EY664875
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY664875 vs. ExPASy Swiss-Prot
Match: CB121_HORVU (Chlorophyll a-b binding protein 1B-21, chloroplastic OS=Hordeum vulgare GN=LHC Ib-21 PE=1 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 4.504e-19 Identity = 76/241 (31.54%), Postives = 109/241 (45.23%), Query Frame = 2 Query: 29 LAPSGNELSNGGRISMRKTGSKSVSSGSPWYGPDRVKYLGPFSGEP-PSYLTGEFPGDYGWDTAGLSADP*TFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAXAQIFI-EGGLDYLGNPSLIHAHSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPLYPVGSFDPWGLADDPEALAELRVRESRMEGWLLSPWLVSSF---RPLVTARGPLKNFAHHLAGPGNYNAG 736 LAPS +G T S V+ + W F G+P P++L G PGD+G+D GL+ P F + +E E+ HCRWAML G + PE L G W KA + +G YLGNP + ++ I A + + + E R + YP G+FDP G + DP EL+++E ++ L+ F + GPL+N A HLA P + N G Sbjct: 19 LAPSSRSGRSGLPFCAYATTSGRVTMSAEW-----------FPGQPRPAHLDGSSPGDFGFDPLGLATVPENFERFKESEIYHCRWAMLCVPGVLVPEAL-------GLGNWVKAQEWAALPDGQATYLGNP--VPWGNLPTILAIEFLAIAFAEQQRTME---KDPEKKKYPGGAFDPLGFSKDPAKFEELKLKE--IKNGRLAMLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIG 234
BLAST of EY664875 vs. ExPASy Swiss-Prot
Match: LH18_EUGGR (Light-harvesting complex I LH38 proteins (Fragment) OS=Euglena gracilis PE=2 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 7.442e-14 Identity = 64/191 (33.51%), Postives = 88/191 (46.07%), Query Frame = 2 Query: 155 SGEPPSYLTGEFPGDYGWDTAGLSADP*TFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAXAQIFIEGGLDYLGNPSLIHAHSILAIWACQVVLMGAVEGYRIAGG---PLGEVTDPLYPVGSFDPWGLADDPEALAELRVRESRMEGWLLSPWLVSSFRPLVTARGPLKNFAHHLAGP 718 + EPP+ LTGE+P D G+D L+ADP +A+ R EV H R AML +GC+ PELL G+ WF+A ++G L + + + E +R GG GE+ D YP FDP L D AE V+ R+ L+ + + L T PL N + HLA P Sbjct: 193 NAEPPALLTGEYPADRGFDPLNLAADPDVYARMRVAEVFHGRLAMLCTVGCIVPELL-------GKGAWFEAGDS--VDG----------------LKLGFITMAIAAPTEYWRGQGGFNWQKGEL-DRSYP--GFDPLNLTTDYTRAAE--VKNGRL---ALTAVAGLTAQYLATGESPLANLSAHLANP 350 HSP 2 Score: 76.6406 bits (187), Expect = 2.165e-13 Identity = 58/157 (36.94%), Postives = 76/157 (48.41%), Query Frame = 2 Query: 164 PPSYLTGEFPGDYGWDTAGLSADP*TFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAXAQIFIEGGLDYLGNPSLIHAHSILAIWACQVVLMGAVEGYRIAGGPL---GEVTDPLYPVGSFDPWGLADDPEALAELRVRESRMEG 625 PP YLTGE GD G+D AGL+ADP TF + + EV HCR +ML +GC+ PELL G WF+ ++ D+ + A+ A QVV +E +R GG L E D YP FDP L + AE++ M G Sbjct: 380 PPRYLTGEAYGDKGFDPAGLAADPVTFERMQVAEVFHCRLSMLALVGCLVPELL-------GNGAWFQIWDKV------DF----------NRFAVVALQVV--APLEYWRGNGGFLWNDEETVDQSYP--GFDPLNLTTEYTKEAEIKNGRLAMNG 509 