EY664869

Overview
NameEY664869
Unique NameEY664869
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length557
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1721 contig Csv1_Contig1721:282..841. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY664869 vs. ExPASy Swiss-Prot
Match: FER1_HYONI (Ferredoxin-1 OS=Hyoscyamus niger PE=1 SV=1)

HSP 1 Score: 135.961 bits (341), Expect = 1.224e-31
Identity = 61/81 (75.31%), Postives = 70/81 (86.42%), Query Frame = 2
Query:   17 NCPDDTFILDAAEEAGLDLPYSCRAGACSSCTGKVVSGTVDQSEQSFLDDDQMGEGFVLTCAAYPTSDVTIETHKEEELAG 259
            NCPDD +ILD AEE G +LPYSCRAG+CSSC GKV +GTVDQS+ +FLDDDQ+ +GFVLTC AYP SDVTIETHKEE+L G
Sbjct:   17 NCPDDVYILDQAEEEGHELPYSCRAGSCSSCAGKVSAGTVDQSDGNFLDDDQIADGFVLTCVAYPQSDVTIETHKEEDLTG 97          
BLAST of EY664869 vs. ExPASy Swiss-Prot
Match: FER_HORVU (Ferredoxin OS=Hordeum vulgare PE=1 SV=1)

HSP 1 Score: 135.576 bits (340), Expect = 1.598e-31
Identity = 62/77 (80.52%), Postives = 69/77 (89.61%), Query Frame = 2
Query:   23 PDDTFILDAAEEAGLDLPYSCRAGACSSCTGKVVSGTVDQSEQSFLDDDQMGEGFVLTCAAYPTSDVTIETHKEEEL 253
            PDD +ILD AEE G+DLPYSCRAG+CSSC GK+VSG +DQS+QSFLDDDQM EG+VLTCAAYP SDV IETHKEEEL
Sbjct:   19 PDDVYILDQAEEEGIDLPYSCRAGSCSSCAGKLVSGEIDQSDQSFLDDDQMEEGWVLTCAAYPKSDVVIETHKEEEL 95          
BLAST of EY664869 vs. ExPASy Swiss-Prot
Match: FER2_SPIOL (Ferredoxin-2 OS=Spinacia oleracea PE=1 SV=1)

HSP 1 Score: 135.576 bits (340), Expect = 1.598e-31
Identity = 63/78 (80.77%), Postives = 69/78 (88.46%), Query Frame = 2
Query:   20 CPDDTFILDAAEEAGLDLPYSCRAGACSSCTGKVVSGTVDQSEQSFLDDDQMGEGFVLTCAAYPTSDVTIETHKEEEL 253
            C DD +ILDAAEE G+DLPYSCRAGACSSC GKV SG+VDQS+QSFL+D QM EG+VLTC AYPT DVTIETHKEEEL
Sbjct:   18 CGDDEYILDAAEEKGMDLPYSCRAGACSSCAGKVTSGSVDQSDQSFLEDGQMEEGWVLTCIAYPTGDVTIETHKEEEL 95          
BLAST of EY664869 vs. ExPASy Swiss-Prot
Match: FER2_HYONI (Ferredoxin-2 OS=Hyoscyamus niger PE=1 SV=1)

HSP 1 Score: 135.576 bits (340), Expect = 1.598e-31
Identity = 61/81 (75.31%), Postives = 70/81 (86.42%), Query Frame = 2
Query:   17 NCPDDTFILDAAEEAGLDLPYSCRAGACSSCTGKVVSGTVDQSEQSFLDDDQMGEGFVLTCAAYPTSDVTIETHKEEELAG 259
            +CPDD +ILD AEE G +LPYSCRAG+CSSC GKV +GTVDQS+ +FLDDDQM +GFVLTC AYP SDVTIETHKEE+L G
Sbjct:   17 DCPDDVYILDQAEEEGHELPYSCRAGSCSSCAGKVKAGTVDQSDGNFLDDDQMADGFVLTCVAYPQSDVTIETHKEEDLTG 97          
BLAST of EY664869 vs. ExPASy Swiss-Prot
Match: FER_SPIMA (Ferredoxin OS=Spirulina maxima PE=1 SV=2)

