EY664875
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY664875 vs. ExPASy Swiss-Prot
Match: CB21_SILPR (Chlorophyll a-b binding protein, chloroplastic (Fragment) OS=Silene pratensis PE=2 SV=2) HSP 1 Score: 305.064 bits (780), Expect = 3.743e-82 Identity = 145/177 (81.92%), Postives = 156/177 (88.14%), Query Frame = 2 Query: 56 NGGRISMRKTGSKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADP*TFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAXAQIFIEGGLDYLGNPSLIHAHSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPLYPVGSFDPWGLADDPEA 586 NGGR+SMR+T + S WYGPDR KYLGPFS + PSYLTGEFPGDYGWDTAGLSADP TFAKNRELEVIHCRWAMLGALGCVFPELLA+NGVKFGEAVWFKA +QIF EGGLDYLGNP+L+HA SILAIWACQVVLMGAVEGYR+ GGPLGE D LYP G+FDP GLA+DPEA Sbjct: 30 NGGRVSMRRTIKSAPES--IWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAKNGVKFGEAVWFKAGSQIFQEGGLDYLGNPNLVHAQSILAIWACQVVLMGAVEGYRVGGGPLGEGLDQLYPGGAFDPLGLAEDPEA 204
BLAST of EY664875 vs. ExPASy Swiss-Prot
Match: CB2_CHLRE (Chlorophyll a-b binding protein of LHCII type I, chloroplastic OS=Chlamydomonas reinhardtii GN=cabII-1 PE=3 SV=1) HSP 1 Score: 281.182 bits (718), Expect = 5.788e-75 Identity = 144/233 (61.80%), Postives = 174/233 (74.68%), Query Frame = 2 Query: 77 RKTGSKSV---SSGSPWYGPDRVKYLGPFS-GEPPSYLTGEFPGDYGWDTAGLSADP*TFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAXAQIFIEGGLDYLGNPSLIHAHSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPLYPVGSFDPWGLADDPEALAELRVRESRMEGWLLSPWLVSSF-RPLVTARGPLKNFAHHLAGPGNYNAGAYPTTLSP 760 +KT +K+ SSG +YGP+R K+LGP+S P+YLTGEFPGDYGWDTAGLSADP TF + RELE+IH RWAMLGALGC PELLA++G KFGEAVWFKA AQIF EGGLDYLGNPSL+HA +I+A A QV+LMG +EGYR+ GGP GE DPLYP SFDP GLADDP+ AEL+V+E + G L S + F + +VT +GP++N HLA P NA A+ T +P Sbjct: 20 KKTAAKAAAPKSSGVEFYGPNRAKWLGPYSENATPAYLTGEFPGDYGWDTAGLSADPETFKRYRELELIHARWAMLGALGCQTPELLAKSGTKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQNIVATSAVQVILMGLIEGYRVNGGPAGEGLDPLYPGESFDPLGLADDPDTFAELKVKEIK-NGRLASFSMFGFFVQAIVTGKGPVQNLDDHLANPTVNNAFAFATKFTP 251
BLAST of EY664875 vs. ExPASy Swiss-Prot
Match: CB2_CHLMO (Chlorophyll a-b binding protein of LHCII type I, chloroplastic OS=Chlamydomonas moewusii PE=2 SV=1) HSP 1 Score: 280.411 bits (716), Expect = 9.873e-75 Identity = 140/221 (63.35%), Postives = 163/221 (73.76%), Query Frame = 2 Query: 101 SSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADP*TFAKNRELEVIHCRWAMLGALGCVFPELLARN-GVKFGEAVWFKAXAQIFIEGGLDYLGNPSLIHAHSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPLYPVGSFDPWGLADDPEALAELRVRESRMEGWLLSPWLVSSFRPLVTARGPLKNFAHHLAGPGNYNAGAYPTTLSP 