EY664875
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY664875 vs. ExPASy Swiss-Prot
Match: CB2D_SOLLC (Chlorophyll a-b binding protein 1D (Fragment) OS=Solanum lycopersicum GN=CAB1D PE=3 SV=1) HSP 1 Score: 143.28 bits (360), Expect = 1.884e-33 Identity = 72/114 (63.16%), Postives = 83/114 (72.81%), Query Frame = 2 Query: 419 SLIHAHSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPLYPVGSFDPWGLADDPEALAELRVRESRMEGWLLSPWLVSSFRPLVTARGPLKNFAHHLAGPGNYNAGAYPTTLSP 760 SL+HA SILAIWACQVVLMGAVEGYRIAGGPLGEV DPLYP GSFDP GLA+DPEA AEL+V+E + + + +VT +GPL+N A HLA P N NA +Y T P Sbjct: 1 SLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWSYATNFVP 114
BLAST of EY664875 vs. ExPASy Swiss-Prot
Match: CB2C_SOLLC (Chlorophyll a-b binding protein 1C, chloroplastic (Fragments) OS=Solanum lycopersicum GN=CAB1C PE=3 SV=1) HSP 1 Score: 142.895 bits (359), Expect = 2.460e-33 Identity = 72/114 (63.16%), Postives = 83/114 (72.81%), Query Frame = 2 Query: 419 SLIHAHSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPLYPVGSFDPWGLADDPEALAELRVRESRMEGWLLSPWLVSSFRPLVTARGPLKNFAHHLAGPGNYNAGAYPTTLSP 760 SL+HA SILAIWACQVVLMGAVEGYRIAGGPLGEV DPLYP GSFDP GLA+DPEA AEL+V+E + + + +VT +GPL+N A HLA P N NA A+ T P Sbjct: 150 SLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAFATNFVP 263
BLAST of EY664875 vs. ExPASy Swiss-Prot
Match: CB2A_SOLLC (Chlorophyll a-b binding protein 1A, chloroplastic (Fragments) OS=Solanum lycopersicum GN=CAB1A PE=3 SV=1) HSP 1 Score: 142.895 bits (359), Expect = 2.460e-33 Identity = 72/114 (63.16%), Postives = 83/114 (72.81%), Query Frame = 2 Query: 419 SLIHAHSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPLYPVGSFDPWGLADDPEALAELRVRESRMEGWLLSPWLVSSFRPLVTARGPLKNFAHHLAGPGNYNAGAYPTTLSP 760 SL+HA SILAIWACQVVLMGAVEGYRIAGGPLGEV DPLYP GSFDP GLA+DPEA AEL+V+E + + + +VT +GPL+N A HLA P N NA A+ T P Sbjct: 150 SLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAFATNFVP 263
BLAST of EY664875 vs. ExPASy Swiss-Prot
Match: CB2F_SOLLC (Chlorophyll a-b binding protein 3B, chloroplastic (Fragments) OS=Solanum lycopersicum GN=CAB3B PE=3 SV=1) HSP 1 Score: 142.124 bits (357), Expect = 4.196e-33 Identity = 71/114 (62.28%), Postives = 83/114 (72.81%), Query Frame = 2 Query: 419 SLIHAHSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPLYPVGSFDPWGLADDPEALAELRVRESRMEGWLLSPWLVSSFRPLVTARGPLKNFAHHLAGPGNYNAGAYPTTLSP 760 SL+HA SILAIWACQVVLMGAVEGYRIAGGPLGEV DPLYP GSFDP GLA+DPEA AEL+V+E + + + +VT +GPL+N A H+A P N NA A+ T P Sbjct: 152 SLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHIADPVNNNAWAFATNFVP 265
BLAST of EY664875 vs. ExPASy Swiss-Prot
Match: CB2E_SOLLC (Chlorophyll a-b binding protein 3A, chloroplastic (Fragments) OS=Solanum lycopersicum GN=CAB3A PE=3 SV=1) HSP 1 Score: 142.124 bits (357), Expect = 4.196e-33 Identity = 71/114 (62.28%), Postives = 83/114 (72.81%), Query Frame = 2 Query: 419 SLIHAHSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPLYPVGSFDPWGLADDPEALAELRVRESRMEGWLLSPWLVSSFRPLVTARGPLKNFAHHLAGPGNYNAGAYPTTLSP 760 SL+HA SILAIWACQVVLMGAVEGYRIAGGPLGEV DPLYP GSFDP GLA+DPEA AEL+V+E + + + +VT +GPL+N A H+A P N NA A+ T P Sbjct: 152 SLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHIADPVNNNAWAFATNFVP 265
BLAST of EY664875 vs. ExPASy Swiss-Prot
Match: CB21_RAPSA (Chlorophyll a-b binding of LHCII type 1 protein (Fragment) OS=Raphanus sativus PE=2 SV=1) HSP 1 Score: 135.576 bits (340), Expect = 3.928e-31 Identity = 71/122 (58.20%), Postives = 83/122 (68.03%), Query Frame = 2 Query: 398 LDYLGNPSLIHAHSILAIWACQVVLMGAVEGYRIAG-GPLGEVTDPLYPVGSFDPWGLADDPEALAELRVRESRMEGWLLSPWLVSSFRPLVTARGPLKNFAHHLAGPGNYNAGAYPTTLSP 760 LDYLGNPSL+HA SILAIWA QV+LMGAVEGYR+AG GPLGE D LYP GSFDP DPEA AEL+V+E + + + +VT +GPL+N A HLA P N NA A+ T P Sbjct: 1 LDYLGNPSLVHAQSILAIWATQVILMGAVEGYRVAGDGPLGEAEDLLYPGGSFDPLASLTDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAFATNFVP 122
