EY664869

Overview
NameEY664869
Unique NameEY664869
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length557
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY664869 vs. ExPASy Swiss-Prot
Match: FER1_ANAVT (Ferredoxin-1 OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=petF1 PE=1 SV=2)

HSP 1 Score: 134.42 bits (337), Expect = 3.561e-31
Identity = 61/77 (79.22%), Postives = 70/77 (90.91%), Query Frame = 2
Query:   23 PDDTFILDAAEEAGLDLPYSCRAGACSSCTGKVVSGTVDQSEQSFLDDDQMGEGFVLTCAAYPTSDVTIETHKEEEL 253
            PDD +ILDAAEE G DLP+SCRAGACS+C GK+VSGTVDQS+QSFLDDDQ+  G+VLTC AYPTSDVTI+THKEE+L
Sbjct:   22 PDDEYILDAAEEQGYDLPFSCRAGACSTCAGKLVSGTVDQSDQSFLDDDQIEAGYVLTCVAYPTSDVTIQTHKEEDL 98          
BLAST of EY664869 vs. ExPASy Swiss-Prot
Match: FER_THAWE (Ferredoxin OS=Thalassiosira weissflogii GN=petF PE=3 SV=3)

HSP 1 Score: 134.035 bits (336), Expect = 4.650e-31
Identity = 60/79 (75.95%), Postives = 68/79 (86.08%), Query Frame = 2
Query:   17 NCPDDTFILDAAEEAGLDLPYSCRAGACSSCTGKVVSGTVDQSEQSFLDDDQMGEGFVLTCAAYPTSDVTIETHKEEEL 253
            +C DD F+LDAAEEAG+DLPYSCRAGACS+C GKV  GT+DQSEQ+FLDDDQMG GFVLTC AYP SD TI  H+E+EL
Sbjct:   20 DCNDDVFVLDAAEEAGIDLPYSCRAGACSTCAGKVTEGTIDQSEQTFLDDDQMGAGFVLTCIAYPKSDCTILVHQEDEL 98          
BLAST of EY664869 vs. ExPASy Swiss-Prot
Match: FER_SPIPL (Ferredoxin OS=Spirulina platensis PE=1 SV=2)

HSP 1 Score: 134.035 bits (336), Expect = 4.650e-31
Identity = 60/79 (75.95%), Postives = 70/79 (88.61%), Query Frame = 2
Query:   17 NCPDDTFILDAAEEAGLDLPYSCRAGACSSCTGKVVSGTVDQSEQSFLDDDQMGEGFVLTCAAYPTSDVTIETHKEEEL 253
            +C DDT+ILDAAEEAGLDLPYSCRAGACS+C G + SGT+DQS+QSFLDDDQ+  G+VLTC AYPTSD TI+TH+EE L
Sbjct:   20 DCDDDTYILDAAEEAGLDLPYSCRAGACSTCAGTITSGTIDQSDQSFLDDDQIEAGYVLTCVAYPTSDCTIKTHQEEGL 98          
BLAST of EY664869 vs. ExPASy Swiss-Prot
Match: FER_GUITH (Ferredoxin OS=Guillardia theta GN=petF PE=3 SV=3)

HSP 1 Score: 134.035 bits (336), Expect = 4.650e-31
Identity = 60/79 (75.95%), Postives = 70/79 (88.61%), Query Frame = 2
Query:   17 NCPDDTFILDAAEEAGLDLPYSCRAGACSSCTGKVVSGTVDQSEQSFLDDDQMGEGFVLTCAAYPTSDVTIETHKEEEL 253
            +CPDD +ILDAAEE G+DLPYSCRAGACS+C GKV +G+VDQS+QSFLDD Q+G+GFVLTC AYPTSD TI TH+EE L
Sbjct:   18 DCPDDQYILDAAEEQGIDLPYSCRAGACSTCAGKVAAGSVDQSDQSFLDDSQIGDGFVLTCVAYPTSDCTILTHQEEGL 96          
BLAST of EY664869 vs. ExPASy Swiss-Prot
Match: FER1_NOSMU (Ferredoxin-1 OS=Nostoc muscorum PE=1 SV=2)