760 S+G WYGPDR K+LGPFS P+YLTGEFPGDYGWDTAGLSADP TF K RELEVIH RWA+LGALG + PELL+ GVKFGE VWFKA AQIF EGGLDYLG+P+LIHA +I+A A QVVLMG +EGYR+ GGP GE DPLYP SFDP GLADDP+ AEL+V+E + + + +VT +GP++N A HLA PG NA A T +P Sbjct: 34 SAGIEWYGPDRAKWLGPFSTNTPAYLTGEFPGDYGWDTAGLSADPETFKKYRELEVIHARWALLGALGILTPELLSTYAGVKFGEPVWFKAGAQIFSEGGLDYLGSPALIHAQNIVATLAVQVVLMGLIEGYRVNGGPAGEGLDPLYPGESFDPLGLADDPDTFAELKVKEIKNGRLAMFSCFGFFVQAIVTGKGPIQNLADHLADPGTNNAFAAATKFTP 254
BLAST of EY664875 vs. ExPASy Swiss-Prot
Match: CB2_MALDO (Chlorophyll a-b binding protein AB10, chloroplastic OS=Malus domestica PE=3 SV=1) HSP 1 Score: 271.166 bits (692), Expect = 5.990e-72 Identity = 151/248 (60.89%), Postives = 170/248 (68.55%), Query Frame = 2 Query: 17 KTVNLAPSGNELSNGGRISMRKTGSKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADP*TFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAXAQIFIEGGLDYLGNPSLIHAHSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPLYPVGSFDPWGLADDPEALAELRVRESRMEGWLLSPWLVSSFRPLVTARGPLKNFAHHLAGPGNYNAGAYPTTLSP 760 K L P + L +M K +KS S S RVKYLGPFSGE PSYLTGEFPGDYGWDTAGLSA P TFAKNRELEVIH R AM ALGC+FPELL+ G FGEAVWFKA AQIF EGGLDYLGNPSL+HA SILAIW +V+LMGAVEGYRIA GPLGEVTDPLYP GSFD GLA+D EA AEL+V+E + + + +V+ + L+N A HL N NA + T P Sbjct: 22 KPSKLNPISSTLIVTAGFTMLKHAAKSKVSSSTC--DRRVKYLGPFSGEWPSYLTGEFPGDYGWDTAGLSAYPETFAKNRELEVIHSRCAMSAALGCIFPELLSVMGQGFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWTTKVILMGAVEGYRIARGPLGEVTDPLYP-GSFDSLGLAEDTEAFAELKVKELKNGRLAMFSMFGFFVQAIVSRKDRLENLADHLGWTVNNNALSNVTNFVP 266
BLAST of EY664875 vs. ExPASy Swiss-Prot
Match: CB23_SOLLC (Chlorophyll a-b binding protein 13, chloroplastic OS=Solanum lycopersicum GN=CAB13 PE=1 SV=1) HSP 1 Score: 257.299 bits (656), Expect = 8.950e-68 Identity = 141/252 (55.95%), Postives = 166/252 (65.87%), Query Frame = 2 Query: 14 GKTVNLAPSGNELSNGGRISMRKTGSKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADP*TFAKNRELEVIHCRWAMLGALGCVFPELLAR-NGVKFGEAVWFKAXAQIFIEGGLDYLGNPSLIHAHSILAIWACQVVLMGAVEGYRIAGGP-LGEVTDPLYPVGS-FDPWGLADDPEALAELRVRESRMEGWLLSPWLVSSFRPLVTARGPLKNFAHHLAGPGNYNAGAYPTTLSP 760 G+T N P + ++ G ++ S WYGPDRVKYLGPFS + PSYL GEFPGDYGWDTAGLSADP FAKNR LEVIH RWAMLGALGC+FPE+L + V F E VWFKA +QIF +GGLDYLGNP+L+HA SILA+ QVVLMG VEG+RI G P +GE D LYP G FDP GLADDP AEL+V+E + + + +VT +GPL+N HL P NA Y T P Sbjct: 21 GQTKNANPLRDVVAMGS--------ARFTMSNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRWAMLGALGCIFPEVLEKWVKVDFKEPVWFKAGSQIFSDGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLPGVGEGND-LYPGGQYFDPLGLADDPTTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFVP 263