BLAST of EY664875 vs. ExPASy Swiss-Prot
Match: CB12_SOLLC (Chlorophyll a-b binding protein 7, chloroplastic OS=Solanum lycopersicum GN=CAB7 PE=3 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 3.119e-20 Identity = 70/209 (33.49%), Postives = 101/209 (48.33%), Query Frame = 2 Query: 125 PDRVKYLGPFSGE-PPSYLTGEFPGDYGWDTAGLSADP*TFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAXAQIFIEGGLDYLGNPSLIHAHSILAIWA-----CQVVLMGAVEGYRIAGGPLGEVTDPLYPVGS-FDP--WGLADDPEALAELRVRESRMEGWLLSPWLVSSFRPLVTARGPLKNFAHHLAGPGN 724 PDR + F G PP +L G PGD+G+D GL++DP + N++ E++HCRWAMLGA G PELL + G+ W+ A Q + + +L +L WA ++ G V I TD YP G FDP WG + P + ELR +E + + + + F+ + T GP+ N HLA PG+ Sbjct: 63 PDRPLW---FPGSTPPPWLDGSLPGDFGFDPLGLASDPESLRWNQQAELVHCRWAMLGAAGIFIPELLTKIGI-LNTPSWYTAGEQEY------FTDTTTLFIVELVLIGWAEGRRWADIIKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWG-SGSPAKIKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGH 260
BLAST of EY664875 vs. ExPASy Swiss-Prot
Match: CB11_SOLLC (Chlorophyll a-b binding protein 6A, chloroplastic OS=Solanum lycopersicum GN=CAB6A PE=2 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 4.074e-20 Identity = 73/198 (36.87%), Postives = 97/198 (48.99%), Query Frame = 2 Query: 158 GEP-PSYLTGEFPGDYGWDTAGLSADP*TFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAXAQIFIEGG-LDYLGNPSLIHAHSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPLYPVGSFDPWGLADDPEALAELRVRE---SRMEGWLLSPWLVSSFRPLVTARGPLKNFAHHLAGPGNYNAG 736 G+P PSYL G PGD+G+D+ GL P + +E E+IHCRWAML G + PE L G W KA I GG YLG P + ++ I A + + + VE R + YP G+FDP G + DP EL+V+E R+ + + V L T GPL+N A HLA P + N G Sbjct: 52 GQPRPSYLDGSAPGDFGFDSLGLGEVPANLERYKESELIHCRWAMLAVPGIIVPEAL-------GLGNWVKAQEWAAIPGGQATYLGQP--VPWGTLPTILAIEFLAIAFVEHQR---SMEKDSEKKKYPGGAFDPLGYSKDPAKFEELKVKEIKNGRLALLAIVGFCVQQSAYLGT--GPLENLATHLADPWHNNIG 235
BLAST of EY664875 vs. ExPASy Swiss-Prot
Match: CB12_PETHY (Chlorophyll a-b binding protein, chloroplastic OS=Petunia hybrida PE=2 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 6.949e-20 Identity = 73/231 (31.60%), Postives = 106/231 (45.89%), Query Frame = 2 Query: 86 GSKSVSSGSPWYGPDRVKYLGPFSGE-PPSYLTGEFPGDYGWDTAGLSADP*TFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAXAQIFIEGGLDYLGNPSLIHAHSILAIWACQVVLMGAVEGYRIAG--GPLGEVTDPLYPVGS-------------FDP--WGLADDPEALAELRVRESRMEGWLLSPWLVSSFRPLVTARGPLKNFAHHLAGPGN 724 GS+SV+ + PDR + F G PP +L G PGD+G+D GL +DP + N + E++H RWAMLGA G PE L + GV W+ A Q + ++ ++VL+G EG R A P TDP++P FDP WG + P + ELR +E + + + + F+ + T GP+ N HLA PG+ Sbjct: 50 GSRSVAVSAVAADPDRPLW---FPGSTPPEWLDGSLPGDFGFDPLGLGSDPESLKWNAQAELVHSRWAMLGAAGIFIPEFLTKIGV-LNTPSWYTAGEQEYFT---------------DTTTLFVIELVLIGWAEGRRWADIIKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWG-SGSPAKIKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGH 260
BLAST of EY664875 vs. ExPASy Swiss-Prot
Match: CB21_EUGGR (Chlorophyll a-b binding protein of LHCII type 1 (Fragment) OS=Euglena gracilis PE=2 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 3.449e-19 Identity = 53/107 (49.53%), Postives = 68/107 (63.55%), Query Frame = 2 Query: 419 SLIHAHSILAIWACQVVLMGAVEGYRI---AGGPLGEVTDPLYPVGSFDPWGLADDPEALAELRVRESRMEGWLLSPWLVSSFRPLVTARGPLKNFAHHLAGPGNYN 730 +LIHA S+LAI A QV+LMGAVEGYR A G GE D LYP G FDP GLADDP+ EL+V+E + +S L + +VT GP++N+ +HL P +N Sbjct: 4 ALIHAKSLLAILATQVLLMGAVEGYRAGNTAPGQFGEDLDRLYPGGPFDPLGLADDPDTFPELKVKEIKNGRLAMSGMLGFYAQAIVTGEGPVENWLYHLQDPSAHN 110 The following BLAST results are available for this feature:
BLAST of EY664875 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 76
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Sequences
The
following sequences are available for this feature:
EST sequence >EY664875 ID=EY664875; Name=EY664875; organism=Citrus sinensis; type=EST; length=917bpback to top |