HSP 1 Score: 134.035 bits (336), Expect = 4.650e-31
Identity = 60/77 (77.92%), Postives = 70/77 (90.91%), Query Frame = 2
Query:   23 PDDTFILDAAEEAGLDLPYSCRAGACSSCTGKVVSGTVDQSEQSFLDDDQMGEGFVLTCAAYPTSDVTIETHKEEEL 253
            PDD +ILD AE+ GLDLPYSCRAGACS+C GK+VSGTVDQS+QSFLDDDQ+ +G+VLTC AYPTSD+ IETHKEE+L
Sbjct:   22 PDDEYILDIAEDQGLDLPYSCRAGACSTCAGKIVSGTVDQSDQSFLDDDQIEKGYVLTCVAYPTSDLKIETHKEEDL 98          
BLAST of EY664869 vs. ExPASy Swiss-Prot
Match: FER1_MAIZE (Ferredoxin-1, chloroplastic OS=Zea mays GN=FDX1 PE=1 SV=1)

HSP 1 Score: 134.035 bits (336), Expect = 4.650e-31
Identity = 61/79 (77.22%), Postives = 70/79 (88.61%), Query Frame = 2
Query:   23 PDDTFILDAAEEAGLDLPYSCRAGACSSCTGKVVSGTVDQSEQSFLDDDQMGEGFVLTCAAYPTSDVTIETHKEEELAG 259
            PDD +ILD AEE G+DLPYSCRAG+CSSC GKVVSG+VDQS+QS+LDD Q+ +G+VLTC AYPTSDV IETHKEEEL G
Sbjct:   71 PDDVYILDQAEEDGIDLPYSCRAGSCSSCAGKVVSGSVDQSDQSYLDDGQIADGWVLTCHAYPTSDVVIETHKEEELTG 149          
BLAST of EY664869 vs. ExPASy Swiss-Prot
Match: FER1_CYACA (Ferredoxin OS=Cyanidium caldarium GN=petF PE=3 SV=3)

HSP 1 Score: 134.035 bits (336), Expect = 4.650e-31
Identity = 60/79 (75.95%), Postives = 71/79 (89.87%), Query Frame = 2
Query:   17 NCPDDTFILDAAEEAGLDLPYSCRAGACSSCTGKVVSGTVDQSEQSFLDDDQMGEGFVLTCAAYPTSDVTIETHKEEEL 253
            NCP+D +ILDAAEE G+DLPYSCRAGACS+C GK++SGTVDQS+QSFLDD+Q+ EGFVLTC AYPTS+ TI TH+EE L
Sbjct:   20 NCPNDQYILDAAEEQGIDLPYSCRAGACSTCAGKLISGTVDQSDQSFLDDEQIKEGFVLTCVAYPTSNCTILTHQEEAL 98          
BLAST of EY664869 vs. ExPASy Swiss-Prot
Match: FER_SAMNI (Ferredoxin OS=Sambucus nigra PE=1 SV=1)

HSP 1 Score: 133.65 bits (335), Expect = 6.073e-31
Identity = 59/78 (75.64%), Postives = 71/78 (91.03%), Query Frame = 2
Query:   20 CPDDTFILDAAEEAGLDLPYSCRAGACSSCTGKVVSGTVDQSEQSFLDDDQMGEGFVLTCAAYPTSDVTIETHKEEEL 253
            CPDD +IL+ AEE G+D+PYSCRAG+CSSC GK+V+G+VDQS+QSFLDD+Q+ EG+VLTC AYP SDVTIETHKEEEL
Sbjct:   18 CPDDVYILEHAEELGIDIPYSCRAGSCSSCAGKLVAGSVDQSDQSFLDDEQIEEGWVLTCVAYPKSDVTIETHKEEEL 95          
BLAST of EY664869 vs. ExPASy Swiss-Prot
Match: FER_LYCCN (Ferredoxin OS=Lycium chinense PE=1 SV=1)