HSP 1 Score: 135.191 bits (339), Expect = 2.087e-31
Identity = 60/79 (75.95%), Postives = 71/79 (89.87%), Query Frame = 2
Query:   17 NCPDDTFILDAAEEAGLDLPYSCRAGACSSCTGKVVSGTVDQSEQSFLDDDQMGEGFVLTCAAYPTSDVTIETHKEEEL 253
            +C DDT+ILDAAEEAGLDLPYSCRAGACS+C GK+ SG++DQS+QSFLDDDQ+  G+VLTC AYPTSD TI+TH+EE L
Sbjct:   20 DCDDDTYILDAAEEAGLDLPYSCRAGACSTCAGKITSGSIDQSDQSFLDDDQIEAGYVLTCVAYPTSDCTIQTHQEEGL 98          
BLAST of EY664869 vs. ExPASy Swiss-Prot
Match: FER1_SPIOL (Ferredoxin-1, chloroplastic OS=Spinacia oleracea GN=PETF PE=1 SV=2)

HSP 1 Score: 135.191 bits (339), Expect = 2.087e-31
Identity = 60/78 (76.92%), Postives = 71/78 (91.03%), Query Frame = 2
Query:   20 CPDDTFILDAAEEAGLDLPYSCRAGACSSCTGKVVSGTVDQSEQSFLDDDQMGEGFVLTCAAYPTSDVTIETHKEEEL 253
            CPDD +ILDAAEE G+DLPYSCRAG+CSSC GK+ +G+++Q +QSFLDDDQ+ EG+VLTCAAYP SDVTIETHKEEEL
Sbjct:   68 CPDDVYILDAAEEEGIDLPYSCRAGSCSSCAGKLKTGSLNQDDQSFLDDDQIDEGWVLTCAAYPVSDVTIETHKEEEL 145          
BLAST of EY664869 vs. ExPASy Swiss-Prot
Match: FER_TOBAC (Ferredoxin OS=Nicotiana tabacum PE=1 SV=1)

HSP 1 Score: 134.806 bits (338), Expect = 2.726e-31
Identity = 61/79 (77.22%), Postives = 68/79 (86.08%), Query Frame = 2
Query:   17 NCPDDTFILDAAEEAGLDLPYSCRAGACSSCTGKVVSGTVDQSEQSFLDDDQMGEGFVLTCAAYPTSDVTIETHKEEEL 253
            +CPDD +ILD AEE G DLPYSCRAG+CSSC GKV +G VDQS+ +FLDDDQM +GFVLTC AYP SDVTIETHKEEEL
Sbjct:   17 DCPDDVYILDQAEEMGHDLPYSCRAGSCSSCAGKVTAGNVDQSDGNFLDDDQMADGFVLTCVAYPQSDVTIETHKEEEL 95          
BLAST of EY664869 vs. ExPASy Swiss-Prot
Match: FER_PHYAF (Ferredoxin OS=Physalis alkekengi var. francheti PE=1 SV=1)

HSP 1 Score: 134.806 bits (338), Expect = 2.726e-31
Identity = 61/79 (77.22%), Postives = 70/79 (88.61%), Query Frame = 2
Query:   17 NCPDDTFILDAAEEAGLDLPYSCRAGACSSCTGKVVSGTVDQSEQSFLDDDQMGEGFVLTCAAYPTSDVTIETHKEEEL 253
            +CPD+ +ILDAAEE G DLPYSCRAG+CSSC GKV +GTVDQS+ +FLDDDQ+ +GFVLTC AYP SDVTIETHKEEEL
Sbjct:   17 DCPDNEYILDAAEEQGHDLPYSCRAGSCSSCAGKVTAGTVDQSDGNFLDDDQVADGFVLTCVAYPQSDVTIETHKEEEL 95          
BLAST of EY664869 vs. ExPASy Swiss-Prot
Match: FER_SCOJA (Ferredoxin OS=Scopolia japonica PE=1 SV=1)

