDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSDGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRVAGNGPLGEAEDLLYPGGSFDPLGLATDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLADHLADPVNNNAWAFATNFVP 265
BLAST of EY664875 vs. ExPASy Swiss-Prot
Match: CB22_ARATH (Chlorophyll a-b binding protein 2, chloroplastic OS=Arabidopsis thaliana GN=CAB2A PE=1 SV=1) HSP 1 Score: 352.443 bits (903), Expect = 2.044e-96 Identity = 176/254 (69.29%), Postives = 199/254 (78.35%), Query Frame = 2 Query: 5 ASGGKTVNLAPSGNELSNGGRISMRKTGSKSVS-SGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADP*TFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAXAQIFIEGGLDYLGNPSLIHAHSILAIWACQVVLMGAVEGYRIAG-GPLGEVTDPLYPVGSFDPWGLADDPEALAELRVRESRMEGWLLSPWLVSSFRPLVTARGPLKNFAHHLAGPGNYNAGAYPTTLSP 760 A GK V L+P+ +E+ GR++MRKT +K SGSPWYG DRVKYLGPFSGE PSYLTGEFPGDYGWDTAGLSADP TFA+NRELEVIH RWAMLGALGCVFPELLARNGVKFGEAVWFKA +QIF +GGLDYLGNPSL+HA SILAIWA QV+LMGAVEGYR+AG GPLGE D LYP GSFDP GLA DPEA AEL+V+E + + + +VT +GP++N A HLA P N NA A+ T P Sbjct: 12 AFAGKAVKLSPAASEVLGSGRVTMRKTVAKPKGPSGSPWYGSDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSDGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRVAGNGPLGEAEDLLYPGGSFDPLGLATDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLADHLADPVNNNAWAFATNFVP 265
BLAST of EY664875 vs. ExPASy Swiss-Prot
Match: CB22_SOYBN (Chlorophyll a-b binding protein 2, chloroplastic OS=Glycine max GN=CAB2 PE=3 SV=1) HSP 1 Score: 351.673 bits (901), Expect = 3.487e-96 Identity = 182/249 (73.09%), Postives = 197/249 (79.12%), Query Frame = 2 Query: 14 GKTVNLAPSGNELSNGGRISMRKTGSKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADP*TFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAXAQIFIEGGLDYLGNPSLIHAHSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPLYPVGSFDPWGLADDPEALAELRVRESRMEGWLLSPWLVSSFRPLVTARGPLKNFAHHLAGPGNYNAGAYPTTLSP 760 G+ + LAPS EL G R+SMRKT K+VSSGSPWYGPDRVKYLGPFSGE PSYLTGEF G LSADP TFAKNRELEVIH RWAMLGALGCVFPELLARNGVKFGEAVWFKA +QIF EGGLDYLGNPSLIHA SILAIWA QV+LMGAVEGYRIAGGPLGEVTDP+YP GSFDP GLADDPEALAEL+V+E + + + +VT +GPL+N A HLA P N NA AY T L P Sbjct: 15 GQAMKLAPSTPELGVG-RVSMRKTAPKTVSSGSPWYGPDRVKYLGPFSGEAPSYLTGEFHG--------LSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWATQVILMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPEALAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATKLCP 254
BLAST of EY664875 vs. ExPASy Swiss-Prot
Match: CB21_WHEAT (Chlorophyll a-b binding protein, chloroplastic OS=Triticum aestivum GN=WHAB1.6 PE=3 SV=1) HSP 1 Score: 349.747 bits (896), Expect = 1.325e-95 Identity = 174/251 (69.32%), Postives = 196/251 (78.09%), Query Frame = 2 Query: 14 GKTVNLAPSGNELSNGGRISMRKTGSKS--VSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADP*TFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAXAQIFIEGGLDYLGNPSLIHAHSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPLYPVGSFDPWGLADDPEALAELRVRESRMEGWLLSPWLVSSFRPLVTARGPLKNFAHHLAGPGNYNAGAYPTTLSP 760 GK V PS + L R++MRKT +K+ VSS