HSP 1 Score: 132.88 bits (333), Expect = 1.036e-30
Identity = 60/81 (74.07%), Postives = 69/81 (85.19%), Query Frame = 2
Query:   17 NCPDDTFILDAAEEAGLDLPYSCRAGACSSCTGKVVSGTVDQSEQSFLDDDQMGEGFVLTCAAYPTSDVTIETHKEEELAG 259
            +CPDD +ILD AEE G +LPYSCRAG+CSSC GKV +GTVDQS+ +FLDDDQ+ +GFVLTC AYP SDVTIETHKEE L G
Sbjct:   17 DCPDDVYILDQAEEEGHELPYSCRAGSCSSCAGKVSAGTVDQSDGNFLDDDQIADGFVLTCVAYPQSDVTIETHKEEALTG 97          
BLAST of EY664869 vs. ExPASy Swiss-Prot
Match: FER_SOLAB (Ferredoxin OS=Solanum abutiloides PE=1 SV=1)

HSP 1 Score: 132.494 bits (332), Expect = 1.353e-30
Identity = 59/78 (75.64%), Postives = 68/78 (87.18%), Query Frame = 2
Query:   20 CPDDTFILDAAEEAGLDLPYSCRAGACSSCTGKVVSGTVDQSEQSFLDDDQMGEGFVLTCAAYPTSDVTIETHKEEEL 253
            CPDD +ILD AEE G DLPYSCRAG+CSSC GK+ +G+VDQS+ +FLDDDQ+ +GFVLTC AYP SDVTIETHKEEEL
Sbjct:   18 CPDDEYILDRAEEEGHDLPYSCRAGSCSSCAGKIAAGSVDQSDGNFLDDDQIADGFVLTCVAYPQSDVTIETHKEEEL 95          
The following BLAST results are available for this feature:
BLAST of EY664869 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 110
Match NameE-valueIdentityDescription
FER1_ANAVT3.561e-3179.22Ferredoxin-1 OS=Anabaena variabilis (strain ATCC 2... [more]
FER_THAWE4.650e-3175.95Ferredoxin OS=Thalassiosira weissflogii GN=petF PE... [more]
FER_SPIPL4.650e-3175.95Ferredoxin OS=Spirulina platensis PE=1 SV=2[more]
FER_GUITH4.650e-3175.95Ferredoxin OS=Guillardia theta GN=petF PE=3 SV=3[more]
FER1_NOSMU4.650e-3177.92Ferredoxin-1 OS=Nostoc muscorum PE=1 SV=2[more]
FER1_MAIZE4.650e-3177.22Ferredoxin-1, chloroplastic OS=Zea mays GN=FDX1 PE... [more]
FER1_CYACA4.650e-3175.95Ferredoxin OS=Cyanidium caldarium GN=petF PE=3 SV=... [more]
FER_SAMNI6.073e-3175.64Ferredoxin OS=Sambucus nigra PE=1 SV=1[more]
FER_LYCCN1.036e-3074.07Ferredoxin OS=Lycium chinense PE=1 SV=1[more]
FER_SOLAB1.353e-3075.64Ferredoxin OS=Solanum abutiloides PE=1 SV=1[more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-071-D07-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY664869 ID=EY664869; Name=EY664869; organism=Citrus sinensis; type=EST; length=557bp
CCACGCGTCCGGAAATAACTGTCCTGATGACACGTTTATTCTTGATGCTG
CTGAAGAAGCTGGGCTTGATCTTCCGTACTCATGCAGGGCTGGGGCTTGC
TCTTCCTGTACTGGGAAAGTTGTGTCTGGAACCGTTGACCAGTCGGAGCA
AAGCTTTCTGGATGATGATCAAATGGGAGAAGGTTTTGTTCTCACTTGTG
CTGCTTATCCAACAAGTGATGTTACTATAGAGACTCACAAGGAAGAGGAG
CTCGCTGGTTAATAATGTGCTCTTGATATCTCATTATTATCTTCTCTTTT
ATGTGTTGTGTTTTGTCTGATTATTTTAATGCTTTGAAAGGGATATTGAG
TAATTTGAGAATGATTCTTGTAATGTGTTTTTATTTCTTGTTGCAAAGAA
GTTGTAATTGCACCGGCCATGAATGCGCATCGTACCTAGAGGGTGAGGTT
TCTCATCCCATCCGAACATGGTACCGTTCTATAATTAAGAGTCAAGCAAG
AACAATGGATCTTTCGTTGTATTTCATCGGTAAAAAAAAAAAAAAAAAAA
AAAAAAA
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