HSP 1 Score: 134.42 bits (337), Expect = 3.561e-31
Identity = 61/81 (75.31%), Postives = 69/81 (85.19%), Query Frame = 2
Query:   17 NCPDDTFILDAAEEAGLDLPYSCRAGACSSCTGKVVSGTVDQSEQSFLDDDQMGEGFVLTCAAYPTSDVTIETHKEEELAG 259
            +CPDD +ILD AEE G +LPYSCRAG+CSSC GKV +GTVDQS+ +FLDDDQM +GFVLTC AYP SDV IETHKEEEL G
Sbjct:   17 DCPDDVYILDQAEEEGHELPYSCRAGSCSSCAGKVSAGTVDQSDGNFLDDDQMADGFVLTCVAYPQSDVIIETHKEEELTG 97          
BLAST of EY664869 vs. ExPASy Swiss-Prot
Match: FER_LEUGL (Ferredoxin OS=Leucaena glauca PE=1 SV=1)

HSP 1 Score: 134.42 bits (337), Expect = 3.561e-31
Identity = 60/80 (75.00%), Postives = 70/80 (87.50%), Query Frame = 2
Query:   20 CPDDTFILDAAEEAGLDLPYSCRAGACSSCTGKVVSGTVDQSEQSFLDDDQMGEGFVLTCAAYPTSDVTIETHKEEELAG 259
            CPDD +ILD AEE G++LPYSCRAG+CSSC GK+V G +DQS+QSFLDD+Q+ EG+VLTCAAYP SDV IETHKEEEL G
Sbjct:   17 CPDDVYILDQAEELGIELPYSCRAGSCSSCAGKLVEGDLDQSDQSFLDDEQIEEGWVLTCAAYPRSDVVIETHKEEELTG 96          
The following BLAST results are available for this feature:
BLAST of EY664869 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 110
Match NameE-valueIdentityDescription
FER1_HYONI1.224e-3175.31Ferredoxin-1 OS=Hyoscyamus niger PE=1 SV=1[more]
FER_HORVU1.598e-3180.52Ferredoxin OS=Hordeum vulgare PE=1 SV=1[more]
FER2_SPIOL1.598e-3180.77Ferredoxin-2 OS=Spinacia oleracea PE=1 SV=1[more]
FER2_HYONI1.598e-3175.31Ferredoxin-2 OS=Hyoscyamus niger PE=1 SV=1[more]
FER_SPIMA2.087e-3175.95Ferredoxin OS=Spirulina maxima PE=1 SV=2[more]
FER1_SPIOL2.087e-3176.92Ferredoxin-1, chloroplastic OS=Spinacia oleracea G... [more]
FER_TOBAC2.726e-3177.22Ferredoxin OS=Nicotiana tabacum PE=1 SV=1[more]
FER_PHYAF2.726e-3177.22Ferredoxin OS=Physalis alkekengi var. francheti PE... [more]
FER_SCOJA3.561e-3175.31Ferredoxin OS=Scopolia japonica PE=1 SV=1[more]
FER_LEUGL3.561e-3175.00Ferredoxin OS=Leucaena glauca PE=1 SV=1[more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-071-D07-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY664869 ID=EY664869; Name=EY664869; organism=Citrus sinensis; type=EST; length=557bp
CCACGCGTCCGGAAATAACTGTCCTGATGACACGTTTATTCTTGATGCTG
CTGAAGAAGCTGGGCTTGATCTTCCGTACTCATGCAGGGCTGGGGCTTGC
TCTTCCTGTACTGGGAAAGTTGTGTCTGGAACCGTTGACCAGTCGGAGCA
AAGCTTTCTGGATGATGATCAAATGGGAGAAGGTTTTGTTCTCACTTGTG
CTGCTTATCCAACAAGTGATGTTACTATAGAGACTCACAAGGAAGAGGAG
CTCGCTGGTTAATAATGTGCTCTTGATATCTCATTATTATCTTCTCTTTT
ATGTGTTGTGTTTTGTCTGATTATTTTAATGCTTTGAAAGGGATATTGAG
TAATTTGAGAATGATTCTTGTAATGTGTTTTTATTTCTTGTTGCAAAGAA
GTTGTAATTGCACCGGCCATGAATGCGCATCGTACCTAGAGGGTGAGGTT
TCTCATCCCATCCGAACATGGTACCGTTCTATAATTAAGAGTCAAGCAAG
AACAATGGATCTTTCGTTGTATTTCATCGGTAAAAAAAAAAAAAAAAAAA
AAAAAAA
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