BLAST of EY664875 vs. ExPASy Swiss-Prot
Match: CB23_HORVU (Chlorophyll a-b binding protein of LHCII type III, chloroplastic OS=Hordeum vulgare GN=LHBC PE=2 SV=1) HSP 1 Score: 255.758 bits (652), Expect = 2.604e-67 Identity = 135/229 (58.95%), Postives = 158/229 (69.00%), Query Frame = 2 Query: 83 TGSKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADP*TFAKNRELEVIHCRWAMLGALGCVFPELLAR-NGVKFGEAVWFKAXAQIFIEGGLDYLGNPSLIHAHSILAIWACQVVLMGAVEGYRIAG-GPLGEVTDPLYPVGS-FDPWGLADDPEALAELRVRESRMEGWLLSPWLVSSFRPLVTARGPLKNFAHHLAGPGNYNAGAYPTTLSP 760 T + WYGPDRVKYLGPFS + PSYL GEFPGDYGWDTAGLSADP FA+NR LEVIH RWAMLGALGCVFPE+L + GV+F E VWFKA +QIF EGGLDYLGNP+L+HA SILA+ QV+LMG VEG+RI G +GE D LYP G FDP GLADDP AEL+V+E + + + +VT +GPL+N HL P NA + T +P Sbjct: 39 TNGRITMGNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFARNRALEVIHGRWAMLGALGCVFPEVLQKWVGVEFKEPVWFKAGSQIFSEGGLDYLGNPNLVHAQSILAVLGFQVLLMGLVEGFRINGLDGVGEGND-LYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLFDHLDDPVANNAWVFATKFAP 266
BLAST of EY664875 vs. ExPASy Swiss-Prot
Match: CB2_DUNTE (Chlorophyll a-b binding protein of LHCII type I, chloroplastic OS=Dunaliella tertiolecta PE=2 SV=1) HSP 1 Score: 244.202 bits (622), Expect = 7.841e-64 Identity = 129/221 (58.37%), Postives = 155/221 (70.14%), Query Frame = 2 Query: 116 WYGPDRVKYLGPFS-GEPPSYLTGEFPGDYGWDTAGLSADP*TFAKNRELEVIHCRWAMLGALGCVFPELLAR-NGVKFGEAVWFKAXAQIFIEGGLDYLGNPSLIHAHSILAIWACQVVLMGAVEGYRIAGGPLG--EVTDPLYPVGSFDPWGLADDPEALAELRVRESRMEGWLLSPWLVSSFRPLVTARGPLKNFAHHLAGPGNYNAGAYPTTLSPEV 766 +YGPDR K+LGPFS + P YLTGEFPGDYGWDTAGLSADP TFA+ RE+E+IH RWA+LGALG + PELL++ GV+FGE VWFKA AQIF +GGL+YLGN SLIHA SI+A A QVVLMG E YR GG G + D LYP G FDP GLADDP+ AEL+V+E + + L + +VT +GP++N HLA P A A T +P V Sbjct: 33 FYGPDRAKFLGPFSENDTPEYLTGEFPGDYGWDTAGLSADPQTFARYREIELIHARWALLGALGILTPELLSQYAGVQFGEPVWFKAGAQIFADGGLNYLGNESLIHAQSIIATLAVQVVLMGLAEAYRANGGSEGFLDDLDTLYPGGPFDPLGLADDPDTFAELKVKEIKNGRLAMFSCLGFFVQAIVTGKGPVQNLTDHLADPTVNKAFASATKFTPGV 253
BLAST of EY664875 vs. ExPASy Swiss-Prot
Match: CB2_DUNSA (Chlorophyll a-b binding protein of LHCII type I, chloroplastic OS=Dunaliella salina PE=2 SV=1) HSP 1 Score: 242.276 bits (617), Expect = 2.980e-63 Identity = 129/230 (56.09%), Postives = 157/230 (68.26%), Query Frame = 2 Query: 80 KTGSKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADP*TFAKNRELEVIHCRWAMLGALGCVFPELLA-RNGVKFGEA-VWFKAXAQIFIEGGLDYLGNPSLIHAHSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPLYPVGSFDPWGLADDPEALAELRVRESRMEGWLLSPWLVSSFRPLVTARGPLKNFAHHLAGPGNYNAGAYPTTLSPE 