SPWYG DRV YLGP SGEPPSYLTGEFPGDYGWDTAGLSADP TFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEA WFKA +QIF +GGLDYLGNPSL+HA S+LAIWACQVVLMGAVEGYRIAGGPLGE+ DPLYP GSFDP GLA+ P+A AEL+V+E + + + +VT +GPL++ A H+A P N NA T P Sbjct: 15 GKAVKNLPS-SALIGDARVNMRKTAAKAKQVSSSSPWYGSDRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAGWFKAGSQIFSDGGLDYLGNPSLVHAQSLLAIWACQVVLMGAVEGYRIAGGPLGEIVDPLYPGGSFDPLGLAERPQAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLEDLADHIADPVNNNAWLIATNFVP 264
BLAST of EY664875 vs. ExPASy Swiss-Prot
Match: CB21_PEA (Chlorophyll a-b binding protein AB96 (Fragment) OS=Pisum sativum GN=AB96 PE=1 SV=1) HSP 1 Score: 341.658 bits (875), Expect = 3.609e-93 Identity = 171/227 (75.33%), Postives = 185/227 (81.50%), Query Frame = 2 Query: 83 TGSKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADP*TFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAXAQIFIEGGLDYLGNPSLIHAHSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPLYPVGSFDPWGLADDPEALAELRVRESRMEGWLLSPWLVSSFRP-LVTARGPLKNFAHHLAGPGNYNAGAYPTTLSP 760 T K SS SPW+GPD VKYLGPFSGE PSYLTGEFPGDYGWDTAGLSADP TFAKNRELEVIH RWAMLGALGCVFPELL+RNGVKFGEAVWFKA +QIF EGGLDYLGNPSL+HA SILAIWA QV+LMGAVEGYRIAGGPLGEV DPLYP GSFDP GLA+ PEA AEL+V+E + G L + F P +VT +GPL+N A HLA P N NA +Y T P Sbjct: 1 TTKKVASSSSPWHGPDGVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLAEVPEAFAELKVKELK-NGRLAMFSMFGFFVPAIVTGKGPLENLADHLADPVNNNAWSYATNFVP 226
BLAST of EY664875 vs. ExPASy Swiss-Prot
Match: CB23_POLMU (Chlorophyll a-b binding protein type 1 member F3, chloroplastic OS=Polystichum munitum GN=CABF3 PE=3 SV=1) HSP 1 Score: 336.65 bits (862), Expect = 1.161e-91 Identity = 168/244 (68.85%), Postives = 188/244 (77.05%), Query Frame = 2 Query: 44 NELSNG-----GRISMRKTGSKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADP*TFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAXAQIFIEGGLDYLGNPSLIHAHSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPLYPVGSFDPWGLADDPEALAELRVRESRMEGWLLSPWLVSSFRPLVTARGPLKNFAHHLAGPGNYNAGAYPTTLSP 760 NELS R+ M SK+ SGS WYG DR YLGPFSG PPSYL+GEFPGDYGWDTAGLSADP TFAKNRELEVIH RWAMLGALGCV PELLA+NGVKFGEAVWFKA +QIF EGGLDYLGNPSL+HA SILAIWACQV+LMGAVEGYR+AGGPLGEV DP+YP GSFDP GLADDPEA AEL+V+E + + + +VT +GP++N + HLA P NA AY T +P Sbjct: 21 NELSRKVGAGEARVQMMAPKSKA-PSGSIWYGSDRPLYLGPFSGSPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTPELLAKNGVKFGEAVWFKAGSQIFAEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLSDHLADPAVNNAWAYATNFTP 263
BLAST of EY664875 vs. ExPASy Swiss-Prot
Match: CB2_PHYPA (Chlorophyll a-b binding protein, chloroplastic OS=Physcomitrella patens PE=3 SV=1) HSP 1 Score: 333.954 bits (855), Expect = 7.525e-91 Identity = 168/259 (64.86%), Postives = 193/259 (74.52%), Query Frame = 2 Query: 2 HASGGKTVNLAPSGNELSNG------GRISMRKTGSKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADP*TFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAXAQIFIEGGLDYLGNPSLIHAHSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPLYPVGSFDPWGLADDPEALAELRVRESRMEGWLLSPWLVSSFRPLVTARGPLKNFAHHLAGPGNYNAGAYPTTLSP 