HSP 3 Score: 68.9366 bits (167), Expect = 4.515e-11 Identity = 60/185 (32.43%), Postives = 83/185 (44.86%), Query Frame = 2 Query: 167 PSYLTGEFPGDYGWDTAGLSADP*TFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAXAQIFIEGGLDYLGNPSLIHAHSILAIWACQVVLMGAVEG-YRIAGGPLGEVTDPLYPVGSFDPWGLADDPEALAELRVRESRMEGWLLSPWLVSSFRPLVTARGPLKNFAHHLAGP 718 PS+L GE+ GD G+D AGL+ADP TF + R EV H R AML +G + P+ L G+ +W++A I GL +V + A G + +A G + E +DP FDP L D AE ++ R+ L+ L + V PL N A HL P Sbjct: 12 PSWLNGEYYGDRGFDPAGLAADPDTFERMRIAEVYHGRLAMLAVVGALVPDYL-------GKGIWYEAAQNAGI--GLK-------------------EVAIFTAAYGVFEVARG-VKENSDPTTIYPGFDPLNLTTDYTKEAE--IKNGRL---ALTALLGFEVQRHVVGGSPLANLAEHLQQP 162
BLAST of EY664875 vs. ExPASy Swiss-Prot
Match: CB4A_ARATH (Chlorophyll a-b binding protein CP29.1, chloroplastic OS=Arabidopsis thaliana GN=LHCB4.1 PE=1 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 4.824e-13 Identity = 74/259 (28.57%), Postives = 110/259 (42.47%), Query Frame = 2 Query: 77 RKTGSKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGL------------SADP*TFAKN--------------------------------RELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAXAQIFIEGGLDYLGNPSLIHAHSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPLYPVGSF-DPWGLADDPEALAELRVRESRMEGWLLSPWLVSSFRPLVTARGPLKNFAHHLAGP 718 +K+ K+V++ P + P + P +L G GDYG+D GL S D AKN RE E+IH RWAML LG + E L GV + +A ++ + G YLG P +++ I +V+++G +E R A + LYP G F DP GLA DPE A+L++ E + + +L + + T +GPL N+A HL+ P Sbjct: 44 KKSAKKTVTTDRPLWYPGAIS---------PDWLDGSLVGDYGFDPFGLGKPAEYLQFDIDSLDQ-NLAKNLAGDVIGTRTEAADAKSTPFQPYSEVFGIQRFRECELIHGRWAMLATLGALSVEWLT--GVTWQDA------GKVELVDGSSYLGQPLPFSISTLIWI---EVLVIGYIEFQRNAEL---DSEKRLYPGGKFFDPLGLAADPEKTAQLQLAEIKHARLAMVAFLGFAVQAAATGKGPLNNWATHLSDP 278
BLAST of EY664875 vs. ExPASy Swiss-Prot
Match: CB13_SOLLC (Chlorophyll a-b binding protein 8, chloroplastic OS=Solanum lycopersicum GN=CAB8 PE=3 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 4.824e-13 Identity = 76/251 (30.28%), Postives = 109/251 (43.43%), Query Frame = 2 Query: 59 GGRISMRKTGSKSV---SSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADP*T--FAKNREL---EVIHCRWAMLGALGCVFPELLARNGVKFGEA--VWFKAXAQIFIEGGLDYLGNPSLIHAHSILAIWACQVVLMGAVEGYRIAGGP----------------LGEVTDPLYPVGS-FDPWGLADDPEALAELRVRESRMEGWLLSPWLVSSFRPLVTARGPLKNFAHHLAGPGNYN 730 G RIS T S ++ +P + L S + SYL G PGD+G+D GLS T F + + L EVI+ R+AMLGA G + PE+L + G+ E WF+ I G +Y + ++ ++ LMG E R LG DP YP G F+P G D +++ EL+++E + + L + LVT GP +N HLA P N N Sbjct: 24 GSRISQSVTRKASFVVRAASTPPVKQGANRQLWFASKQSLSYLDGRLPGDFGFDPLGLSDPEGTGGFIEPKWLAYGEVINGRFAMLGAAGAIAPEILGKAGLIPQETALAWFQTGV-IPPAGTYNYWADN--------YTLFVLEMALMGFAEHRRFQDWAKPGSMGKQYFLGLEKGLGGSGDPAYPGGPLFNPLGFGKDEKSMKELKLKEIKNGRLAMLAILGYFIQALVTGVGPYQNLLDHLADPVNNN 265