763 K SKS SS + +YGPD + P TGEFPGDYGWDTAGLSADP TF + RELE+IH R +LGALG V PELLA +G+KFG+A +WFKA A IF +GGL+YLGNPSLIHA +I+A A QVVLMG VEGYR+ GGP GE DPLYP +FDP GLADDP+ AEL+V+E + + L + +VT +GP++N HLA P NA AY T +P+ Sbjct: 45 KAVSKSSSSANQFYGPDATSGWD-LQHQHPRLPTGEFPGDYGWDTAGLSADPETFKRYRELELIHARCGLLGALGMVTPELLADEDGIKFGDAAIWFKAGAAIFQDGGLNYLGNPSLIHAQNIVATLAVQVVLMGLVEGYRVNGGPAGEGLDPLYPGEAFDPLGLADDPDTFAELKVKEIKNGRLAMFACLGFFVQAIVTGKGPIENLTDHLANPAENNAFAYATKFTPQ 273
BLAST of EY664875 vs. ExPASy Swiss-Prot
Match: CB22_PINSY (Chlorophyll a-b binding protein type 2 member 2 (Fragment) OS=Pinus sylvestris PE=2 SV=1) HSP 1 Score: 188.734 bits (478), Expect = 3.910e-47 Identity = 94/148 (63.51%), Postives = 108/148 (72.97%), Query Frame = 2 Query: 317 ELLARNGVKFGEAVWFKAXAQIFIEGGLDYLGNPSLIHAHSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPLYPVGSFDPWGLADDPEALAELRVRESRMEGWLLSPWLVSSFRPLVTARGPLKNFAHHLAGPGNYNAGAYPTTLSP 760 ELL +NGVKFGEAVWFKA AQIF EGGLDYLGNP+LIHA SILAIWACQVVLMG +EGYR+ GGPLGE DPLYP +FDP GLADDPEA AEL+V+E + + + +VT +GP++N HLA P NA AY T P Sbjct: 1 ELLVKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGLIEGYRVGGGPLGEGLDPLYPGDAFDPLGLADDPEAKAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHLADPVANNAWAYATNFVP 148
BLAST of EY664875 vs. ExPASy Swiss-Prot
Match: CB26_ARATH (Chlorophyll a-b binding protein CP26, chloroplastic OS=Arabidopsis thaliana GN=LHCB5 PE=2 SV=1) HSP 1 Score: 146.747 bits (369), Expect = 1.704e-34 Identity = 96/222 (43.24%), Postives = 120/222 (54.05%), Query Frame = 2 Query: 89 SKSVSSGSP----WYGPDRVKYLGPF---SGEPPSYLTGEFPGDYGWDTAGLSADP*TFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFG-EAVWFKAXAQIFIEGGLDYLGNPSLIHAHSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPLYPVGSFDPWGLADDPEALAELRVRESRMEGWLLSPWLVSSFRPLVTARGPLKNFAHHLAGPGNYN 730 SK+VS S WYGPDR +L E P YL GE GDYG+D GL P FAK + E+IH RWAMLGA G + PE L + G G EAVWFK A + L+Y G I + +LA+ A +VVL+G E YRI G + D L+P G FDP GLA DPE A L+V+E + + L + VT GP++N A HL+ P N Sbjct: 49 SKAVSETSDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEVAGDYGYDPFGLGKKPENFAKYQAFELIHARWAMLGAAGFIIPEALNKYGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINLVLAVVA-EVVLLGGAEYYRITNGL--DFEDKLHPGGPFDPLGLAKDPEQGALLKVKEIKNGRLAMFAMLGFFIQAYVTGEGPVENLAKHLSDPFGNN 265 The following BLAST results are available for this feature:
BLAST of EY664875 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 76
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >EY664875 ID=EY664875; Name=EY664875; organism=Citrus sinensis; type=EST; length=917bpback to top |