EY664871

Overview
NameEY664871
Unique NameEY664871
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length852
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY664871 vs. ExPASy Swiss-Prot
Match: NIA2_PHAVU (Nitrate reductase [NADH] 2 OS=Phaseolus vulgaris GN=NIA2 PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 5.210e-11
Identity = 36/86 (41.86%), Postives = 53/86 (61.63%), Query Frame = 3 
Query:  426 KSTRSSANSNKASKIYSKDEVTLHNKRDDCWIIIKNKVYDVTSYVEEHPGG-DAILAHAGDDSTEGFYGPQHATRVFDMIDDFYIG 680
            K + S+   N ASK++S  EV  H+  D  WII+   VYD T ++++HPGG D+IL +AG D TE F    H+ +   M++D+ IG
Sbjct:  501 KKSVSTPFMNTASKMFSVSEVKKHSSPDSAWIIVHGHVYDCTRFLKDHPGGTDSILINAGTDCTEEF-DAIHSDKAKKMLEDYRIG 585
[Close]
BLAST of EY664871 vs. ExPASy Swiss-Prot
Match: NIA2_BRANA (Nitrate reductase [NADH], clone PBNBR1412 OS=Brassica napus GN=NIA2 PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 8.887e-11
Identity = 34/86 (39.53%), Postives = 53/86 (61.63%), Query Frame = 3 
Query:  426 KSTRSSANSNKASKIYSKDEVTLHNKRDDCWIIIKNKVYDVTSYVEEHPGG-DAILAHAGDDSTEGFYGPQHATRVFDMIDDFYIG 680
            K + SS   N ++K+YS  EV  HN  +  WII+   +YD T ++++HPGG D+IL +AG D TE F    H+ +   +++D+ IG
Sbjct:  527 KKSVSSPFMNTSAKMYSMSEVRKHNSVESAWIIVHGHIYDCTRFLKDHPGGSDSILINAGTDCTEEFEA-IHSDKAKKLLEDYRIG 611
The following BLAST results are available for this feature:
BLAST of EY664871 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 32
Match NameE-valueIdentityDescription
NIA2_PHAVU5.210e-1141.86Nitrate reductase [NADH] 2 OS=Phaseolus vulgaris G... [more]
NIA2_BRANA8.887e-1139.53Nitrate reductase [NADH], clone PBNBR1412 OS=Brass... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-071-D09-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY664871 ID=EY664871; Name=EY664871; organism=Citrus sinensis; type=EST; length=852bp
CTTCAGTATGGAGTCGATTAAGTCCACTATCACGCTTGAATATCTTGGCG
AATAAGTCCAGTAGTCGAATATAAGGTCGAGAAAGTGGAGTAAGTCAAGG
ACGAGGTTAAGGAGTTGAATACGAAGTCAAGTGCAAGATCGAGAAAGCCA
AGTAGCAGTAGATGTAGCGGCCTAGAACCAAGTGAAAACAAATAACACCG
CGGCTGTGCCGGAGAGGGAATACTAACAGAAGTAAAATCTATCCGGCAAA
TCCGATTCGAATCTCTCTACTTAATCTGATCCATTGCTGTTTTTATAATT
CACAGAGCACGTAGCAGCTGGGTAGTGGATTTTGAAAGATGGTTATAATC
GTGGCCGCATTAATTTTAGGTGCCATTTTGGGAGTCTTTATTTTCATCCC
ACGACACCCTGCATCTGGCCATTCAAAAAGTACTCGCTCAAGTGCTAACA
GTAACAAGGCATCAAAAATCTACAGCAAAGATGAAGTAACATTGCATAAT
AAGAGAGATGACTGTTGGATCATTATCAAGAACAAGGTGTATGATGTTAC
CTCATATGTAGAGGAACACCCAGGTGGCGATGCTATCCTAGCACATGCTG
GTGATGATTCAACTGAAGGATTTTATGGGCCACAGCATGCAACCCGAGTC
TTTGACATGATAGATGACTTTTACATTGGGGGATCTGAAGNNCATATCAC
TTGCAGCCAACGAGTTGTAAAATTAACAACAGACTCTGGACTTNCATGTT
TTATTCTTNCATTGGCTTTNNNTTGCCTAAACTTGACACCTTTTTGTGGC
CTTTACATTTTAAGAGAAATCTTTCCTTTTCTTTTAAAAAAAAAAAAAAA
AA
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