BLAST of EY664875 vs. ExPASy Swiss-Prot
Match: CB23_PEA (Chlorophyll a-b binding protein 3, chloroplastic OS=Pisum sativum GN=lhca3 PE=1 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.833e-12 Identity = 68/211 (32.23%), Postives = 97/211 (45.97%), Query Frame = 2 Query: 170 SYLTGEFPGDYGWDTAGLSADP*T--FAKNREL---EVIHCRWAMLGALGCVFPELLARNGVKFGEA--VWFKAXAQIFIEGGLDYLGNPSLIHAHSILAIWACQVVLMGAVEGYRIAG----GPLGE------------VTDPLYPVGS-FDPWGLADDPEALAELRVRESRMEGWLLSPWLVSSFRPLVTARGPLKNFAHHLAGPGNYN 730 SYL G PGDYG+D GLS T F + R L EVI+ R+AMLGA+G + PE L + G+ E WF+ I G +Y + ++ ++ LMG E R G +G+ +P YP G F+P G D ++L EL+++E + + L + LVT GP +N H+A P N N Sbjct: 66 SYLDGSLPGDYGFDPLGLSDPEGTGGFIEPRWLAYGEVINGRFAMLGAVGAIAPEYLGKVGLIPQETALAWFQTGV-IPPAGTYNYWADN--------YTLFVLEMALMGFAEHRRFQDWAKPGSMGKQYFLGLEKGFGGSGNPAYPGGPFFNPLGFGKDEKSLKELKLKEVKNGRLAMLAILGYFIQGLVTGVGPYQNLLDHVADPVNNN 267
BLAST of EY664875 vs. ExPASy Swiss-Prot
Match: CB4B_ARATH (Chlorophyll a-b binding protein CP29.2, chloroplastic OS=Arabidopsis thaliana GN=LHCB4.2 PE=1 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 4.083e-12 Identity = 74/255 (29.02%), Postives = 106/255 (41.57%), Query Frame = 2 Query: 89 SKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGL------------SADP*TFAKN--------------------------------RELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAXAQIFIEGGLDYLGNPSLIHAHSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPLYPVGSF-DPWGLADDPEALAELRVRESRMEGWLLSPWLVSSFRPLVTARGPLKNFAHHLAGP 718 +K+V S P + P + P YL G GDYG+D GL S D AKN RE E+IH RWAML LG + E L GV + +A ++ + G YLG P +++ I +V+++G +E R A + LYP G F DP GLA DP A+L++ E + + +L + + T +GPL N+A HL+ P Sbjct: 45 AKTVISDRPLWFP---------GAKSPEYLDGSLVGDYGFDPFGLGKPAEYLQFDLDSLDQ-NLAKNLYGEVIGTRTEAVDPKSTPFQPYSEVFGLQRFRECELIHGRWAMLATLGAITVEWLT--GVTWQDA------GKVELVDGSSYLGQPLPFSISTLIWI---EVLVIGYIEFQRNAEL---DSEKRLYPGGKFFDPLGLASDPVKKAQLQLAEIKHARLAMVGFLGFAVQAAATGKGPLNNWATHLSDP 275 The following BLAST results are available for this feature:
BLAST of EY664875 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 76
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Sequences
The
following sequences are available for this feature:
EST sequence >EY664875 ID=EY664875; Name=EY664875; organism=Citrus sinensis; type=EST; length=917bpback to top |