760 H++ +L NELS R++MR+T SKS S + WYG DR K+LGPFSGE PSYL GEF GDYGWDTAGLS+DP TFA+NRELEVIH RWAMLGALGC+ PELLA++GVKFGEAVWFKA AQIF EGGLDYLGNPSL+HA SILAIWACQVVLMGAVEGYR+AGGPLGEVTDP+YP GSFDP GLADDP+ AEL+V+E + + + +VT +GPL+N HLA P NA AY T P Sbjct: 8 HSTALAGQSLVKPVNELSRKVLGNVEARVTMRRTVSKSAGSDTIWYGADRPKFLGPFSGETPSYLNGEFAGDYGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCLTPELLAKSGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEVTDPIYPGGSFDPLGLADDPDTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLNDHLADPVANNAWAYAPTSPP 266
BLAST of EY664875 vs. ExPASy Swiss-Prot
Match: CB21_GOSHI (Chlorophyll a-b binding protein 151, chloroplastic OS=Gossypium hirsutum GN=CAB-151 PE=2 SV=2) HSP 1 Score: 333.954 bits (855), Expect = 7.525e-91 Identity = 162/234 (69.23%), Postives = 185/234 (79.06%), Query Frame = 2 Query: 59 GGRISMRKTGSKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADP*TFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAXAQIFIEGGLDYLGNPSLIHAHSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPLYPVGSFDPWGLADDPEALAELRVRESRMEGWLLSPWLVSSFRPLVTARGPLKNFAHHLAGPGNYNAGAYPTTLSP 760 GGR+SMR+T + +S WYGPDR KYLGPFS + PSYLTGEFPGDYGWDTAGLSADP TFAKNRELEVIHCRWAMLGALGCVFPE+L++NGVKFGEAVWFKA +QIF EGGLDYLGNP+LIHA SILAIWACQVVLMG VEGYR+ GGPLGE DP+YP G+FDP GLADDP+A AEL+V+E + + + +VT +GP++N HLA P NA AY T P Sbjct: 32 GGRVSMRRTVKSAPTS--IWYGPDRPKYLGPFSDQIPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRVGGGPLGEGLDPIYPGGAFDPLGLADDPDAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLFDHLADPVANNAWAYATNFVP 263
BLAST of EY664875 vs. ExPASy Swiss-Prot
Match: CB48_MAIZE (Chlorophyll a-b binding protein 48, chloroplastic OS=Zea mays GN=CAB48 PE=3 SV=1) HSP 1 Score: 328.561 bits (841), Expect = 3.161e-89 Identity = 162/235 (68.94%), Postives = 178/235 (75.74%), Query Frame = 2 Query: 62 GRISMRKTGSKS--VSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADP*TFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAXAQIFIEGGLDYLGNPSLIHAHSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPLYPVGSFDPWGLADDPEALAELRVRESRMEGWLLSPWLVSSFRPLVTARGPLKNFAHHLAGPGNYNAGAYPTTLSP 760 GRI+MRKT +K SGSPWYG DRV YLGP SG PPSYLTGEFPGDYGWDT GLSADP TFAKNRELEVIHCRWA+ LGCVFPELLARNGVKFGE VWFKA +QIF EGGL + GNPSL+HA SILAIWACQVVLMGAVEGY +AGG LGEV DPLY GSFDP GL DDPE AEL+V+E + + + +VT +GP++N A HL P N NA AY T P Sbjct: 28 GRITMRKTAAKPKPARSGSPWYGADRVLYLGPLSGSPPSYLTGEFPGDYGWDTEGLSADPETFAKNRELEVIHCRWAIAVGLGCVFPELLARNGVKFGEGVWFKAGSQIFSEGGLSHPGNPSLVHAQSILAIWACQVVLMGAVEGYHVAGGRLGEVVDPLYLGGSFDPLGLGDDPERFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLADHLTDPVNNNAWAYATNFVP 262 The following BLAST results are available for this feature:
BLAST of EY664875 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 76
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Sequences
The
following sequences are available for this feature:
EST sequence >EY664875 ID=EY664875; Name=EY664875; organism=Citrus sinensis; type=EST; length=917bpback to top |